; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G010750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglutelin type-B 5-like
Genome locationchr04:12919120..12919917
RNA-Seq ExpressionLsi04G010750
SyntenyLsi04G010750
Gene Ontology termsGO:0045735 - nutrient reservoir activity (molecular function)
InterPro domainsIPR006044 - 11-S seed storage protein, plant
IPR006045 - Cupin 1
IPR011051 - RmlC-like cupin domain superfamily
IPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150394.1 glutelin type-D 1 [Cucumis sativus]7.1e-6789.58Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

XP_008461502.1 PREDICTED: glutelin type-B 5-like [Cucumis melo]7.1e-6789.58Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

XP_022976927.1 glutelin type-D 1-like [Cucurbita maxima]1.6e-6688.89Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIV+GSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

XP_023535755.1 glutelin type-D 1-like [Cucurbita pepo subsp. pepo]1.6e-6688.89Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIV+GSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

XP_038897477.1 glutelin type-D 1-like [Benincasa hispida]2.1e-6688.89Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSA QVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

TrEMBL top hitse value%identityAlignment
A0A0A0K666 Uncharacterized protein3.4e-6789.58Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

A0A1S3CG59 glutelin type-B 5-like3.4e-6789.58Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

A0A5A7UAB0 Glutelin type-B 5-like3.4e-6789.58Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIVKGSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

A0A6J1EX25 glutelin type-D 1-like1.7e-6688.19Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIV+GSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSII+TPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

A0A6J1IH21 glutelin type-D 1-like7.6e-6788.89Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K EHRN MALNCEE PLDVDVKNGGRVVVLN+KNLPLVG+VGLGADLVRLD S MCSPGFSCDSALQVTYIV+GSGR EVVG+DGKK LETRVK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIG+ K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

SwissProt top hitse value%identityAlignment
O23878 13S globulin seed storage protein 16.7e-1229.6Show/hide
Query:  DVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEGME
        DV     GR+  +NS NLP++  + L A  V L ++ +  P ++  +A    Y+ +G GRV+VVG +G+   +  V+ G + +VP+ F V      EG+E
Subjt:  DVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEGME

Query:  WFSIISTPNPVFTHLAGSIGLVKLV
        W  + +  N + + +AG   +++ +
Subjt:  WFSIISTPNPVFTHLAGSIGLVKLV

P07730 Glutelin type-A 26.7e-1232.76Show/hide
Query:  GRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEGMEWFSIIST
        GRV  LNS+N P++  V + A  V L ++ + SP ++  +A  + YI +G  +V+VV  +GK      ++ G L IVP+ +VV K    EG  + +  + 
Subjt:  GRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEGMEWFSIIST

Query:  PNPVFTHLAGSIGLVK
        PN + +H+AG   + +
Subjt:  PNPVFTHLAGSIGLVK

P12615 12S seed storage globulin 13.9e-1230.5Show/hide
Query:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG
        E P   D  N   GR+  LNSKN P +  V + A  V L ++ + SP ++  +A  V ++++G  RV+VV   G+      ++ G L I+P+ +VV K  
Subjt:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG

Query:  DPEGMEWFSIISTPNPVFTHLAGSIGLVKLVLYPYLSSLPR
        + EG ++ S  +TPN + +++AG   +++ +    L++  R
Subjt:  DPEGMEWFSIISTPNPVFTHLAGSIGLVKLVLYPYLSSLPR

P14614 Glutelin type-B 41.5e-1134.96Show/hide
Query:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG
        E P   D  N   GR+  LNS+  P++  V L A  V L ++ + SP ++  +A  + YIV+G  RV+VV   GK      ++ G L I+P+ +VV K  
Subjt:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG

Query:  DPEGMEWFSIISTPNPVFTHLAG
        + EG ++ S  +  N + +HLAG
Subjt:  DPEGMEWFSIISTPNPVFTHLAG

Q6ERU3 Glutelin type-B 51.5e-1134.96Show/hide
Query:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG
        E P   D  N   GR+  LNS+  P++  V L A  V L ++ + SP ++  +A  + YIV+G  RV+VV   GK      ++ G L I+P+ +VV K  
Subjt:  EVPLDVDVKN--GGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIG

