; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G010490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:12378026..12397964
RNA-Seq ExpressionLsi04G010490
SyntenyLsi04G010490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600899.1 hypothetical protein SDJN03_06132, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2578.38Show/hide
Query:  LSWRYQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCSEIRDGKCFSDLPTPRFDMSVSFTSWMMLHL
        LSWRYQ RIPVLP+TSC NFHG KLAV++S +ANF P VGVSCSEIRDGKC  D PT R D SVSFTSWMMLHL
Subjt:  LSWRYQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCSEIRDGKCFSDLPTPRFDMSVSFTSWMMLHL

KAG7030640.1 hypothetical protein SDJN02_04677, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-4571.43Show/hide
Query:  ALEYRSRNQALGFISANLDGFLDATSLPSELSWRYQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCSEIRDGKCFSDLPTPRFDMSVSFTSWM
        ALEYRSRNQALGFISA+ DGFL+ATSLPSELSWRYQFRIP    T CSNFHG KLAV VSPTAN  PGVGVSC EIRDGK FSD PTPRFD S+SFTS M
Subjt:  ALEYRSRNQALGFISANLDGFLDATSLPSELSWRYQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCSEIRDGKCFSDLPTPRFDMSVSFTSWM

Query:  MLHLL--SFLSVRTEILERGKVNWESDYL-DHWHQERIEN
        MLHLL   +   + + LERGKVNW+SD L     +E+++N
Subjt:  MLHLL--SFLSVRTEILERGKVNWESDYL-DHWHQERIEN

KAG7031533.1 hypothetical protein SDJN02_05574, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-0562.5Show/hide
Query:  YQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCS
        YQ R+  LP+T+CSNFHG KL + VSPTAN  PG GV+ S
Subjt:  YQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCGCTCGAGTATCGGTCCCGGAACCAAGCTCTAGGGTTTATCAGCGCAAATCTTGATGGTTTCCTCGATGCCACCTCTTTGCCGTCGGAACTGTCGTGGAGGTA
CCAGTTTAGGATTCCGGTGTTGCCGTACACCAGCTGCTCGAACTTCCATGGCCTCAAGCTTGCAGTTGCGGTCTCTCCGACTGCTAATTTTATGCCTGGAGTTGGTGTGA
GTTGCAGTGAGATTCGTGATGGGAAGTGCTTTTCGGATCTTCCGACTCCTCGTTTCGACATGAGCGTATCGTTCACGAGTTGGATGATGTTGCACCTACTCTCTTTTCTC
TCTGTGAGGACAGAGATTCTAGAGCGTGGAAAAGTCAATTGGGAAAGTGATTATCTAGACCATTGGCATCAAGAAAGAATAGAAAACGGGAAAGAACACGATAAGTTCGG
ATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCGCTCGAGTATCGGTCCCGGAACCAAGCTCTAGGGTTTATCAGCGCAAATCTTGATGGTTTCCTCGATGCCACCTCTTTGCCGTCGGAACTGTCGTGGAGGTA
CCAGTTTAGGATTCCGGTGTTGCCGTACACCAGCTGCTCGAACTTCCATGGCCTCAAGCTTGCAGTTGCGGTCTCTCCGACTGCTAATTTTATGCCTGGAGTTGGTGTGA
GTTGCAGTGAGATTCGTGATGGGAAGTGCTTTTCGGATCTTCCGACTCCTCGTTTCGACATGAGCGTATCGTTCACGAGTTGGATGATGTTGCACCTACTCTCTTTTCTC
TCTGTGAGGACAGAGATTCTAGAGCGTGGAAAAGTCAATTGGGAAAGTGATTATCTAGACCATTGGCATCAAGAAAGAATAGAAAACGGGAAAGAACACGATAAGTTCGG
ATAG
Protein sequenceShow/hide protein sequence
MTALEYRSRNQALGFISANLDGFLDATSLPSELSWRYQFRIPVLPYTSCSNFHGLKLAVAVSPTANFMPGVGVSCSEIRDGKCFSDLPTPRFDMSVSFTSWMMLHLLSFL
SVRTEILERGKVNWESDYLDHWHQERIENGKEHDKFG