CuGenDBv2

Gene ID	Lsi04G010810
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	EAF domain-containing protein
Genome location	chr04:12995511..12999467
RNA-Seq Expression	Lsi04G010810
Synteny	Lsi04G010810
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579241.1 Ell-associated factor Eaf, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-143

69.46

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAVKQLRHLRQPGES+AAA A             A+ST+AS +HSLTPPEPRLSPP AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AK  VASKG  DYSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        AEGRD+QSSSSSSS SGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_008454810.1 PREDICTED: ELL-associated factor 2 [Cucumis melo]

1.0e-139

69.3

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYA
        RLERLHRAV QLRHLRQPGESAAAAA ATAT TTAGVAAPAAT ++ASVLHSLTPPEPRLSPPV KV+KPMHMGR SFPTMPVEVERIDIGEPGN G   
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYA

Query:  NLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP
                                                                                          AK  VASKG+TDYSSDPP
Subjt:  NLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP

Query:  NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQV
        N S SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR             
Subjt:  NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQV

Query:  NAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
              +QSSSSSSSGSGSGSSSGSSS SSDSEGSDEDSVTSI
Subjt:  NAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

6.9e-144

69.91

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAVKQLRHLRQPGES+AAA A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AK  VASKG  DYSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        AEGRD+QSSSSSSS SGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

5.2e-144

69.91

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAVKQLRHLRQPGES+AA  A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AKS VASKG  DYSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        AEGRD+QSSSSSSS SGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

1.3e-158

76.13

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTT--ASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQY
        RLERLHRAVKQLRHLRQPGESAAAAAA A  TT GVAAPA TST+  AS LHSLTPPEPRLSPPVAKV+KPMHMGRGSFPTMPVEVERIDIGEPGNTG  
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTT--ASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQY

Query:  ANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDP
                                                                                           AKS VASKG+ DYSSDP
Subjt:  ANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDP

Query:  PNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQ
        PNVSASSPG+K DDEHQDI IDD+FGS+ SDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQ
Subjt:  PNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQ

Query:  VNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        V+AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
Subjt:  VNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

2.3e-137

69.23

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAV QLRHLRQPGESAAA A  A ATTAGVAAPAA  TTASVLHSLTPPEPRLSPPV KVSKPMHMGR SFPTMPVEVERIDIGEPGN G    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AK+ VASKG+T+YSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VS SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVE GFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR              
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
             +QSSSSSSSGSGSGSSSGSSS SSDSE SDEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

5.0e-140

69.3

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTK G LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYA
        RLERLHRAV QLRHLRQPGESAAAAA ATAT TTAGVAAPAAT ++ASVLHSLTPPEPRLSPPV KV+KPMHMGR SFPTMPVEVERIDIGEPGN G   
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAA-ATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYA

Query:  NLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP
                                                                                          AK  VASKG+TDYSSDPP
Subjt:  NLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPP

Query:  NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQV
        N S SSPG+K DDEHQDI IDDIFGS+SSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR             
Subjt:  NVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQV

Query:  NAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
              +QSSSSSSSGSGSGSSSGSSS SSDSEGSDEDSVTSI
Subjt:  NAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1DE82 ELL-associated factor 1

9.7e-120

61.49

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MAN+NKEEPKTAPQ +RWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTK GSLKKTK+NRVTVEFQNNQ G+PNVAFVGSSED KENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAV  LRH+RQ  ES                  A TS T SV HSLT PEPRLSPPVAKV+KPMHMGR SFP +PVEVERIDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         A S  ASK + DY+SDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSA--SSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQ
        VSA   SPG+  DDEHQDI ID+IFGS+SSDDGNN EEE+++ GFDIN+PH NDTDDEIADVDDSGDEA+KGPNAAE                  ALRAQ
Subjt:  VSA--SSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQ

Query:  VNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        VNAEGRD Q+SSSSSS SGSGSSSGSSSGSSDSE SDEDSVTSI
Subjt:  VNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

3.3e-144

69.91

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAVKQLRHLRQPGES+AAA A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AK  VASKG  DYSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        AEGRD+QSSSSSSS SGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

2.5e-144

69.91

Show/hide

Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        MANNNKEEPKTAPQPDRWY+LSLGPSF +ESSNKFCTLRYEFKPASIDKTK GSLKKTKENRVT+EFQNNQ GKPNVAFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAVKQLRHLRQPGES+AA  A            AA+ST+AS LHSLTPPEPRLSPP AKV KPMHMGRGSFP++ VEVE+IDIGEPGNTG    
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                                         AKS VASKG  DYSSDPPN
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
        VSA SPG K DDEHQDI IDDIFGS+SSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVN

Query:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI
        AEGRD+QSSSSSSS SGSGSSSGSSSGSSDSEG+DEDSVTSI
Subjt:  AEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVTSI

