CuGenDBv2

Gene ID	Lsi04G011110
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Endoplasmic reticulum transmembrane protein
Genome location	chr04:14178785..14179177
RNA-Seq Expression	Lsi04G011110
Synteny	Lsi04G011110
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008417 - B-cell receptor-associated protein 29/31

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040998.1 Integral to membrane, endoplasmic reticulum [Cucumis melo var. makuwa]

3.9e-63

98.46

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFC+FLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

XP_004142369.2 uncharacterized protein LOC101213354 [Cucumis sativus]

3.0e-63

99.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFC+FLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

XP_022153951.1 uncharacterized protein LOC111021338 [Momordica charantia]

3.3e-62

96.92

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIYWKYETRP+CESDSCTPSE+LRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

XP_022942023.1 uncharacterized protein LOC111447211 [Cucurbita moschata]

2.3e-63

99.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

XP_028952518.1 uncharacterized protein LOC114822347 [Malus domestica]

6.2e-61

93.85

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGLV VTRNLLKPFLSVVPFCLFLLMDIYWKYETRP+CE DSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        +FYWLLY+VTHLVV++EQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTU7 Endoplasmic reticulum transmembrane protein

1.4e-63

99.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFC+FLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

A0A5A7TDF8 Endoplasmic reticulum transmembrane protein

1.9e-63

98.46

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFC+FLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

A0A6J1DM88 Endoplasmic reticulum transmembrane protein

1.6e-62

96.92

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLT+PGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIYWKYETRP+CESDSCTPSE+LRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

A0A6J1FTP8 Endoplasmic reticulum transmembrane protein

1.1e-63

99.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

A0A6J1IKB0 Endoplasmic reticulum transmembrane protein

1.1e-63

99.23

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGL+AVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48440.1 B-cell receptor-associated 31-like

1.8e-21

41.73

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MAL+W++L Y  A E ++ L+LTLP    L+K +V +   +L+P  S+V F  F L+DIYWK E R +C S+ CT +E  R++KSI K+QRN +L AA +
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLK
        + YW +Y +      +E+L    +R K
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLK

AT3G03160.1 FUNCTIONS IN: molecular_function unknown

2.3e-61

87.69

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMV+LLT+PGLDGLRKGLVAVTRNLLKPFLS+VPFCLFLLMDIYWKYET P+C+ DSCTPSE+LRHQKS+MKSQRNALLIAAAL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYW+LYSVT+LVVK+E LNQR+ERL+N+D
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

AT3G17780.1 FUNCTIONS IN: molecular_function unknown

7.9e-22

41.41

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MAL+W++L Y  AAE  + ++LTLP    L+K +V++   +L P  S+V F  F L+DIYWK E R  C S+ CT +E  RH+KS+ K+QRN +L AA +
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKN
        + YW ++ +      +E+L Q  +R K+
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKN

AT5G17190.1 FUNCTIONS IN: molecular_function unknown

4.6e-62

88.46

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Query:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL
        MALEWVVLGYAAAAEAIMV+LLT+PGLD LRKGLVAVTRNLLKPFLS++PFCLFLLMDIYWKYETRP+C+ DSCTPSE+LRHQKSIMKSQRNALLIA+AL
Subjt:  MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAAL

Query:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD
        VFYW+LYSVT+LVV++EQLNQRVERLKN+D
Subjt:  VFYWLLYSVTHLVVKVEQLNQRVERLKNRD

Sequences

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CDS sequence

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ATGGCGTTGGAATGGGTCGTTCTTGGCTACGCTGCCGCCGCCGAGGCAATCATGGTTCTCCTCTTGACCCTCCCAGGCCTCGATGGCCTCCGCAAAGGTCTAGTCGCCGT
CACTCGCAACCTTCTCAAGCCATTCCTCTCCGTCGTCCCCTTTTGCCTCTTCTTGCTCATGGACATCTATTGGAAATATGAGACTCGACCCACTTGCGAATCGGACTCCT
GTACCCCTTCTGAGTACCTTCGCCACCAGAAATCGATCATGAAGAGCCAACGCAACGCGCTCTTGATCGCTGCAGCGCTTGTGTTTTACTGGCTGTTGTACTCTGTCACC
CATTTGGTTGTTAAGGTTGAGCAATTGAACCAGCGTGTCGAGAGGTTGAAGAATCGGGATTGA

mRNA sequence

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Protein sequence

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MALEWVVLGYAAAAEAIMVLLLTLPGLDGLRKGLVAVTRNLLKPFLSVVPFCLFLLMDIYWKYETRPTCESDSCTPSEYLRHQKSIMKSQRNALLIAAALVFYWLLYSVT
HLVVKVEQLNQRVERLKNRD

Lsi04G011110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome