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Lsi04G011000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTwo-component response regulator
Genome locationchr04:13441528..13502309
RNA-Seq ExpressionLsi04G011000
SyntenyLsi04G011000
Gene Ontology termsNA
InterPro domainsIPR011006 - CheY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579124.1 Two-component response regulator ARR9, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1954.84Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        L+ S + VTV    N   EFLGLV DH D   E DS+I PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                         
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIKE
             LKPVQLS+VR+L PHLIKE
Subjt:  -----LKPVQLSNVRELGPHLIKE

KAG7016647.1 Two-component response regulator ARR9 [Cucurbita argyrosperma subsp. argyrosperma]7.4e-1954.4Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH--DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------
        L+ S + VTV    N   EFLGLV DH  D   E DS+I PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                        
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH--DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------

Query:  ------LKPVQLSNVRELGPHLIKE
              LKPVQLS+VR+L PHLIKE
Subjt:  ------LKPVQLSNVRELGPHLIKE

XP_022938947.1 two-component response regulator ORR4-like [Cucurbita moschata]7.4e-1954.33Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH----DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS----------------------
        L+ S + VTV    N   EFLGLV DH    D   E DSEI PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                      
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH----DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS----------------------

Query:  --------LKPVQLSNVRELGPHLIKE
                LKPVQLS+VR+L PHLIKE
Subjt:  --------LKPVQLSNVRELGPHLIKE

XP_022993798.1 two-component response regulator ORR4-like [Cucurbita maxima]2.2e-1854.84Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        L+ S + VTV    N   EFLGL  DH D   E DSEI PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                         
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIKE
             LKPVQLS+VR+L PHLIKE
Subjt:  -----LKPVQLSNVRELGPHLIKE

XP_023550008.1 two-component response regulator ORR4-like [Cucurbita pepo subsp. pepo]2.7e-2156.91Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS--------------------------
        L+ S + VTV    N   EFLGLV DHD   ETDSEI PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                          
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS--------------------------

Query:  ----LKPVQLSNVRELGPHLIKE
            LKPVQLS+VR+L PHLIKE
Subjt:  ----LKPVQLSNVRELGPHLIKE

TrEMBL top hitse value%identityAlignment
A0A0A0KQE6 Response regulatory domain-containing protein2.2e-1651.2Show/hide
Query:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVP--SNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------
        L+ S + VT  ++     EFLGLV+ HD   +TDS+I P  ++ HQEVDVNLIITDYSMP MSGYELLRKIKESKS                        
Subjt:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVP--SNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------

Query:  ------LKPVQLSNVRELGPHLIKE
              LKPVQLS+VR+L PHLIKE
Subjt:  ------LKPVQLSNVRELGPHLIKE

A0A1S3CPY2 two-component response regulator ORR10-like8.8e-1853.23Show/hide
Query:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVPSN-PHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        L+ S + VT  ++     EFLGLV+DHD   +TDS+I P N  HQEVDVNLIITDYSMP MSGYELLRKIKESKS                         
Subjt:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVPSN-PHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIKE
             LKPVQLS+VR+L PHLIKE
Subjt:  -----LKPVQLSNVRELGPHLIKE

A0A5D3BEM3 Two-component response regulator ORR10-like8.8e-1853.23Show/hide
Query:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVPSN-PHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        L+ S + VT  ++     EFLGLV+DHD   +TDS+I P N  HQEVDVNLIITDYSMP MSGYELLRKIKESKS                         
Subjt:  LQCSHFEVTVPNA---VSEFLGLVEDHDHHGETDSEIVPSN-PHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIKE
             LKPVQLS+VR+L PHLIKE
Subjt:  -----LKPVQLSNVRELGPHLIKE

A0A6J1FFG9 two-component response regulator ORR4-like3.6e-1954.33Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH----DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS----------------------
        L+ S + VTV    N   EFLGLV DH    D   E DSEI PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                      
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH----DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS----------------------

Query:  --------LKPVQLSNVRELGPHLIKE
                LKPVQLS+VR+L PHLIKE
Subjt:  --------LKPVQLSNVRELGPHLIKE

A0A6J1K3C0 two-component response regulator ORR4-like1.0e-1854.84Show/hide
Query:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        L+ S + VTV    N   EFLGL  DH D   E DSEI PSN HQEVDVNLIITDYSMP MSGY+LLRKIKESKS                         
Subjt:  LQCSHFEVTV---PNAVSEFLGLVEDH-DHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIKE
             LKPVQLS+VR+L PHLIKE
Subjt:  -----LKPVQLSNVRELGPHLIKE

