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Lsi04G011330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionproline-rich family protein
Genome locationchr04:15258806..15259183
RNA-Seq ExpressionLsi04G011330
SyntenyLsi04G011330
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600825.1 hypothetical protein SDJN03_06058, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4175.81Show/hide
Query:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG
        M IQ +P YAL I S F +LSINV  THG +SSKKLD+S GGDDP VKCTPCT  P PPPPPPKKP PAYCPPPPPPPSSFIY+LGPPGNLYPID+DFAG
Subjt:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG

Query:  ADRRRMAVELPIVALFGLIVFIAL
        ADRRR+ VEL  VALFGLI F+ +
Subjt:  ADRRRMAVELPIVALFGLIVFIAL

KAG7031461.1 hypothetical protein SDJN02_05501, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4075Show/hide
Query:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG
        M IQ +P YAL I S   +LSINV  THG +SSKKLD+S GGDDP VKCTPCT  P PPPPPPKKP PAYCPPPPPPPSSFIY+LGPPGNLYPID+DFAG
Subjt:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG

Query:  ADRRRMAVELPIVALFGLIVFIAL
        ADRRR+ VEL  VALFGLI F+ +
Subjt:  ADRRRMAVELPIVALFGLIVFIAL

KGN50831.1 hypothetical protein Csa_004723 [Cucumis sativus]7.1e-3874.19Show/hide
Query:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG
        M IQP P Y+LLIL  FLILSIN+Q  HG ISSKKLD+     D SVKCTPCTRY  PPPPPPKKPPP YCPPPP PPSSFIYMLGPP NLYPI+ DFA 
Subjt:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG

Query:  ADRRRMAVELPIVALFGLIVFIAL
        ADRR +A+ELP+VA FGLI  IAL
Subjt:  ADRRRMAVELPIVALFGLIVFIAL

XP_022942055.1 probable glycosyltransferase 4 [Cucurbita moschata]2.0e-4076.8Show/hide
Query:  MFIQPQPCYALLILS-LFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA
        M IQ +P YAL ILS  F  LS NV  THG +SSKKLD+S GGDDPSVKCTPCT  P PPPPPPKKP PAYCPPPPPPPSSFIY+LGPPGNLYPID+DFA
Subjt:  MFIQPQPCYALLILS-LFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA

Query:  GADRRRMAVELPIVALFGLIVFIAL
        GADRRR+AVEL  VALFGLI F+ +
Subjt:  GADRRRMAVELPIVALFGLIVFIAL

XP_023546806.1 formin-like protein 20 [Cucurbita pepo subsp. pepo]9.0e-4176.8Show/hide
Query:  MFIQPQPCYALLILSLFL-ILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA
        M IQ +P YAL I S F+  LSINV  THG +SSKKLD+S GGDDPSVKCTPCT  P PPPPPPKKP PAYCPPPPPPPSSFIY+LGPPGNLYPID+DFA
Subjt:  MFIQPQPCYALLILSLFL-ILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA

Query:  GADRRRMAVELPIVALFGLIVFIAL
        GADRRR+AVEL  VALFGLI F+ +
Subjt:  GADRRRMAVELPIVALFGLIVFIAL

TrEMBL top hitse value%identityAlignment
A0A0A0KSV7 Uncharacterized protein3.4e-3874.19Show/hide
Query:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG
        M IQP P Y+LLIL  FLILSIN+Q  HG ISSKKLD+     D SVKCTPCTRY  PPPPPPKKPPP YCPPPP PPSSFIYMLGPP NLYPI+ DFA 
Subjt:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAG

Query:  ADRRRMAVELPIVALFGLIVFIAL
        ADRR +A+ELP+VA FGLI  IAL
Subjt:  ADRRRMAVELPIVALFGLIVFIAL

A0A438C166 Uncharacterized protein1.6e-1448.06Show/hide
Query:  ALLILSLFLILSINVQSTHGLISSKKLDKS--AGGDDPSVKC-------TPCTRYPLP-----PPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPID
        +L +L++FL+++      +G  +S+KLD+S  +G  D  VKC        PC + P P     PPPPPKKP   YCPPPPPPP+SF+Y+ GPPG LYPID
Subjt:  ALLILSLFLILSINVQSTHGLISSKKLDKS--AGGDDPSVKC-------TPCTRYPLP-----PPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPID

Query:  QDFAGADRRRMAVELPIVALFGLIVFIAL
        QD+ GA R  M V LPI+A  GL+  + L
Subjt:  QDFAGADRRRMAVELPIVALFGLIVFIAL

A0A6J1DRJ1 acrosin-like7.2e-3674.02Show/hide
Query:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRY--PLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDF
        M+IQ Q      IL+L LILSINV + HGLISS KLD S GGD  +VKCTPCTRY  P PPPPPPKKPP +YCPPPPPPPSSFIYMLGPPGNLYPI QDF
Subjt:  MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRY--PLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDF

Query:  AGADRRRMAVELPIVALFGLIVFIALW
        AG  RRR+AVELP+VAL GL+ FIA+W
Subjt:  AGADRRRMAVELPIVALFGLIVFIALW

A0A6J1FVH5 probable glycosyltransferase 49.7e-4176.8Show/hide
Query:  MFIQPQPCYALLILS-LFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA
        M IQ +P YAL ILS  F  LS NV  THG +SSKKLD+S GGDDPSVKCTPCT  P PPPPPPKKP PAYCPPPPPPPSSFIY+LGPPGNLYPID+DFA
Subjt:  MFIQPQPCYALLILS-LFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA

Query:  GADRRRMAVELPIVALFGLIVFIAL
        GADRRR+AVEL  VALFGLI F+ +
Subjt:  GADRRRMAVELPIVALFGLIVFIAL

A5B8N9 Uncharacterized protein1.6e-1448.06Show/hide
Query:  ALLILSLFLILSINVQSTHGLISSKKLDKS--AGGDDPSVKC-------TPCTRYPLP-----PPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPID
        +L +L++FL+++      +G  +S+KLD+S  +G  D  VKC        PC + P P     PPPPPKKP   YCPPPPPPP+SF+Y+ GPPG LYPID
Subjt:  ALLILSLFLILSINVQSTHGLISSKKLDKS--AGGDDPSVKC-------TPCTRYPLP-----PPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPID

Query:  QDFAGADRRRMAVELPIVALFGLIVFIAL
        QD+ GA R  M V LPI+A  GL+  + L
Subjt:  QDFAGADRRRMAVELPIVALFGLIVFIAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein5.5e-0442.17Show/hide
Query:  PSVKCTPCTRYPLPPPPPPKK---PPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAGADRRRMAVELPIVALFGLIVFIAL
        P   CTP    P P PPPPKK   PP    PPPPPPP ++++   PPG+LYPI +++ GA     +  +  + +FG++VF+ L
Subjt:  PSVKCTPCTRYPLPPPPPPKK---PPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAGADRRRMAVELPIVALFGLIVFIAL

AT1G23040.1 hydroxyproline-rich glycoprotein family protein3.2e-1241.03Show/hide
Query:  STHGLISSKKLDKSAGGDDPSVKCTP-CTRYPLPPPPPPKKPPPAYCPP----------------PPPPPSSFIYMLGPPGNLYPIDQDF-AGADRRRMA
        S+   + ++KLD+     DP +KC+P C + P PP PPP  PPP  CPP                PPPPP++F+Y+ GPPGNLYP+D+ F A A +  M 
Subjt:  STHGLISSKKLDKSAGGDDPSVKCTP-CTRYPLPPPPPPKKPPPAYCPP----------------PPPPPSSFIYMLGPPGNLYPIDQDF-AGADRRRMA

Query:  VELPIVALFGLIVFIAL
        V+L  +  FG++ F+ L
Subjt:  VELPIVALFGLIVFIAL

AT1G70990.1 proline-rich family protein1.3e-1048.39Show/hide
Query:  DDPSVKCTPCTR-YPLPPPPPPKKPPPAY-CPPP------------PPPPSSFIYMLGPPGNLYPIDQDFAGADRRRMAVELPIVALFGLIVF
        +DP +KCTPC +  P P PPPP  PPP+  CPPP            PPPPS++IYM GPPG LYPIDQ F  A    +     +V + GLI F
Subjt:  DDPSVKCTPCTR-YPLPPPPPPKKPPPAY-CPPP------------PPPPSSFIYMLGPPGNLYPIDQDFAGADRRRMAVELPIVALFGLIVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCCAACCCCAACCTTGTTATGCTCTCCTTATCCTCAGCTTGTTCTTGATTCTTTCAATCAATGTACAATCCACCCATGGCTTGATCTCCTCCAAGAAGCTTGA
CAAATCCGCCGGTGGGGACGATCCGAGCGTCAAGTGTACACCATGCACCCGTTATCCACTACCGCCACCACCTCCACCGAAGAAACCCCCACCGGCTTATTGCCCTCCGC
CACCTCCTCCTCCGTCGTCTTTCATATACATGCTCGGCCCGCCGGGAAACTTGTATCCCATCGACCAGGACTTCGCAGGGGCTGATCGGAGGAGGATGGCCGTGGAGTTG
CCGATTGTTGCTCTCTTTGGACTGATTGTGTTTATTGCTTTGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCCAACCCCAACCTTGTTATGCTCTCCTTATCCTCAGCTTGTTCTTGATTCTTTCAATCAATGTACAATCCACCCATGGCTTGATCTCCTCCAAGAAGCTTGA
CAAATCCGCCGGTGGGGACGATCCGAGCGTCAAGTGTACACCATGCACCCGTTATCCACTACCGCCACCACCTCCACCGAAGAAACCCCCACCGGCTTATTGCCCTCCGC
CACCTCCTCCTCCGTCGTCTTTCATATACATGCTCGGCCCGCCGGGAAACTTGTATCCCATCGACCAGGACTTCGCAGGGGCTGATCGGAGGAGGATGGCCGTGGAGTTG
CCGATTGTTGCTCTCTTTGGACTGATTGTGTTTATTGCTTTGTGGTGA
Protein sequenceShow/hide protein sequence
MFIQPQPCYALLILSLFLILSINVQSTHGLISSKKLDKSAGGDDPSVKCTPCTRYPLPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAGADRRRMAVEL
PIVALFGLIVFIALW