SwissProt top hits

e value

%identity

Alignment

B4HQT6 Ell-associated factor Eaf

1.0e-04

30.85

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Query:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVK
        L LG +F  + +S  F T++Y+FKPAS+D ++  S+     N+VTV   N++  G P+  + G+  +Y + + ++ +D ET    +E+L+  ++
Subjt:  LSLGPSFKDE-SSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQ-FGKPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVK

Q5ZHP7 ELL-associated factor 2

5.9e-05

35.92

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Query:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERLHRAVKQLRHLRQP
        L LG +F+ +    F T+RY+FKPASID    G L+  K  +VT+   N +   P V  F GS + Y KE   ++  D    RLE+L   +  ++ +R  
Subjt:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERLHRAVKQLRHLRQP

Query:  GES
        G S
Subjt:  GES

Q91ZD6 ELL-associated factor 2

2.6e-05

40.23

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Query:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERL
        L LG SF+ +    F T+RY+FKPASID +  G+L+  K  +VT+   N +   P V  F GS   Y KE   ++  D    RLE+L
Subjt:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERL

Q96CJ1 ELL-associated factor 2

5.9e-05

39.08

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Query:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERL
        L LG SF+ +    F T+RY+FKPASID +  G L+  +  +VT+   N +   P V  F GS + Y KE   ++  D    RLE+L
Subjt:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDY-KENDAVLFFDGETFRLERL

Q9D4C5 ELL-associated factor 1

5.0e-04

34.26

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Query:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLRQ
        L LG SF+      F T+RY+FKPASID +  G L+  K + VT+   +     P +  F G+   Y + D VL  + +T  + LE+L  ++ Q++  R 
Subjt:  LSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNV-AFVGSSEDYKENDAVLFFDGET--FRLERLHRAVKQLRHLRQ

Query:  PGESAAAA
         G S   A
Subjt:  PGESAAAA

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

1.2e-61

41.48

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Query:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF
        M+N++++EP TAP+ D+WY+L LG S KD+SS+KFCTLRYEFKPASIDK +SGS+ K K+NRV+VEFQNNQ GKP V F GSSEDYKE+DAVLFFDGE F
Subjt:  MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN
        RLERLHRAV QLRH+R PGESAAA+                         S  P E RLS PV + +K   + R   P +PVEVERI+IG+P N+ + AN
Subjt:  RLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYAN

Query:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN
                                                                          +P                  A+  + D + D   
Subjt:  LLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPN

Query:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA
                   DEHQ+I + +IFGS + ++ +NAE+E  + G  +   ++  + T++EIADV DDSG E EKG NAAEALRAQVNAE ++  T++++  +
Subjt:  VSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRA

Query:  QVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGS-DEDSVTSI
          ++    D  S S SSGSGSG  S S S S  S GS DED V S+
Subjt:  QVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

5.6e-35

32.95

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Query:  NNNKEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDY--KENDAVLFFDG
        +N+ EEPK AP+P+RWYN++LGP+  + +   S KFCTLRYEFKPASID TK G L K+K+N+VT+EFQNNQ  KP V F G SEDY  ++ DA+LFFDG
Subjt:  NNNKEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDY--KENDAVLFFDG

Query:  ETFRLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQ
        E FRLE+LHR+VK+L+ LR P ESA+A+                                ++ PPV K               PV++  IDI  P     
Subjt:  ETFRLERLHRAVKQLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQ

Query:  YANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSD
                                                                                                            
Subjt:  YANLLVCICVLIDDVRAVLCLVGMDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSD

Query:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAA
                      D  +D++I+D       ++      +  +TG    DIN+PH  +  DDEIA VD + DE+ KG NAAEALRAQVNAE RE      
Subjt:  PPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAA

Query:  ALRAQVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEG
        + ++  +  GR+ +SS S    SGSGSSS S S  S SEG
Subjt:  ALRAQVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAACAACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCAC
TCTTCGATATGAATTTAAGCCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGA
AACCCAATGTGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAG
CAGCTTCGTCACCTTCGACAGCCAGGTGAATCTGCTGCTGCGGCTGCTGCCACTGCCACTGCCACTACCGCTGGCGTGGCTGCCCCCGCTGCCACATCTACCACTGCTTC
TGTCCTTCATTCTTTGACGCCACCGGAGCCTCGGTTATCTCCGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTAGAGG
TGGAAAGAATAGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTAATCTGTTAGTCTGCATCTGTGTACTTATAGATGATGTGAGAGCAGTTTTATGCCTCGTAGGG
ATGGATCTTAGATTCTTAAGATGTAATGTCGTCTGCAAGTTTCAGTCCTTACGGGCCTCTTGCATCATTCCTAACAGGATAAACCGGATGTTGAAATCTTGTTCGCTGGA
TGTCTTTCGCTTTATTTGTAAGAACGCCATTCCTCCCAGAAATAAGTACACATTTTTCGGATATTCAGATTGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATT
ACTCATCAGATCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATGAGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGAT
GGAAATAATGCTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACATCAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGC
TGAGAAAGGGCCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAGGGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGGTTAATGCAGAGGGTA
GGGACGACCAGAGCTCGAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGTGATGAGGATTCGGTTACC
TCAATCTGA

