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Lsi04G011300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMyb/SANT-like DNA-binding domain protein
Genome locationchr04:15165801..15166567
RNA-Seq ExpressionLsi04G011300
SyntenyLsi04G011300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600827.1 hypothetical protein SDJN03_06060, partial [Cucurbita argyrosperma subsp. sororia]5.6e-5379.47Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MAL+CFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNRSFSLR+FHRAV NLPTDAFIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQ LYSWGGE+  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

KAG7031463.1 hypothetical protein SDJN02_05503 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-5380.13Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MAL+CFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNRSFSLR+FHRAV NLPTDAFIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQVLYSWGGE+  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

XP_022941810.1 uncharacterized protein LOC111447065 [Cucurbita moschata]8.1e-5278.81Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MALLCFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNR FSLR+FHRAV NLPTD FIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQVLYSWGG +  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

XP_022993768.1 uncharacterized protein LOC111489674 [Cucurbita maxima]8.7e-5480.79Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MALLCFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNRSFSLR+FHRAV NLPTDAFIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQVLYSWGGE+  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

XP_038892979.1 uncharacterized protein LOC120081876 [Benincasa hispida]3.8e-5784.21Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVL-DDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYET
        MALLCFLLDLRT PPPIL GLTD    LANLYA+SSSSS+  ARIGLCY+LKN SSV  DDALLEVAYSP+RSFSLREFHRAVGNLPTDAFIP+INGYET
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVL-DDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYET

Query:  FSCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         SC     VKLSAVLSDQVLYSWGGED MRKVIVLSASA YDLDSNLERTLM
Subjt:  FSCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

TrEMBL top hitse value%identityAlignment
A0A0A0KML4 Uncharacterized protein1.0e-5279.22Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD--LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSC
        MALLCFLLDL T PPPILT LTD  LANLYAISSSSS+   RIGLCYVLKNAS V DDALLEVAYSP R FSL EFHRAV NLPTDAFIP+I+GYE+   
Subjt:  MALLCFLLDLRTFPPPILTGLTD--LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSC

Query:  HGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVSHLF
             VKLSAVLSDQVLYSWG ED  RKVIVLSAS+HYDLDSNLERTL V HLF
Subjt:  HGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVSHLF

A0A1S3BZE2 uncharacterized protein LOC103495109 isoform X29.7e-5180.82Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTDLANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSCHG
        MALLCFLLDLRTFPPPILT LTDLANLYAISSSSS+S  RIGLCYV KNAS V  D LLEVAYSP R FSL +FHRAV NLPTDAFIP+I+GYET  C  
Subjt:  MALLCFLLDLRTFPPPILTGLTDLANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSCHG

Query:  ISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTL
           VKLSAVLSDQVLYSW  ED  RKVIVLSAS+HYDLDSNLERTL
Subjt:  ISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTL

A0A5D3E3Y1 Uncharacterized protein9.7e-5180.82Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTDLANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSCHG
        MALLCFLLDLRTFPPPILT LTDLANLYAISSSSS+S  RIGLCYV KNAS V  D LLEVAYSP R FSL +FHRAV NLPTDAFIP+I+GYET  C  
Subjt:  MALLCFLLDLRTFPPPILTGLTDLANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSCHG

Query:  ISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTL
           VKLSAVLSDQVLYSW  ED  RKVIVLSAS+HYDLDSNLERTL
Subjt:  ISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTL

A0A6J1FUU7 uncharacterized protein LOC1114470653.9e-5278.81Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MALLCFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNR FSLR+FHRAV NLPTD FIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQVLYSWGG +  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

A0A6J1K393 uncharacterized protein LOC1114896744.2e-5480.79Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        MALLCFLLDLRT PPPIL+GLTD    LANLYAISSSSS+   RIGLCYVLKNASS  DDALLEVAY+PNRSFSLR+FHRAV NLPTDAFIPQIN YET 
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM
         C     VKLSAVLSDQVLYSWGGE+  RKVIVLSA AHYDLDS+LE+TLM
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G07380.1 unknown protein3.8e-3149.02Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        M LLCF++DLR   P ++  L      L+NL+AISS   S T RIGLCY+LK+  S  D   L+ AY+P  +F LR+FH A+ +LP DAF+P+I+     
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS
        SC  +   KLS+VL D+ LYSWGG D MRKVIVLS+    D+DS  + TLM +
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS

AT5G07380.2 unknown protein3.8e-3149.02Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        M LLCF++DLR   P ++  L      L+NL+AISS   S T RIGLCY+LK+  S  D   L+ AY+P  +F LR+FH A+ +LP DAF+P+I+     
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS
        SC  +   KLS+VL D+ LYSWGG D MRKVIVLS+    D+DS  + TLM +
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS

AT5G07380.3 unknown protein2.2e-3149.02Show/hide
Query:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF
        M LLCF++DLR   P ++  L      L+NL+AISS   S T RIGLCY+LK+  S  +D  L+ AY+P  +F LR+FH A+ +LP DAF+P+I+     
Subjt:  MALLCFLLDLRTFPPPILTGLTD----LANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETF

Query:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS
        SC  +   KLS+VL D+ LYSWGG D MRKVIVLS+    D+DS  + TLM +
Subjt:  SCHGISYVKLSAVLSDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCCTGTGTTTTCTGCTTGATCTCAGAACCTTCCCTCCTCCCATCCTCACCGGCTTAACGGATCTCGCCAATCTATATGCCATTTCATCATCATCATCGTCATC
CACTGCTAGAATCGGCTTGTGCTACGTCTTGAAGAATGCCTCCTCTGTTCTTGATGATGCTCTTTTGGAGGTTGCGTACAGTCCTAATAGAAGTTTTAGTCTCCGTGAAT
TCCATCGTGCTGTGGGGAATTTGCCAACCGATGCCTTTATTCCCCAAATCAATGGCTATGAAACCTTCTCTTGTCACGGTATCTCCTATGTGAAATTATCGGCTGTTTTA
AGTGATCAAGTTCTATACTCGTGGGGAGGTGAAGATGGAATGAGGAAAGTGATTGTACTAAGCGCATCTGCCCATTATGATTTGGATTCCAACTTGGAAAGGACACTTAT
GGTTAGTCATTTATTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCCTGTGTTTTCTGCTTGATCTCAGAACCTTCCCTCCTCCCATCCTCACCGGCTTAACGGATCTCGCCAATCTATATGCCATTTCATCATCATCATCGTCATC
CACTGCTAGAATCGGCTTGTGCTACGTCTTGAAGAATGCCTCCTCTGTTCTTGATGATGCTCTTTTGGAGGTTGCGTACAGTCCTAATAGAAGTTTTAGTCTCCGTGAAT
TCCATCGTGCTGTGGGGAATTTGCCAACCGATGCCTTTATTCCCCAAATCAATGGCTATGAAACCTTCTCTTGTCACGGTATCTCCTATGTGAAATTATCGGCTGTTTTA
AGTGATCAAGTTCTATACTCGTGGGGAGGTGAAGATGGAATGAGGAAAGTGATTGTACTAAGCGCATCTGCCCATTATGATTTGGATTCCAACTTGGAAAGGACACTTAT
GGTTAGTCATTTATTTATCTGA
Protein sequenceShow/hide protein sequence
MALLCFLLDLRTFPPPILTGLTDLANLYAISSSSSSSTARIGLCYVLKNASSVLDDALLEVAYSPNRSFSLREFHRAVGNLPTDAFIPQINGYETFSCHGISYVKLSAVL
SDQVLYSWGGEDGMRKVIVLSASAHYDLDSNLERTLMVSHLFI