; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G011680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPolyprotein
Genome locationchr04:16963293..16976208
RNA-Seq ExpressionLsi04G011680
SyntenyLsi04G011680
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041640.1 polyprotein [Cucumis melo var. makuwa]4.6e-2447.62Show/hide
Query:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR
        LKD+  ++L+EINK+L+ F I ++ E +  ++ K      N+    +P            ++ +YD + +++WNIDG  + QMMN+FQEM LA++AYS R
Subjt:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR

Query:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG
        KT L+ A I+ISG T NLRSWWHNQL+EQER  ILTATK + VKQEG
Subjt:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.1e-2141.52Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK+++ + LAEINK+L+   + +    +++   PKG                          +N  P   P          +++TYD  S+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT
        + QMMN FQEM LA+TAYST+K+   TA ILI G   NLRSWWHN L+EQ+RQ ILTAT+TV VK E + T
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.1e-2141.52Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK+++ + LAEINK+L+   + +    +++   PKG                          +N  P   P          +++TYD  S+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT
        + QMMN FQEM LA+TAYST+K+   TA ILI G   NLRSWWHN L+EQ+RQ ILTAT+TV VK E + T
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT

TYK19619.1 polyprotein [Cucumis melo var. makuwa]4.6e-2447.62Show/hide
Query:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR
        LKD+  ++L+EINK+L+ F I ++ E +  ++ K      N+    +P            ++ +YD + +++WNIDG  + QMMN+FQEM LA++AYS R
Subjt:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR

Query:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG
        KT L+ A I+ISG T NLRSWWHNQL+EQER  ILTATK + VKQEG
Subjt:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG

XP_022151716.1 uncharacterized protein LOC111019629 [Momordica charantia]2.7e-2444.38Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGESSKAN-VPKGF--------------------------RNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK++  +L A+IN++LS   + + +SS+ N V K                            +N  P   P          DQ+TYDESS+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGESSKAN-VPKGF--------------------------RNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGS
        + QMMN FQEM +A+TA+ST+K +L TA ILIS L+ NLRSWWHNQL++++R  IL ATK V VKQEGS
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGS

TrEMBL top hitse value%identityAlignment
A0A5A7TEB7 Polyprotein2.2e-2447.62Show/hide
Query:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR
        LKD+  ++L+EINK+L+ F I ++ E +  ++ K      N+    +P            ++ +YD + +++WNIDG  + QMMN+FQEM LA++AYS R
Subjt:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR

Query:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG
        KT L+ A I+ISG T NLRSWWHNQL+EQER  ILTATK + VKQEG
Subjt:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG

A0A5A7UF59 Enzymatic polyprotein1.0e-2141.52Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK+++ + LAEINK+L+   + +    +++   PKG                          +N  P   P          +++TYD  S+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT
        + QMMN FQEM LA+TAYST+K+   TA ILI G   NLRSWWHN L+EQ+RQ ILTAT+TV VK E + T
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT

A0A5D3BG41 Enzymatic polyprotein1.0e-2141.52Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK+++ + LAEINK+L+   + +    +++   PKG                          +N  P   P          +++TYD  S+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGE--SSKANVPKG-------------------------FRNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT
        + QMMN FQEM LA+TAYST+K+   TA ILI G   NLRSWWHN L+EQ+RQ ILTAT+TV VK E + T
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPT

A0A5D3D7T3 Polyprotein2.2e-2447.62Show/hide
Query:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR
        LKD+  ++L+EINK+L+ F I ++ E +  ++ K      N+    +P            ++ +YD + +++WNIDG  + QMMN+FQEM LA++AYS R
Subjt:  LKDNSKELLAEINKKLSVFKI-EEGESSKANVPKG---FRNEEPLFKP------------DQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTR

Query:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG
        KT L+ A I+ISG T NLRSWWHNQL+EQER  ILTATK + VKQEG
Subjt:  KTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEG

A0A6J1DFI7 uncharacterized protein LOC1110196291.3e-2444.38Show/hide
Query:  LKDNSKELLAEINKKLSVFKIEEGESSKAN-VPKGF--------------------------RNEEPLFKP----------DQKTYDESSVISWNIDGCL
        LK++  +L A+IN++LS   + + +SS+ N V K                            +N  P   P          DQ+TYDESS+I+WNIDG  
Subjt:  LKDNSKELLAEINKKLSVFKIEEGESSKAN-VPKGF--------------------------RNEEPLFKP----------DQKTYDESSVISWNIDGCL

Query:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGS
        + QMMN FQEM +A+TA+ST+K +L TA ILIS L+ NLRSWWHNQL++++R  IL ATK V VKQEGS
Subjt:  DQQMMNIFQEMFLASTAYSTRKTILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTTCTTGAGGTTGATAGCACGAGCATATCAACATCAAGACTAGAGGTGAGTGTTATTCCAGTTGTATTGAAGGATAATTCAAAAGAGCTCCTTGCTGAGATCAA
CAAGAAGCTTTCAGTTTTCAAAATAGAGGAAGGAGAATCCTCAAAAGCAAACGTCCCCAAAGGCTTCAGAAATGAAGAACCACTATTCAAACCAGATCAAAAGACTTATG
ACGAAAGTTCGGTCATAAGCTGGAATATTGACGGATGTTTAGACCAGCAGATGATGAATATCTTCCAAGAAATGTTTCTAGCCTCTACTGCCTACAGCACTAGAAAAACT
ATTCTTAGTACCGCACACATCTTGATTTCTGGTTTAACAAGAAATCTAAGAAGTTGGTGGCACAATCAGCTTTCTGAACAAGAAAGACAATCTATCCTGACTGCAACTAA
AACAGTTACAGTCAAGCAAGAAGGAAGTCCAACTACAGGCGTTGCCCCAATGGAAGTAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTTCTTGAGGTTGATAGCACGAGCATATCAACATCAAGACTAGAGGTGAGTGTTATTCCAGTTGTATTGAAGGATAATTCAAAAGAGCTCCTTGCTGAGATCAA
CAAGAAGCTTTCAGTTTTCAAAATAGAGGAAGGAGAATCCTCAAAAGCAAACGTCCCCAAAGGCTTCAGAAATGAAGAACCACTATTCAAACCAGATCAAAAGACTTATG
ACGAAAGTTCGGTCATAAGCTGGAATATTGACGGATGTTTAGACCAGCAGATGATGAATATCTTCCAAGAAATGTTTCTAGCCTCTACTGCCTACAGCACTAGAAAAACT
ATTCTTAGTACCGCACACATCTTGATTTCTGGTTTAACAAGAAATCTAAGAAGTTGGTGGCACAATCAGCTTTCTGAACAAGAAAGACAATCTATCCTGACTGCAACTAA
AACAGTTACAGTCAAGCAAGAAGGAAGTCCAACTACAGGCGTTGCCCCAATGGAAGTAACGTAA
Protein sequenceShow/hide protein sequence
MLFLEVDSTSISTSRLEVSVIPVVLKDNSKELLAEINKKLSVFKIEEGESSKANVPKGFRNEEPLFKPDQKTYDESSVISWNIDGCLDQQMMNIFQEMFLASTAYSTRKT
ILSTAHILISGLTRNLRSWWHNQLSEQERQSILTATKTVTVKQEGSPTTGVAPMEVT