mRNA sequence

Show/hide mRNA sequence

CAAAAACCCTAATCTTTTTCCAAGGATAATACGTTTTTCTTTCTCATTCTCTTCATCTCCTTCTTCGTCTATCGTCAGCATCCACAGCTGACGGGTTCTCTCTCTCGCTC
TCCTAGTCGCAGGTCACCGCCGTCCAGTCGACGCCGTCGTGGGTTAGGCAAAATCCGCGCGCAACATCAGTCCGGCTGCCCTGTCTTTTCTCTGTTTCGGCGTTCGTTTG
TGTAACCCACGACCTATTGGACCTTGAATCGACTTACCGTTCGATCTCTCAATTTTTGCGCAATTTGGAACACTGTACAGCAACGGATTGAGTTCTCTTTGTGAATTTTC
ATGGTTTCAGCTTGAAAAGATTCGTTAGTTCCGGACTGTCCATTCGAGGTCGAAAGGCGACTTCGAATCAGAAATTTCTTGATAAATATTTGAATCAGCAATGGCAAACA
ACAATAAAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCTCTTGGTCCTTCATTCAAGGATGAATCCTCCAACAAATTTTGCACTCTTCGATAT
GAATTTAAGCCGGCGTCAATTGATAAAACGAAGTCGGGATCGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAGAACAATCAATTTGGGAAACCCAATGT
GGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCTGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGTC
ACCTTCGACAGCCAGGTGAATCTGCTGCTGCGGCTGCTGCCACTGCCACTGCCACTACCGCTGGCGTGGCTGCCCCCGCTGCCACATCTACCACTGCTTCTGTCCTTCAT
TCTTTGACGCCACCGGAGCCTCGGTTATCTCCGCCAGTGGCTAAAGTTTCCAAACCTATGCATATGGGTCGGGGCAGTTTTCCAACGATGCCGGTAGAGGTGGAAAGAAT
AGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTAATCTGTTAGTCTGCATCTGTGTACTTATAGATGATGTGAGAGCAGTTTTATGCCTCGTAGGGATGGATCTTA
GATTCTTAAGATGTAATGTCGTCTGCAAGTTTCAGTCCTTACGGGCCTCTTGCATCATTCCTAACAGGATAAACCGGATGTTGAAATCTTGTTCGCTGGATGTCTTTCGC
TTTATTTGTAAGAACGCCATTCCTCCCAGAAATAAGTACACATTTTTCGGATATTCAGATTGTGCAAAATCTGGTGTTGCTAGTAAAGGGATTACGGATTACTCATCAGA
TCCACCAAATGTATCTGCTTCCTCTCCTGGCGTGAAGTATGATGATGAGCATCAAGATATACATATTGATGATATTTTTGGGTCTCTTTCATCTGATGATGGAAATAATG
CTGAAGAAGAAAGAGTTGAGACTGGATTCGATATAAATATACCACATCAAAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGCGACGAAGCTGAGAAAGGG
CCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCTGAGGGTAGGGAGGGACCTACTGCAGCAGCTGCCCTCAGAGCTCAGGTTAATGCAGAGGGTAGGGACGACCA
GAGCTCGAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATCTGAT
GGAAATGAAGCTGAAGAAATCTTGAGGTTTGAGAAGCCGTCTACTGATGAGATCTTGAGCTTTGAGTAAGACTGTCAAAGTTCACACTTCATTGTGGTTCATACATAATT
TTTCTAATGGAAGTTGAGTTTTTATTTCCGTATAAAAATTGTCGTGATGGAAATCAAACCACCGATCAAGAAGGGGGTGCATGCCAATTCTCGCTGAGCTAAGCTTATTT
TGGCATTGAGGGTTGATTTGAATGCTAATAATTTAATTGTAACATAATTTTCAAATATAGTGATTTTGGTTCATGAGGTTCAATTCTACTGATGCAGGGTTTTATCTTTT
GATTCAAATTTAGGACTTCTTAGCAGTAAAGAATAAATTTTGGGTAAAATTATACTTTTG

Protein sequence

Show/hide protein sequence

MANNNKEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTLRYEFKPASIDKTKSGSLKKTKENRVTVEFQNNQFGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVK
QLRHLRQPGESAAAAAATATATTAGVAAPAATSTTASVLHSLTPPEPRLSPPVAKVSKPMHMGRGSFPTMPVEVERIDIGEPGNTGQYANLLVCICVLIDDVRAVLCLVG
MDLRFLRCNVVCKFQSLRASCIIPNRINRMLKSCSLDVFRFICKNAIPPRNKYTFFGYSDCAKSGVASKGITDYSSDPPNVSASSPGVKYDDEHQDIHIDDIFGSLSSDD
GNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDDQSSSSSSSGSGSGSSSGSSSGSSDSEGSDEDSVT
SI

Lsi04G010810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome