CuGenDBv2

Gene ID	Lsi04G010960
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr04:13275272..13277154
RNA-Seq Expression	Lsi04G010960
Synteny	Lsi04G010960
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600851.1 hypothetical protein SDJN03_06084, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-62

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Query:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRR-ALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI
        MA HLQ  PILHS SL T+L PF  + NT   KI+ SF F  H SL+FR R RR  LN CAARRR+RYDD+E+EDE+YGHN+QIALLESYTQA AGEALI
Subjt:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRR-ALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI

Query:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNFSP
        VHAA+DGD VEVLVFKGFSSCLSY TS DPSRSV+P RA I+SIDRIKGPFDPSNIEY+Q+GITWESFNF P
Subjt:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNFSP

KAG7031485.1 hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.9e-62

74.42

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Query:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRR-ALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI
        MA HLQ  PILHS SL T+L PF  + NT   KI+ SF F  H SL+FR R RR  LN CAARRR+RYDD+E+EDE+YGHN+QIALLESYTQA AGEALI
Subjt:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRR-ALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI

Query:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNFSP
        VHAA+DGD VEVLVFKGFSSCLSY TS DPSRSV+P RA I+SIDRIKGPFDPSNIEY+++GITWESFNF P
Subjt:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNFSP

XP_008452414.1 PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo]

7.9e-67

77.84

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Query:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA
        MAT+L K PILHS+SLT L+PFPSNPNT L  I  SFP HKS +F+  +R     GCAARRR+RYDDDE+EDEDYGHNDQIALLESYTQA  GEALIVHA
Subjt:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA

Query:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
         VDG+ VEVLVFKGFSSCLSYGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y++KGITW SFNF
Subjt:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

XP_022985163.1 uncharacterized protein LOC111483247 [Cucurbita maxima]

6.9e-63

75.15

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Query:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIV
        MA HLQ  PILHS SL T+L PF  + NT   KIS SF F  H SL+FRPR R+  N CAARRR+RYDD+E+EDE+YGHN+QI+LLESYTQA AGEALIV
Subjt:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIV

Query:  HAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
        HAA+DGD VEVLVFKGFSSCLSY TS DPSRSV+P RA I+SIDRIKGPFDPSNIEY+QKG+TWESFNF
Subjt:  HAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

XP_038892698.1 uncharacterized protein LOC120081685 [Benincasa hispida]

2.2e-77

87.95

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Query:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHAA
        MATHLQK PILH  SLTILWPFPSNPNT L KISLSFP HKSL+FR  LRR  NGCAARRR+RYD+D++EDEDYGHNDQIALLESYTQATAGEALIVHA 
Subjt:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHAA

Query:  VDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
        VDGD VEVLVFKGFSSCLSYGTSPDPSRSV+P RAVIKSIDRIKGPFDPSNIEYL+KGITWESFNF
Subjt:  VDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJ82 Uncharacterized protein

7.2e-58

73.53

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Query:  MATHLQKFPILHSHSLTILWP-FPSNPNTPLNKISLSFP-FHKSLHFRPRL-RRALNGCAARRRIRY-DDDENEDEDYGHNDQIALLESYTQATAGEALI
        MAT+  K PILHS SLT L+P  PSNP   L     SFP  HKS +F+  L R   N CAARRR+RY DDDE+EDEDYGHN QIALLESYTQA  GEALI
Subjt:  MATHLQKFPILHSHSLTILWP-FPSNPNTPLNKISLSFP-FHKSLHFRPRL-RRALNGCAARRRIRY-DDDENEDEDYGHNDQIALLESYTQATAGEALI

Query:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
        VHA VDGD VEVLVFKGFSS LSYGTSPDPSRSV+P RA+IK IDRIKGPFDPSNI+Y+QKGITW SFNF
Subjt:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

A0A1S3BTQ8 uncharacterized protein LOC103493452

3.8e-67

77.84

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Query:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA
        MAT+L K PILHS+SLT L+PFPSNPNT L  I  SFP HKS +F+  +R     GCAARRR+RYDDDE+EDEDYGHNDQIALLESYTQA  GEALIVHA
Subjt:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA

Query:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
         VDG+ VEVLVFKGFSSCLSYGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y++KGITW SFNF
Subjt:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

A0A5A7UTE4 Uncharacterized protein

3.8e-67

77.84

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Query:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA
        MAT+L K PILHS+SLT L+PFPSNPNT L  I  SFP HKS +F+  +R     GCAARRR+RYDDDE+EDEDYGHNDQIALLESYTQA  GEALIVHA
Subjt:  MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHA

Query:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
         VDG+ VEVLVFKGFSSCLSYGTSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y++KGITW SFNF
Subjt:  AVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

A0A6J1FWQ3 uncharacterized protein LOC111447634

5.3e-61

74.12

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Query:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI
        MA HLQ  PILHS SL T+L PF  + NT   KI+ SF F  H SL+FR R R + LN CAARRR+RYDD+E+EDE+YGHN+QIALLESYTQA AGEALI
Subjt:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLR-RALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALI

Query:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
        VHAA+DGD VEVLVFKGFSSCLS+ TS DPSRSV+P RA I+SIDRIKGPFDPSNIEY+Q+GITWESFNF
Subjt:  VHAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