Query:  DPEGMEWFSIISTPNPVFTHLAG
        + EG ++ S  +  N + +HLAG
Subjt:  DPEGMEWFSIISTPNPVFTHLAG

Arabidopsis top hitse value%identityAlignment
AT1G07750.1 RmlC-like cupins superfamily protein5.4e-5771.53Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K E+R    LNC E PLDVD+K+GGRVVVLN+KNLPLVG+VG GADLVR+D   MCSPGFSCDSALQVTYIV GSGRV+VVG DGK+ LET +K G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
        +LFIVPRFFVVSKI D +GM WFSI++TP+P+FTHLAG+  + K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK

AT2G28490.1 RmlC-like cupins superfamily protein1.5e-0633.78Show/hide
Query:  GLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEG
        G+G  LV L    M +P  +  +A +   ++ GSG ++VV  +G   + TRV VG++F +PR+F   +I    G
Subjt:  GLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFVVSKIGDPEG

AT2G28680.1 RmlC-like cupins superfamily protein3.0e-5570.14Show/hide
Query:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG
        MP+ K   R    LNC E PLDVD+K+GGRVVVLN+KNLPLVG+VG GADLVR+D   MCSPGFSCDSALQVTYIV GSGRV++VG DGK+ LET VK G
Subjt:  MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVG

Query:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK
         LFIVPRFFVVSKI D +G+ WFSI++TP+P+FTHLAG   + K
Subjt:  NLFIVPRFFVVSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAGGCGAAGAATGAGCATAGAAATAGAATGGCGCTGAACTGCGAGGAGGTGCCACTAGATGTGGATGTGAAGAACGGAGGACGAGTTGTGGTTTTGAACTCGAA
GAATCTACCGTTAGTAGGGAAGGTAGGATTGGGAGCAGATTTGGTCCGATTGGACAGAAGTGTGATGTGCTCACCTGGATTCTCTTGTGATTCGGCGCTGCAAGTGACTT
ATATTGTGAAAGGCAGCGGAAGAGTGGAGGTTGTAGGAATGGACGGGAAGAAGGATTTGGAAACGAGAGTGAAAGTTGGAAATTTGTTCATAGTACCAAGGTTTTTCGTG
GTATCGAAGATCGGAGATCCTGAAGGAATGGAGTGGTTCTCTATTATCAGCACTCCCAATCCTGTTTTCACTCATTTGGCTGGCAGCATCGGTCTCGTGAAATTAGTTTT
GTATCCGTATCTCTCATCACTTCCTCGTAAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAGGCGAAGAATGAGCATAGAAATAGAATGGCGCTGAACTGCGAGGAGGTGCCACTAGATGTGGATGTGAAGAACGGAGGACGAGTTGTGGTTTTGAACTCGAA
GAATCTACCGTTAGTAGGGAAGGTAGGATTGGGAGCAGATTTGGTCCGATTGGACAGAAGTGTGATGTGCTCACCTGGATTCTCTTGTGATTCGGCGCTGCAAGTGACTT
ATATTGTGAAAGGCAGCGGAAGAGTGGAGGTTGTAGGAATGGACGGGAAGAAGGATTTGGAAACGAGAGTGAAAGTTGGAAATTTGTTCATAGTACCAAGGTTTTTCGTG
GTATCGAAGATCGGAGATCCTGAAGGAATGGAGTGGTTCTCTATTATCAGCACTCCCAATCCTGTTTTCACTCATTTGGCTGGCAGCATCGGTCTCGTGAAATTAGTTTT
GTATCCGTATCTCTCATCACTTCCTCGTAAAACATAA
Protein sequenceShow/hide protein sequence
MPKAKNEHRNRMALNCEEVPLDVDVKNGGRVVVLNSKNLPLVGKVGLGADLVRLDRSVMCSPGFSCDSALQVTYIVKGSGRVEVVGMDGKKDLETRVKVGNLFIVPRFFV
VSKIGDPEGMEWFSIISTPNPVFTHLAGSIGLVKLVLYPYLSSLPRKT