SwissProt top hitse value%identityAlignment
B8BLZ4 Two-component response regulator ORR101.3e-1040.98Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------
        L+ S F+VT  ++ S   EFLGL   HDH    DS I   +  QEV VNLIITDY MP M+GY+LL+KIKES                            
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------

Query:  ---SLKPVQLSNVRELGPHLIK
            LKPV+LS++ +L PH++K
Subjt:  ---SLKPVQLSNVRELGPHLIK

O80365 Two-component response regulator ARR84.2e-0937.4Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGL-VEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        LQ S  +VT  ++ S   EFLGL V+D+D +  + S  +    HQEV++NLIITDY MP M+GY+LL+K+KES +                         
Subjt:  LQCSHFEVTVPNAVS---EFLGL-VEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIK
             LKPV+L+++ +L PH++K
Subjt:  -----LKPVQLSNVRELGPHLIK

Q2QXY3 Two-component response regulator ORR101.3e-1040.98Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------
        L+ S F+VT  ++ S   EFLGL   HDH    DS I   +  QEV VNLIITDY MP M+GY+LL+KIKES                            
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------

Query:  ---SLKPVQLSNVRELGPHLIK
            LKPV+LS++ +L PH++K
Subjt:  ---SLKPVQLSNVRELGPHLIK

Q2RAP3 Two-component response regulator ORR91.7e-1040.98Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------
        L+ S F+VT  ++ S   EFLGL   HDH    DS I   +  QEV VNLIITDY MP M+GY+LL+KIKES                            
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------

Query:  ---SLKPVQLSNVRELGPHLIK
            LKPV+LS++ +L PH++K
Subjt:  ---SLKPVQLSNVRELGPHLIK

Q4GZK2 Two-component response regulator ORR91.7e-1040.98Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------
        L+ S F+VT  ++ S   EFLGL   HDH    DS I   +  QEV VNLIITDY MP M+GY+LL+KIKES                            
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESK---------------------------

Query:  ---SLKPVQLSNVRELGPHLIK
            LKPV+LS++ +L PH++K
Subjt:  ---SLKPVQLSNVRELGPHLIK

Arabidopsis top hitse value%identityAlignment
AT1G10470.1 response regulator 47.7e-0635.85Show/hide
Query:  EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------------LKPVQLSNVRELGP
        EFLGL          D+E   S     + V+LIITDY MP M+GYELL+KIKES +                              LKPV+L++V+ L  
Subjt:  EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS------------------------------LKPVQLSNVRELGP

Query:  HLIKEI
        HL K++
Subjt:  HLIKEI

AT1G74890.1 response regulator 152.0e-0630.77Show/hide
Query:  LRDYCEELIRSNEESTVKIECSGVDD--INNPYIQATIHVSP-HLGSAQSGSSQLQCSHFEVTVPNAVSEFLGLVEDHDHHGETDSEIVPSNPHQEVDVN
        LRD    L   +  S+ ++    VDD  ++   I+  + +S   + + +SG+  LQ              +LGL  D+   G  D           + VN
Subjt:  LRDYCEELIRSNEESTVKIECSGVDD--INNPYIQATIHVSP-HLGSAQSGSSQLQCSHFEVTVPNAVSEFLGLVEDHDHHGETDSEIVPSNPHQEVDVN

Query:  LIITDYSMPIMSGYELLRKIKESKSLK--PVQLSNVRELGPHL
        LI+TDYSMP ++GYELL+KIKES +L+  PV + +   + P +
Subjt:  LIITDYSMPIMSGYELLRKIKESKSLK--PVQLSNVRELGPHL

AT2G41310.1 response regulator 33.0e-1037.4Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGL-VEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------
        LQ S  +VT  ++ S   EFLGL V+D+D +  + S  +    HQEV++NLIITDY MP M+GY+LL+K+KES +                         
Subjt:  LQCSHFEVTVPNAVS---EFLGL-VEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS-------------------------