A0A6J1JCS8 uncharacterized protein LOC111483247

3.3e-63

75.15

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Query:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIV
        MA HLQ  PILHS SL T+L PF  + NT   KIS SF F  H SL+FRPR R+  N CAARRR+RYDD+E+EDE+YGHN+QI+LLESYTQA AGEALIV
Subjt:  MATHLQKFPILHSHSL-TILWPFPSNPNTPLNKISLSFPF--HKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIV

Query:  HAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF
        HAA+DGD VEVLVFKGFSSCLSY TS DPSRSV+P RA I+SIDRIKGPFDPSNIEY+QKG+TWESFNF
Subjt:  HAAVDGDRVEVLVFKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01755.1 unknown protein

7.4e-31

49.65

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Query:  TPLNKISLSFPFHKSLHFRPRL---RRALN--GCAARRRIRYD-DDENEDEDYGHNDQIALLESYTQATAGEALIVHAAVDGDRVEVLVFKGFSSCLSYG
        T +  ++ S+ + K L   P +   RRAL    C ARRR+R +   E+EDE YG+N+++A+LE Y+Q+   EALIV A VD + VEV++FKG SSCLS  
Subjt:  TPLNKISLSFPFHKSLHFRPRL---RRALN--GCAARRRIRYD-DDENEDEDYGHNDQIALLESYTQATAGEALIVHAAVDGDRVEVLVFKGFSSCLSYG

Query:  TSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESF
        T+ DP+RSV+P RAVI  IDR++GPFDPS I Y+Q+ I++++F
Subjt:  TSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESF

Sequences

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CDS sequence

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ATGGCAACCCACCTTCAAAAATTCCCAATCCTTCACTCTCATTCTCTCACTATTCTCTGGCCATTTCCCAGCAATCCAAACACACCTCTCAACAAAATCTCTCTCTCTTT
CCCATTCCACAAATCTCTCCATTTCAGACCTCGTCTCCGCCGCGCCCTCAACGGTTGCGCTGCTCGGCGGAGAATTCGCTACGACGATGATGAAAATGAAGATGAAGATT
ACGGCCACAACGACCAGATTGCGCTGTTAGAATCCTACACTCAGGCCACCGCTGGCGAGGCCCTCATCGTTCATGCGGCGGTTGATGGCGACCGTGTTGAAGTTCTTGTC
TTTAAGGGATTCTCATCATGCTTGAGCTATGGGACTTCACCAGATCCATCAAGAAGTGTTATTCCAGGTAGAGCAGTGATTAAATCTATAGATAGAATCAAAGGGCCATT
TGATCCATCAAATATTGAATATCTTCAGAAGGGTATCACTTGGGAATCATTTAACTTTTCCCCAAATACTTCAACTTCTAACAACTTCTAG

mRNA sequence

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ATAATAATAAATAAACCCAAAACAAACAAAACAAAAATTACAAAAGAACAAAACAAAAAACAAAAGGTTGGTGTGGAGAGCTCCACCTTATCTCCAATGGTCAAAATTTC
ACCACATTTCCTTCAACTTTCCTCCAAAAACACATTCAAAAAGAAAAATGGCAACCCACCTTCAAAAATTCCCAATCCTTCACTCTCATTCTCTCACTATTCTCTGGCCA
TTTCCCAGCAATCCAAACACACCTCTCAACAAAATCTCTCTCTCTTTCCCATTCCACAAATCTCTCCATTTCAGACCTCGTCTCCGCCGCGCCCTCAACGGTTGCGCTGC
TCGGCGGAGAATTCGCTACGACGATGATGAAAATGAAGATGAAGATTACGGCCACAACGACCAGATTGCGCTGTTAGAATCCTACACTCAGGCCACCGCTGGCGAGGCCC
TCATCGTTCATGCGGCGGTTGATGGCGACCGTGTTGAAGTTCTTGTCTTTAAGGGATTCTCATCATGCTTGAGCTATGGGACTTCACCAGATCCATCAAGAAGTGTTATT
CCAGGTAGAGCAGTGATTAAATCTATAGATAGAATCAAAGGGCCATTTGATCCATCAAATATTGAATATCTTCAGAAGGGTATCACTTGGGAATCATTTAACTTTTCCCC
AAATACTTCAACTTCTAACAACTTCTAGTCTCTATCTTTTTCATTCTCTTTTATTCAAATTTTGCCCTCTACATTTATATATTTGTGATTATATTCTTGTAAACAAAACA
TCCAAATAATTATAAGAATATTTATAGTATTTGACCTTCATATTTTGAATGTAGGGGTATAATTAGTCCAAATTAACCCTAGACCTATAGATTT

Protein sequence

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MATHLQKFPILHSHSLTILWPFPSNPNTPLNKISLSFPFHKSLHFRPRLRRALNGCAARRRIRYDDDENEDEDYGHNDQIALLESYTQATAGEALIVHAAVDGDRVEVLV
FKGFSSCLSYGTSPDPSRSVIPGRAVIKSIDRIKGPFDPSNIEYLQKGITWESFNFSPNTSTSNNF

Lsi04G010960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome