; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G010900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDifferentiation-associated protein 1, putative isoform 2
Genome locationchr04:13121095..13123579
RNA-Seq ExpressionLsi04G010900
SyntenyLsi04G010900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035851.1 uncharacterized protein E6C27_scaffold56G00140 [Cucumis melo var. makuwa]1.9e-10388.43Show/hide
Query:  KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNES
        +K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NES
Subjt:  KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNES

Query:  SSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW
        SSQ  EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGW
Subjt:  SSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW

Query:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        TFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

XP_004148180.1 uncharacterized protein LOC101222663 [Cucumis sativus]7.2e-10387.97Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESS
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
        SQ  EASNGQ+LSSEQN DT SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT

Query:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNEY
Subjt:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

XP_008454805.1 PREDICTED: uncharacterized protein LOC103495120 isoform X1 [Cucumis melo]1.9e-10388.8Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESS
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
        SQ  EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGWT
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT

Query:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

XP_008454806.1 PREDICTED: uncharacterized protein LOC103495120 isoform X2 [Cucumis melo]3.2e-10389.12Show/hide
Query:  QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQ
        QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ
Subjt:  QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQ

Query:  SPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQ
          EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGWTFQ
Subjt:  SPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQ

Query:  FPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  FPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

XP_038893385.1 uncharacterized protein LOC120082191 [Benincasa hispida]1.7e-10790.87Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        KLQVTY+NVSR SFS VRKSTSF G YGT+RG  K+RR GLS SLAATGSNQVDTDTNEKGS ITGRTLSNDNSSA SQSPSDASA+NGISQLNVT++SS
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
        SQS EASNGQVLSS+QN DT SSPDLQSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMP+PGWT
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT

Query:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Subjt:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

TrEMBL top hitse value%identityAlignment
A0A0A0KM52 Uncharacterized protein3.5e-10387.97Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        KLQVTYKNVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSND+SSA SQ PS+ASAENGISQLNV NESS
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
        SQ  EASNGQ+LSSEQN DT SSPD Q TKKS LTARERLRAARVL+RYNESKTSKSDM SKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT

Query:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FQFPGGSDLF I FSFVFIS+VMFATTY+VWKVGAIHFNEY
Subjt:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

A0A1S3BYZ3 uncharacterized protein LOC103495120 isoform X19.2e-10488.8Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESS
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT
        SQ  EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGWT
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWT

Query:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  FQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

A0A1S3BZJ0 uncharacterized protein LOC103495120 isoform X21.6e-10389.12Show/hide
Query:  QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQ
        QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NESSSQ
Subjt:  QVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQ

Query:  SPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQ
          EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGWTFQ
Subjt:  SPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQ

Query:  FPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        FPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  FPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

A0A5D3E421 Uncharacterized protein9.2e-10488.43Show/hide
Query:  KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNES
        +K QVTY+NVSR SF  VRKSTS CGTY T RGIAKERR GLS SLAATGSNQVDT+TNEKGS ITGRTLSNDNSSA SQSPS+AS+ENGISQLNV NES
Subjt:  KKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNES

Query:  SSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW
        SSQ  EASNGQVLSS QN DT SSPD QSTKKSPLTARERLRAARVL+RYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAP NLFDDSKRGMPKPGW
Subjt:  SSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW

Query:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        TFQFPGGSDLF I FSFVFISTVMFATTYIVWKVG IHFNEY
Subjt:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

A0A6J1CZJ1 uncharacterized protein LOC1110159201.2e-9080.99Show/hide
Query:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS
        KLQ T +N+SR SF KV K T+F GTYGT RGIAKERR GLS SLAA GSNQVDTDTNEKGSGITGRTL +D+SSA +Q P DASAE+ +SQL+V N  S
Subjt:  KLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESS

Query:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRY-NESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW
        S   EASNGQ LSS Q+  T SSPD QST+KSPLTARERLRAARVL+RY NESK SKSDMGSKVLEA+RE+D+GKKR+RLPEAPTNLFDDSKRGMPKPGW
Subjt:  SQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRY-NESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGW

Query:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
        TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY
Subjt:  TFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNEY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56010.1 unknown protein1.6e-3652.87Show/hide
Query:  SNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNES--KTSKSDMGSKVLEAI
        +NDNS  ++   S +S++        +N+  S+S E+SNG                  + KK+PLTARERLRAARVL+RY E+  K SK  MGS++L+ +
Subjt:  SNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASNGQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNES--KTSKSDMGSKVLEAI

Query:  RESD-RGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE
        +ESD + K++  LPEAPTN+ DDS+RGMPK G TF  PGGSD+ +IAFSFVFISTVMFATT++VWK+GAIHFNE
Subjt:  RESD-RGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVFISTVMFATTYIVWKVGAIHFNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAA
GGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATG
ACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAAC
GGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGT
TCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAG
CGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTC
ATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTTGCAAGTCACTTACAAGAACGTTTCACGATTCTCATTTTCGAAGGTCAGAAAATCGACGTCCTTCTGTGGGACGTATGGCACAATGAGAGGAATTGCAAA
GGAGAGAAGACCAGGATTGTCTTTCTCACTTGCAGCTACAGGCAGCAACCAGGTAGACACAGACACCAATGAGAAGGGTTCTGGAATTACTGGAAGAACTCTTTCTAATG
ACAATTCCTCAGCTTCGAGTCAATCACCTTCAGATGCTTCAGCAGAGAATGGAATCTCTCAACTCAATGTTACCAATGAGTCTTCTTCTCAATCACCTGAGGCTTCCAAC
GGACAAGTATTGTCTTCAGAACAGAATGTAGATACAGGTTCATCACCTGATTTACAATCCACAAAAAAATCTCCATTAACTGCAAGAGAAAGACTAAGGGCAGCTCGTGT
TCTTAACCGTTACAACGAATCAAAGACCTCCAAGTCTGACATGGGCAGCAAAGTATTGGAAGCGATACGAGAGAGTGATCGTGGGAAGAAAAGGTCGAGGCTTCCAGAAG
CGCCTACTAATTTGTTCGATGATAGCAAGCGAGGGATGCCAAAACCAGGCTGGACGTTTCAGTTCCCGGGCGGTTCGGATCTTTTTGTCATTGCCTTTTCGTTCGTTTTC
ATTAGTACAGTGATGTTTGCTACCACCTACATTGTGTGGAAAGTTGGTGCAATTCATTTTAATGAGTACTGAAGTGGACTGCAAAGAGGTCAATCTCTCAAAAAGCTGCC
CCCTATCCTGCTAGAAATAGTTCTTTGATCTTCTTTTGCTATATGGTACACTTGGATGCTCATCTTTTGCTAGATGCCATACTCAGTAATGCTTGCATAGTCTTGAATGT
ACAAAAGCTTTTTGCTCAACATTTTGATTAGTGTAATATTGATTTTGTTTTTGAATCTTTGGACTCGTTTGATATCATTTGGAAAATTATGTAAAAATAAGTTGCAGATT
AGATTATCGTTTTG
Protein sequenceShow/hide protein sequence
MKKLQVTYKNVSRFSFSKVRKSTSFCGTYGTMRGIAKERRPGLSFSLAATGSNQVDTDTNEKGSGITGRTLSNDNSSASSQSPSDASAENGISQLNVTNESSSQSPEASN
GQVLSSEQNVDTGSSPDLQSTKKSPLTARERLRAARVLNRYNESKTSKSDMGSKVLEAIRESDRGKKRSRLPEAPTNLFDDSKRGMPKPGWTFQFPGGSDLFVIAFSFVF
ISTVMFATTYIVWKVGAIHFNEY