Query:  -----LKPVQLSNVRELGPHLIK
             LKPV+L+++ +L PH++K
Subjt:  -----LKPVQLSNVRELGPHLIK

AT3G48100.1 response regulator 59.1e-0736.96Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKSLK--PVQLSNVRELGPHL
        L+ S  +VTV ++ +   ++LGL       GE +S +      +++ +NLI+TDYSMP M+GYELL+KIKES + +  PV + +   + P +
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKSLK--PVQLSNVRELGPHL

AT3G57040.1 response regulator 93.9e-1036.89Show/hide
Query:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS--------------------------
        LQ S  +VT  ++ S   EFLGL +  D +        P N HQ V+VNLIITDY MP M+GY+LL+K+KES +                          
Subjt:  LQCSHFEVTVPNAVS---EFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKS--------------------------

Query:  ----LKPVQLSNVRELGPHLIK
            LKPV+L+++ +L PH++K
Subjt:  ----LKPVQLSNVRELGPHLIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTTGTTTCCAAAGTGTGCCATCTCAAATAGATGAATTTACAGTGAGAAATTTAACATATTGGTCCTCGATATTTCCAAACTTTCCCAATTCATACAATTTAGG
TGTTAGAATAATAGTCAATATTTCAAAAAGTCAAGCAGCTAGAGTGAGAAAAAAGGCTAACAAAAAGTTGAATGGCTCATTAATTGAGCAATATAGGAGGTTGCGAGATT
ACTGTGAAGAACTTATTCGATCCAATGAGGAGAGTACTGTAAAGATTGAATGTAGTGGGGTCGATGACATCAACAACCCCTATATTCAGGCGACTATACATGTATCTCCT
CATCTTGGATCTGCACAATCTGGATCTTCTCAACTTCAATGTTCACATTTTGAAGTCACAGTCCCAAACGCGGTCTCAGAATTCCTTGGTTTGGTTGAGGATCATGATCA
TCATGGAGAAACAGACTCCGAAATCGTTCCCTCAAATCCTCATCAAGAAGTGGATGTAAATTTGATCATCACAGATTACAGTATGCCTATAATGAGTGGCTACGAACTTC
TTAGAAAGATCAAGGAATCGAAATCTCTGAAACCAGTTCAATTGTCTAATGTGAGGGAGTTGGGACCTCATTTGATTAAAGAAATAAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTTGTTTCCAAAGTGTGCCATCTCAAATAGATGAATTTACAGTGAGAAATTTAACATATTGGTCCTCGATATTTCCAAACTTTCCCAATTCATACAATTTAGG
TGTTAGAATAATAGTCAATATTTCAAAAAGTCAAGCAGCTAGAGTGAGAAAAAAGGCTAACAAAAAGTTGAATGGCTCATTAATTGAGCAATATAGGAGGTTGCGAGATT
ACTGTGAAGAACTTATTCGATCCAATGAGGAGAGTACTGTAAAGATTGAATGTAGTGGGGTCGATGACATCAACAACCCCTATATTCAGGCGACTATACATGTATCTCCT
CATCTTGGATCTGCACAATCTGGATCTTCTCAACTTCAATGTTCACATTTTGAAGTCACAGTCCCAAACGCGGTCTCAGAATTCCTTGGTTTGGTTGAGGATCATGATCA
TCATGGAGAAACAGACTCCGAAATCGTTCCCTCAAATCCTCATCAAGAAGTGGATGTAAATTTGATCATCACAGATTACAGTATGCCTATAATGAGTGGCTACGAACTTC
TTAGAAAGATCAAGGAATCGAAATCTCTGAAACCAGTTCAATTGTCTAATGTGAGGGAGTTGGGACCTCATTTGATTAAAGAAATAAATCCTTAA
Protein sequenceShow/hide protein sequence
MLLCFQSVPSQIDEFTVRNLTYWSSIFPNFPNSYNLGVRIIVNISKSQAARVRKKANKKLNGSLIEQYRRLRDYCEELIRSNEESTVKIECSGVDDINNPYIQATIHVSP
HLGSAQSGSSQLQCSHFEVTVPNAVSEFLGLVEDHDHHGETDSEIVPSNPHQEVDVNLIITDYSMPIMSGYELLRKIKESKSLKPVQLSNVRELGPHLIKEINP