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Lsi04G010950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCRAL-TRIO domain-containing protein
Genome locationchr04:13248211..13249166
RNA-Seq ExpressionLsi04G010950
SyntenyLsi04G010950
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR036273 - CRAL/TRIO, N-terminal domain superfamily
IPR036865 - CRAL-TRIO lipid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142262.1 sec14 cytosolic factor isoform X1 [Cucumis sativus]2.5e-4282.57Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        ME S ANAVIQLR+S+ K GFS QD SDATMMRFLIARSME+ KA KMFVQW+KWRDA VPKG I+ESEVEDELKAKKIFLQG+SI QLPVMIV+ANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        HSKDQ+QFK
Subjt:  HSKDQLQFK

XP_008452419.1 PREDICTED: sec14 cytosolic factor-like [Cucumis melo]3.4e-4485.32Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANAV  LRNS+EK GFS QD SDATMMRFLIARSME+SKA KMFVQW+KWRDA VPKG+I+ESEVEDELKAKKIFLQG+SI QLPVMIV+ANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        HSKDQLQFK
Subjt:  HSKDQLQFK

XP_022941639.1 sec14 cytosolic factor-like isoform X2 [Cucurbita moschata]2.0e-3676.15Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANA+IQ+R +VEK G + Q+  DATMMRFLIARSME SK  KMFVQWRKWRDA+VPKGFISESEV++EL+AKKIFLQGLS   L VMIV+A RHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
         SKDQLQFK
Subjt:  HSKDQLQFK

XP_031740901.1 uncharacterized protein LOC101222950 isoform X2 [Cucumis sativus]2.5e-4282.57Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        ME S ANAVIQLR+S+ K GFS QD SDATMMRFLIARSME+ KA KMFVQW+KWRDA VPKG I+ESEVEDELKAKKIFLQG+SI QLPVMIV+ANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        HSKDQ+QFK
Subjt:  HSKDQLQFK

XP_038893024.1 sec14 cytosolic factor-like [Benincasa hispida]2.5e-4789.91Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDSG NA+IQLRNSVEK GFS Q+CSDATMMRFLIARSM++SKA KMFVQWRKWRDAMVPKGFI+ESEVEDELKAKKIFLQGLSI+QLPVMIVLANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        H+KDQLQFK
Subjt:  HSKDQLQFK

TrEMBL top hitse value%identityAlignment
A0A0A0KL83 CRAL-TRIO domain-containing protein1.2e-4282.57Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        ME S ANAVIQLR+S+ K GFS QD SDATMMRFLIARSME+ KA KMFVQW+KWRDA VPKG I+ESEVEDELKAKKIFLQG+SI QLPVMIV+ANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        HSKDQ+QFK
Subjt:  HSKDQLQFK

A0A1S3BT62 sec14 cytosolic factor-like1.7e-4485.32Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANAV  LRNS+EK GFS QD SDATMMRFLIARSME+SKA KMFVQW+KWRDA VPKG+I+ESEVEDELKAKKIFLQG+SI QLPVMIV+ANRHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
        HSKDQLQFK
Subjt:  HSKDQLQFK

A0A6J1FP08 sec14 cytosolic factor-like isoform X29.7e-3776.15Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANA+IQ+R +VEK G + Q+  DATMMRFLIARSME SK  KMFVQWRKWRDA+VPKGFISESEV++EL+AKKIFLQGLS   L VMIV+A RHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
         SKDQLQFK
Subjt:  HSKDQLQFK

A0A6J1FSN7 SEC14 cytosolic factor-like isoform X19.7e-3776.15Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANA+IQ+R +VEK G + Q+  DATMMRFLIARSME SK  KMFVQWRKWRDA+VPKGFISESEV++EL+AKKIFLQGLS   L VMIV+A RHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
         SKDQLQFK
Subjt:  HSKDQLQFK

A0A6J1K6Q5 SEC14 cytosolic factor-like6.3e-3675.23Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF
        MEDS ANA+IQ+R +VEK G + Q+  DATMMRFLIARSME SK  KMFVQWR WRDAMVPKGFI ESEV++EL+AKKIFLQGLS   L VMIV+A RHF
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHF

Query:  HSKDQLQFK
         SKDQLQFK
Subjt:  HSKDQLQFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein4.5e-1036.25Show/hide
Query:  QDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSK
        ++  D  + RFL AR ++I KA  MF+ +  W+ +M+PKG I E+E+ ++L   K+ +QG      P+ + + NRH  SK
Subjt:  QDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSK

AT1G14820.1 Sec14p-like phosphatidylinositol transfer family protein5.3e-1955.56Show/hide
Query:  TMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSKDQLQFK
        T+MRFL+ARSM+  KA KMFV W+KWR +MV P GFI ESEV+DEL+ +K+ LQG + +  P+++V+ ++HF SKD   FK
Subjt:  TMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSKDQLQFK

AT1G14820.2 Sec14p-like phosphatidylinositol transfer family protein5.3e-1955.56Show/hide
Query:  TMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSKDQLQFK
        T+MRFL+ARSM+  KA KMFV W+KWR +MV P GFI ESEV+DEL+ +K+ LQG + +  P+++V+ ++HF SKD   FK
Subjt:  TMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSKDQLQFK

AT1G14820.3 Sec14p-like phosphatidylinositol transfer family protein8.5e-2552.73Show/hide
Query:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRH
        ME+S   A+ QLR SVEKL  S +     T+MRFL+ARSM+  KA KMFV W+KWR +MV P GFI ESEV+DEL+ +K+ LQG + +  P+++V+ ++H
Subjt:  MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMV-PKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRH

Query:  FHSKDQLQFK
        F SKD   FK
Subjt:  FHSKDQLQFK

AT4G36640.1 Sec14p-like phosphatidylinositol transfer family protein2.2e-0440.35Show/hide
Query:  NAVIQLRNSVEKL-GFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPK
        N V +L++++  L G S   CSDA++ RFL AR+ ++ KA KM  +  KWR    P+
Subjt:  NAVIQLRNSVEKL-GFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCCGGCGCCAATGCGGTGATCCAGTTGAGAAATTCCGTCGAGAAATTAGGCTTCTCCGCACAAGATTGCTCCGATGCGACGATGATGAGGTTTCTGATTGC
GAGATCGATGGAGATTTCGAAAGCTGTGAAGATGTTCGTACAATGGCGGAAATGGAGAGACGCAATGGTTCCTAAGGGATTCATTAGTGAATCGGAGGTTGAAGATGAGT
TGAAAGCTAAGAAGATTTTCTTGCAGGGATTGTCAATTAACCAACTCCCTGTCATGATTGTTTTGGCCAATCGCCATTTTCATTCCAAGGATCAACTTCAATTTAAGAGT
TAG
mRNA sequenceShow/hide mRNA sequence
GCTTGCTCTCTCACCATCTAACTCTCTTACTCTCCAATGCTCGATCTTGTTTTGTATCACAAACTGAAAAGAGAGAGAAGAAGAAGTCGATCGAAGCTGCTTGCATGGAC
TCACCAAGGCTAATTAGAGAAGAAGAAGGAGAAAAAGAAAAGAAAAGAAAAAAAGAAGGAAAATCGACGAAGGAAGGGAGAAAAAAAAGTGAAAGTAATTTTGTAAAATT
GCTTGAGAATGATGTAATGAAGAGAGCAAACAAGCCCAGGTAACTACTCACCTTCCCTTTCCCCTTCTTCAAGTACTCTCTTTACTCCTCCTTTCACACACTCTGCATTT
TCCTCTCTCTCTCATATTCAATCCTTTAAAACTCCAAATCTTCTCTCTCCGCCGCCGATTCAACTTCCACCGACACCGACGATGGAGGATTCCGGCGCCAATGCGGTGAT
CCAGTTGAGAAATTCCGTCGAGAAATTAGGCTTCTCCGCACAAGATTGCTCCGATGCGACGATGATGAGGTTTCTGATTGCGAGATCGATGGAGATTTCGAAAGCTGTGA
AGATGTTCGTACAATGGCGGAAATGGAGAGACGCAATGGTTCCTAAGGGATTCATTAGTGAATCGGAGGTTGAAGATGAGTTGAAAGCTAAGAAGATTTTCTTGCAGGGA
TTGTCAATTAACCAACTCCCTGTCATGATTGTTTTGGCCAATCGCCATTTTCATTCCAAGGATCAACTTCAATTTAAGAGTTAG
Protein sequenceShow/hide protein sequence
MEDSGANAVIQLRNSVEKLGFSAQDCSDATMMRFLIARSMEISKAVKMFVQWRKWRDAMVPKGFISESEVEDELKAKKIFLQGLSINQLPVMIVLANRHFHSKDQLQFKS