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Lsi04G011690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 16
Genome locationchr04:16976423..16976752
RNA-Seq ExpressionLsi04G011690
SyntenyLsi04G011690
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsIPR033249 - CLAVATA3/ESR (CLE)-related protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR61476.1 hypothetical protein CICLE_v10017256mg [Citrus clementina]3.5e-0941.96Show/hide
Query:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK
        M++ V R      GR+R+ AGA AA FF W+IL+ S + L  A      G   T S+   RKT  F  E  F   PP+   +    E D+    +YEDDK
Subjt:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK

Query:  RVVHTGPNPLHN
        R++HTGPNPLHN
Subjt:  RVVHTGPNPLHN

KAA0063335.1 putative Clavata3/esr-related 16 [Cucumis melo var. makuwa]4.6e-4989.91Show/hide
Query:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV
        MRVGVERGRNGG GRKR+AGAVAAIFFIWLIL+VSRMRLSSAA+K VN RAL KSTVLHRKTHIFE EEVFKPPAGFKVHGGGENDDV DI+YEDDKRV+
Subjt:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

KAE8648231.1 hypothetical protein Csa_018474 [Cucumis sativus]1.2e-4189.9Show/hide
Query:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRV
        MRVGVERGRNGG GRK +AGAVAAIFFIWLILVVSRMRLSSAA K VNGR LTKSTVLHRKTHIFE EEVFKPPAGFKVHGGGENDDV DI+YEDDKR+
Subjt:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRV

KAG6600814.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3775.89Show/hide
Query:  MRVGVERGRNGGNGRKRQAG---AVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDK
        MRVGVERGRNGGNG KRQAG     AAIFFI LI V+SRM LSSAAV+GVN   LTKS  LHRKTH+FE EEVFKPPAGFK+H      DV DI+YEDDK
Subjt:  MRVGVERGRNGGNGRKRQAG---AVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDK

Query:  RVVHTGPNPLHN
        RVVHTGPNPLHN
Subjt:  RVVHTGPNPLHN

KDO64624.1 hypothetical protein CISIN_1g048706mg, partial [Citrus sinensis]6.0e-0944.33Show/hide
Query:  RKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN
        R+R AGA AA FF W+IL+ S + L  A      G   T S+   RKT  F  E  F   PP+   +    E D+    +YEDDKR++HTGPNPLHN
Subjt:  RKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A067FB56 Uncharacterized protein (Fragment)2.9e-0944.33Show/hide
Query:  RKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN
        R+R AGA AA FF W+IL+ S + L  A      G   T S+   RKT  F  E  F   PP+   +    E D+    +YEDDKR++HTGPNPLHN
Subjt:  RKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN

A0A0A0KIX6 Uncharacterized protein2.2e-4990.83Show/hide
Query:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV
        MRVGVERGRNGG GRK +AGAVAAIFFIWLILVVSRMRLSSAA K VNGR LTKSTVLHRKTHIFE EEVFKPPAGFKVHGGGENDDV DI+YEDDKRV+
Subjt:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

A0A2H5Q2V2 Uncharacterized protein1.1e-0841.07Show/hide
Query:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK
        M++ V R      GR+R+ AGA AA FF W+IL+ S + L  A      G   T S+   RKT     E  F   PP+   +    E D+    +YEDDK
Subjt:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK

Query:  RVVHTGPNPLHN
        R++HTGPNPLHN
Subjt:  RVVHTGPNPLHN

A0A5A7VBQ7 Putative Clavata3/esr-related 162.2e-4989.91Show/hide
Query:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV
        MRVGVERGRNGG GRKR+AGAVAAIFFIWLIL+VSRMRLSSAA+K VN RAL KSTVLHRKTHIFE EEVFKPPAGFKVHGGGENDDV DI+YEDDKRV+
Subjt:  MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVV

Query:  HTGPNPLHN
        HTGPNPLHN
Subjt:  HTGPNPLHN

V4UGP5 Uncharacterized protein1.7e-0941.96Show/hide
Query:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK
        M++ V R      GR+R+ AGA AA FF W+IL+ S + L  A      G   T S+   RKT  F  E  F   PP+   +    E D+    +YEDDK
Subjt:  MRVGVERGRNGGNGRKRQ-AGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVF--KPPAGFKVHGGGENDDVVDIIYEDDK

Query:  RVVHTGPNPLHN
        R++HTGPNPLHN
Subjt:  RVVHTGPNPLHN

SwissProt top hitse value%identityAlignment
Q8S8M2 CLAVATA3/ESR (CLE)-related protein 161.4e-0539.77Show/hide
Query:  AAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKT-HIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN
        AA+FF   I V ++  +SS+A+      A      L RK  H  EM     P A     G    ++  D +Y+DDKR+VHTGPNPLHN
Subjt:  AAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKT-HIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 171.6e-0490Show/hide
Query:  DIIYEDDKRVVHTGPNPLHN
        D IY DDKRVVHTGPNPLHN
Subjt:  DIIYEDDKRVVHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 171.6e-0490Show/hide
Query:  DIIYEDDKRVVHTGPNPLHN
        D IY DDKRVVHTGPNPLHN
Subjt:  DIIYEDDKRVVHTGPNPLHN

AT2G01505.1 CLAVATA3/ESR-RELATED 161.0e-0639.77Show/hide
Query:  AAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKT-HIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN
        AA+FF   I V ++  +SS+A+      A      L RK  H  EM     P A     G    ++  D +Y+DDKR+VHTGPNPLHN
Subjt:  AAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKT-HIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGGGTGTAGAAAGAGGAAGAAACGGCGGTAACGGAAGGAAACGGCAAGCCGGAGCGGTGGCGGCAATTTTCTTCATATGGCTTATTTTGGTGGTGTCTCGAAT
GAGATTATCGTCCGCCGCCGTTAAAGGGGTTAATGGCCGGGCGTTAACCAAATCCACCGTCCTTCACCGGAAGACTCACATTTTCGAGATGGAGGAGGTCTTCAAACCGC
CAGCCGGTTTCAAAGTCCACGGCGGAGGAGAAAACGACGACGTTGTGGACATAATATACGAAGATGATAAACGGGTGGTCCACACCGGCCCAAATCCGCTTCACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGGGTGTAGAAAGAGGAAGAAACGGCGGTAACGGAAGGAAACGGCAAGCCGGAGCGGTGGCGGCAATTTTCTTCATATGGCTTATTTTGGTGGTGTCTCGAAT
GAGATTATCGTCCGCCGCCGTTAAAGGGGTTAATGGCCGGGCGTTAACCAAATCCACCGTCCTTCACCGGAAGACTCACATTTTCGAGATGGAGGAGGTCTTCAAACCGC
CAGCCGGTTTCAAAGTCCACGGCGGAGGAGAAAACGACGACGTTGTGGACATAATATACGAAGATGATAAACGGGTGGTCCACACCGGCCCAAATCCGCTTCACAATTAG
Protein sequenceShow/hide protein sequence
MRVGVERGRNGGNGRKRQAGAVAAIFFIWLILVVSRMRLSSAAVKGVNGRALTKSTVLHRKTHIFEMEEVFKPPAGFKVHGGGENDDVVDIIYEDDKRVVHTGPNPLHN