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Lsi04G011390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:15642377..15642715
RNA-Seq ExpressionLsi04G011390
SyntenyLsi04G011390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649707.1 hypothetical protein Csa_012825 [Cucumis sativus]4.4e-1553.1Show/hide
Query:  MSSPSTLMATSRTFLVSIHAPTTL-EATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDLSGMGASAPTPTSSILTCMPKGPVRWSAPNP
        MSSPS ++AT+R  L     PTTL E+TI + +ESI EVP+SS          +SISLPP+S+EF + D +GMGA AP P +S+L C PKGP+ WSAPNP
Subjt:  MSSPSTLMATSRTFLVSIHAPTTL-EATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDLSGMGASAPTPTSSILTCMPKGPVRWSAPNP

Query:  IHN--SILDSTIC
         HN   +  STIC
Subjt:  IHN--SILDSTIC

KAE8649709.1 hypothetical protein Csa_012565, partial [Cucumis sativus]5.8e-1555.34Show/hide
Query:  MSSPSTLMATSRTFLVSIHAPTTL-EATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDLSGMGASAPTPTSSILTCMPKGPVRWSAPNP
        MSSPS +MAT+R  L     PTTL E+TI + +ESI EVP+SS          +SISLPP+S+EF + D +GMGA AP P +S+L C PKGP+ WSAPNP
Subjt:  MSSPSTLMATSRTFLVSIHAPTTL-EATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDLSGMGASAPTPTSSILTCMPKGPVRWSAPNP

Query:  IHN
         HN
Subjt:  IHN

KAG6595583.1 hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0439.56Show/hide
Query:  LVSIHAPTTLEATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDL-SGMGASAPTPTSSILTCMPKGPVRWSAPNPIHNSI
        L+ I +P+T+ AT   S+  +    K S   PP       +  PP+SN+F T+ L +G  A  P P S++ +C PKGPVRWS+P+PI N++
Subjt:  LVSIHAPTTLEATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDL-SGMGASAPTPTSSILTCMPKGPVRWSAPNPIHNSI

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCATCCACACTCATGGCAACTTCTAGAACCTTTCTTGTTTCAATACATGCTCCAACAACTTTGGAAGCTACAATTCCTAGTTCTAAAGAATCTATTGTTGA
AGTACCTAAATCATCAATTTCCTTTCCTCCAAGCTCTTACGAGTTTACATCAATTTCTCTTCCTCCAAGCTCTAACGAGTTTACTACTGTTGATCTTAGTGGAATGGGTG
CAAGCGCACCAACCCCTACCTCATCCATCCTAACTTGCATGCCCAAAGGACCGGTCAGATGGTCTGCTCCAAATCCAATACACAACAGCATATTAGACTCGACTATTTGC
GCAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCATCCACACTCATGGCAACTTCTAGAACCTTTCTTGTTTCAATACATGCTCCAACAACTTTGGAAGCTACAATTCCTAGTTCTAAAGAATCTATTGTTGA
AGTACCTAAATCATCAATTTCCTTTCCTCCAAGCTCTTACGAGTTTACATCAATTTCTCTTCCTCCAAGCTCTAACGAGTTTACTACTGTTGATCTTAGTGGAATGGGTG
CAAGCGCACCAACCCCTACCTCATCCATCCTAACTTGCATGCCCAAAGGACCGGTCAGATGGTCTGCTCCAAATCCAATACACAACAGCATATTAGACTCGACTATTTGC
GCAAACTGA
Protein sequenceShow/hide protein sequence
MSSPSTLMATSRTFLVSIHAPTTLEATIPSSKESIVEVPKSSISFPPSSYEFTSISLPPSSNEFTTVDLSGMGASAPTPTSSILTCMPKGPVRWSAPNPIHNSILDSTIC
AN