CuGenDBv2

Gene ID	Lsi04G011720
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	FAD_binding_3 domain-containing protein
Genome location	chr04:17160447..17161218
RNA-Seq Expression	Lsi04G011720
Synteny	Lsi04G011720
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0071949 - FAD binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8648228.1 hypothetical protein Csa_018353 [Cucumis sativus]

4.9e-81

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGAII DN LL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      EIIST+DLVSGD +EFLLIIAPR  SYRLAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        AALKVAEEFKTSV+VCILWSA+TTKI+SSSK++LTPWENYI+VQEIRQS TSPSWWDVC+MTDKGAILVRPDEHIAWRVKSGISGDPNTE+I VFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

TYK29110.1 putative polyketide hydroxylase [Cucumis melo var. makuwa]

1.1e-80

76.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YS+GAIIPDNTLL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      +IIST+DLVSGD +EFLLIIAPR  SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A  KVAEEFKTSV+VCILWSA TTKI+SSSK+ LTPWENY+DV+EIRQS+TSPSWWD+C+MTDKGAILVRPDEHIAWRVKSGISGDPNTE++RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

XP_004142293.1 uncharacterized protein LOC101210766 [Cucumis sativus]

4.9e-81

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGAII DN LL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      EIIST+DLVSGD +EFLLIIAPR  SYRLAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        AALKVAEEFKTSV+VCILWSA+TTKI+SSSK++LTPWENYI+VQEIRQS TSPSWWDVC+MTDKGAILVRPDEHIAWRVKSGISGDPNTE+I VFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

XP_038892396.1 2,4-dichlorophenol 6-monooxygenase isoform X1 [Benincasa hispida]

2.6e-82

80.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGAIIPD++LL GREEPTGRRRQYVPSADPGSRLPHMNVRVLA+E                      EI ST+DLVSGDVV+FLLII PRP SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A LKVAEEFK SVRVCILWSADTTKI SSSKEELTPW+NYIDVQEIRQ STSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTE+ RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

XP_038892398.1 4-methyl-5-nitrocatechol 5-monooxygenase isoform X2 [Benincasa hispida]

2.6e-82

80.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGAIIPD++LL GREEPTGRRRQYVPSADPGSRLPHMNVRVLA+E                      EI ST+DLVSGDVV+FLLII PRP SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A LKVAEEFK SVRVCILWSADTTKI SSSKEELTPW+NYIDVQEIRQ STSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTE+ RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLD9 FAD_binding_3 domain-containing protein

2.4e-81

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGAII DN LL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      EIIST+DLVSGD +EFLLIIAPR  SYRLAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        AALKVAEEFKTSV+VCILWSA+TTKI+SSSK++LTPWENYI+VQEIRQS TSPSWWDVC+MTDKGAILVRPDEHIAWRVKSGISGDPNTE+I VFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

A0A1S3BZD5 putative polyketide hydroxylase

5.3e-81

76.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YS+GAIIPDNTLL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      +IIST+DLVSGD +EFLLIIAPR  SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A  KVAEEFKTSV+VCILWSA TTKI+SSSK+ LTPWENY+DV+EIRQS+TSPSWWD+C+MTDKGAILVRPDEHIAWRVKSGISGDPNTE++RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

A0A5A7UMT6 Putative polyketide hydroxylase

5.3e-81

76.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YS+GAIIPDNTLL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      +IIST+DLVSGD +EFLLIIAPR  SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A  KVAEEFKTSV+VCILWSA TTKI+SSSK+ LTPWENY+DV+EIRQS+TSPSWWD+C+MTDKGAILVRPDEHIAWRVKSGISGDPNTE++RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

A0A5D3E0S5 Putative polyketide hydroxylase

5.3e-81

76.5

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YS+GAIIPDNTLL GREEPTGRRRQY+PSADPGSRLPHMNVRVLA+E                      +IIST+DLVSGD +EFLLIIAPR  SY LAH
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK
        A  KVAEEFKTSV+VCILWSA TTKI+SSSK+ LTPWENY+DV+EIRQS+TSPSWWD+C+MTDKGAILVRPDEHIAWRVKSGISGDPNTE++RVFTTLLK
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

A0A6J1G1R0 uncharacterized protein LOC111449881

6.7e-76

74.13

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Query:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH
        YSEGA++PDN    GREEPTGRRR+Y+PSADPGS+LPHMNVR LA+                       E+IST+DLVSGD VEFLLIIAP P SYRLA 
Subjt:  YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAH

Query:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTS-PSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLL
        AAL VAEEFKTSVRVCILWSAD T+I+SSSKEELTPWENYIDVQEIRQ STS  SWWDVCQMTDKGAILVRPDEH+ WRVKSG+SGDPNTE+ RVFTTLL
Subjt:  AALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTS-PSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLL

Query:  K
        K
Subjt:  K

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G24340.1 FAD/NAD(P)-binding oxidoreductase family protein

5.6e-51

48.76

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Query:  YSEGAIIPDNTLLVGREE-PTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLA
        Y EGAI+PDN    G  E P+GRRR YVP A+PGSRLPHM V++L+   +                   + I+ST+DLVS + VEFLLII+P   SY LA
Subjt:  YSEGAIIPDNTLLVGREE-PTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLA

Query:  HAALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEI-RQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTL
        HA  KVA+EF  SV+VC++W +    ++  S   L PWENY+DV E+ +Q+    SWW +C+M+++G+ILVRPD+HIAWR KSGI+ DP   +  VFT +
Subjt:  HAALKVAEEFKTSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEI-RQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTL

Query:  L
        L
Subjt:  L

Sequences

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CDS sequence

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TACTCTGAAGGGGCAATTATTCCTGACAATACTCTACTCGTTGGTCGGGAAGAACCAACAGGTCGTCGAAGACAGTATGTCCCTTCTGCAGATCCAGGATCAAGGCTGCC
TCATATGAATGTGAGGGTTTTGGCCACTGAGGTACAGGATCCCCATTCCCCTCATACTCCCTTACTTCAACTAAAGACTGGGAATGGGTGTGTGCAGGAGATTATTTCCA
CGATTGATCTTGTATCTGGGGATGTAGTCGAATTCCTTCTCATAATAGCTCCGCGACCGGTGTCTTACCGTCTTGCTCACGCTGCTCTCAAGGTAGCCGAGGAATTCAAA
ACTTCGGTTAGGGTATGCATTTTATGGTCTGCTGATACCACCAAGATTGATTCAAGCAGCAAGGAAGAACTAACACCTTGGGAGAACTACATTGATGTTCAAGAAATTCG
ACAATCATCAACTTCACCATCATGGTGGGACGTCTGTCAGATGACTGACAAAGGAGCGATCCTAGTCCGGCCCGATGAGCATATTGCTTGGAGGGTGAAGTCTGGTATTT
CTGGGGATCCAAACACAGAAGTGATAAGAGTTTTTACTACTCTTTTGAAG

mRNA sequence

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Protein sequence

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YSEGAIIPDNTLLVGREEPTGRRRQYVPSADPGSRLPHMNVRVLATEVQDPHSPHTPLLQLKTGNGCVQEIISTIDLVSGDVVEFLLIIAPRPVSYRLAHAALKVAEEFK
TSVRVCILWSADTTKIDSSSKEELTPWENYIDVQEIRQSSTSPSWWDVCQMTDKGAILVRPDEHIAWRVKSGISGDPNTEVIRVFTTLLK

Lsi04G011720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome