; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G011770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationchr04:17341219..17348901
RNA-Seq ExpressionLsi04G011770
SyntenyLsi04G011770
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267774.1 unnamed protein product [Prunus armeniaca]2.0e-6655.2Show/hide
Query:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI
        +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I
Subjt:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATS
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI +YV++ S
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATS

Query:  DDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW
        D+ NL+FVV A  H KI+   TDD ISVS YPL +  CVG+ICE+LEHKW
Subjt:  DDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW

KAA0032138.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]8.9e-13190.91Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRIIGVSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQ

Query:  DYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN
        +YVS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+CVGMICEALEHKWIVEP  HN
Subjt:  DYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN

TYK14383.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]5.6e-7791.36Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+Y
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDY

Query:  VSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN
        VS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+CVGMICEALEHKWIVEP  HN
Subjt:  VSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN

XP_008456875.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]3.7e-11392.73Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNC
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRIIGVSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+C
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNC

Query:  VGMICEALEHKWIVEPPSHN
        VGMICEALEHKWIVEP  HN
Subjt:  VGMICEALEHKWIVEPPSHN

XP_038891816.1 ribosomal RNA small subunit methyltransferase nep-1-like [Benincasa hispida]1.1e-9694.36Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        M  QKRR S+SSSSKLARLKQE VENLDELKNVEDVNTN+SLLDV+NEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRDQ FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEK
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLP NSRIIGVSNGLEK
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEK

TrEMBL top hitse value%identityAlignment
A0A1S3C5G9 ribosomal RNA small subunit methyltransferase NEP1-like1.8e-11392.73Show/hide
Query:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
        +MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN
Subjt:  VMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYN

Query:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNC
        RFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRIIGVSNGLEKLVDIQ+YVS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+C
Subjt:  RFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNC

Query:  VGMICEALEHKWIVEPPSHN
        VGMICEALEHKWIVEP  HN
Subjt:  VGMICEALEHKWIVEPPSHN

A0A251RJG5 Uncharacterized protein6.3e-6653.54Show/hide
Query:  KRRKSQSSSSKLARLKQESVE-NLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQP
        +R++ + S S+L      +V+  L+E        T   +    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + 
Subjt:  KRRKSQSSSSKLARLKQESVE-NLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQP

Query:  LLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYV
        L  I DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI +YV
Subjt:  LLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYV

Query:  SATSDDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW
        ++ SD+ NL+FVV A  H KI+   TDD ISVS YPL +  C+G+ICE+LEHKW
Subjt:  SATSDDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW

A0A5A7SNC0 Ribosomal RNA small subunit methyltransferase NEP1-like4.3e-13190.91Show/hide
Query:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV
        MP QKRR S+S SSKLAR KQESVENLDELKNVEDV T +SLLD+MNEKPQE RVIFVLDNAPLHKGLVGKKWKILDSWRD  FLLKHKKNLKDF PENV
Subjt:  MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENV

Query:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQ
        RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSRIIGVSNGLEKLVDIQ
Subjt:  RQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQ

Query:  DYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN
        +YVS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+CVGMICEALEHKWIVEP  HN
Subjt:  DYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN

A0A5D3CR92 Ribosomal RNA small subunit methyltransferase NEP1-like2.7e-7791.36Show/hide
Query:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDY
        PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFR+LNEPLSQHLPSNSR   VSNGLEKLVDIQ+Y
Subjt:  PLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDY

Query:  VSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN
        VS T DDKN +FVVSATDHKKINIC DDMISVS YPLVSM+CVGMICEALEHKWIVEP  HN
Subjt:  VSATSDDKNLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN

A0A6J5TWQ3 Uncharacterized protein9.7e-6755.2Show/hide
Query:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI
        +SQ+ SS+   +K +  E  ++   +E    +A+L    N    + R IFV++NA L KG V K+WKILDS  D  FLLK KK+L DFRP  V + L  I
Subjt:  KSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDI

Query:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATS
         DS++NKAG VGAVYVK D GVLFEIKPH RIPRT  RFCG+IL+LL  +CIR +DTNE+L RV+ EP+++HLP NSR++G+S   EKLVDI +YV++ S
Subjt:  FDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATS

Query:  DDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW
        D+ NL+FVV A  H KI+   TDD ISVS YPL +  CVG+ICE+LEHKW
Subjt:  DDKNLIFVVSATDHKKIN-ICTDDMISVSQYPLVSMNCVGMICEALEHKW

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP14.9e-3136.76Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  R +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEAL
        L K  +RA D  + L +V+  P+S H P     IG S  +E + DI++ V ++     ++FVV A  H K+++  T+ M+S+S YPL +      +  A 
Subjt:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q06287 Ribosomal RNA small subunit methyltransferase NEP19.5e-2734.43Show/hide
Query:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L  HK    G  G K+ +L+    Q  L K  +++ + RP+   Q LL + DS +NKAGK+  VY++   G+L E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPL--HK----GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINIC---TDDMISVSQYPLVSMNC
        GL++ LL K  IR+ ++ E L +V+  P++ HLP+  R + +S     ++ +QDY+    DD+++   V A    K N      D+ + +S YPL +   
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINIC---TDDMISVSQYPLVSMNC

Query:  VGMICEALEHKW
            C   E  W
Subjt:  VGMICEALEHKW

Q92979 Ribosomal RNA small subunit methyltransferase NEP11.6e-2934.8Show/hide
Query:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL
        R+I VL+ A L    VGK +++L+  + +  LLK+ ++  + RP+   Q LL + DS +N+AG +  VY+     VL E+ P  RIPRT++RFCGL++ L
Subjt:  RVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDL

Query:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEAL
        L K  +RA D  + L +V+  P+S H P     +G S  +  + D+++ V ++     ++FVV A  H K+++  T+ M+S+S YPL +      +  A 
Subjt:  LKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEAL

Query:  EHKW
        E  W
Subjt:  EHKW

Q9P8P7 Ribosomal RNA small subunit methyltransferase NEP14.3e-2734.91Show/hide
Query:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC
        R+I VL  A L        G  G ++ +L+    Q  L K  +++ + RP+   Q LL + DS +NKAG++  VY++   GVL E+ P  RIPRT+ RF 
Subjt:  RVIFVLDNAPLHK------GLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFC

Query:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINIC---TDDMISVSQYPLVSMNC
        GL++ LL K  IR+E++ EVL +V+  P++ HLP+  R + +S   E L  +QDYV+   +++++   V A    K N      D+ I +S YPL +   
Subjt:  GLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINIC---TDDMISVSQYPLVSMNC

Query:  VGMICEALEHKW
            C   E  W
Subjt:  VGMICEALEHKW

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-15.0e-2832.57Show/hide
Query:  NASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR
        NA  +   N+   +  +  VL+   L    VG ++ IL S +  +FL K KK+  D+RP+ + Q LL++ DS +N+AGK+  V+ +    VL ++ P  R
Subjt:  NASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHAR

Query:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYP
        IPRT++RFCGL++ LL K  IRA +T + L  V+  P+S HLP  SR + +S  + +L      V+  +D+  ++ +      K +    D    +S YP
Subjt:  IPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDKNLIFVVSATDHKKINICTDDMISVSQYP

Query:  LVSMNCVGMICEALEHKW
        L +      +   LE  W
Subjt:  LVSMNCVGMICEALEHKW

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related3.2e-4640.23Show/hide
Query:  QKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLL--DVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLK
        ++++K++ SS K    K+ES    +E  + E+V   A+    D++   P        ++  ++FVL+ A L    VGK +++L+S    +FL K+ +N  
Subjt:  QKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLL--DVMNEKP--------QEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLK

Query:  DFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQ-HLPSNSRIIGVSNG
        D+RP+   Q LL I DS VNKAG++ AVYV+ + GVLFE+KPH RIPRT+ RF G++L LL+K  I A ++ E L R +  P+ + HLP NS  IG S+ 
Subjt:  DFRPENVRQPLLDIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQ-HLPSNSRIIGVSNG

Query:  LEKLVDIQDYVSAT-SDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEALEHKW
         EKLV++Q +++    DD++ +FVV A  H KI+    D+ +SVS+YPL +  C+  ICEAL   W
Subjt:  LEKLVDIQDYVSAT-SDDKNLIFVVSATDHKKINI-CTDDMISVSQYPLVSMNCVGMICEALEHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTGAAAAATGTAGAAGAT
GTTAATACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCACAAGGGTCTTGTTGGG
AAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTTCGTCAGCCTCTCCTT
GACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCACATGCTCGTATTCCA
AGAACATACAATCGCTTTTGTGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGTGTCCTCAACGAACCA
TTGTCTCAACATTTGCCCAGCAACTCTCGTATTATTGGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCTACTAGTGATGATAAG
AATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAAATTAATATATGTACGGATGACATGATATCGGTTTCACAGTATCCGCTGGTGTCCATGAATTGTGTA
GGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGA
mRNA sequenceShow/hide mRNA sequence
GTTAGCCCCCACCCTCCCTCAGCTCTCTCACGCACGCAAAATAAGAAAAAAACCCACAGTGCCGCTTCTCTCTCTCCTTTTCAGACCACCATCTCCGTCCTCTCC
GATCCGTCGATCATTGCCACCGTCACGCGCCGCCTCCCTTAGTTTTTCGCAAGACCATTCGCCGGTAGCACCCACTGCCGCCGCTCCTCCCGTGACCGTTGGACT
CCCATCGCTGCCCACGTGTCCAGCCGCCGCCGTTGCCGATTTTTTACAGTGAGCAAAACCCACATTGTGGGTTTAAGTGGTCTTGAGAATCTTGGTCATAAATTG
GTGCCAATTACCAATATGCCTGCTCAGAAAAGGAGGAAGTCCCAAAGTTCCTCTTCAAAGTTGGCAAGGCTGAAGCAGGAGAGCGTAGAGAATTTAGATGAATTG
AAAAATGTAGAAGATGTTAATACGAATGCCAGTTTGTTGGATGTGATGAATGAGAAGCCTCAAGAGCCTCGTGTAATTTTTGTTCTGGATAATGCTCCTTTGCAC
AAGGGTCTTGTTGGGAAGAAGTGGAAGATTCTTGATTCGTGGAGAGATCAACATTTCCTTCTTAAGCATAAGAAGAATCTTAAAGACTTTAGGCCTGAAAATGTT
CGTCAGCCTCTCCTTGACATTTTTGACAGCCGAGTTAATAAAGCTGGAAAAGTAGGCGCTGTTTATGTCAAAATTGATGATGGAGTACTATTTGAAATCAAGCCA
CATGCTCGTATTCCAAGAACATACAATCGCTTTTGTGGACTGATTTTGGACTTGCTAAAGAAGAGATGTATTCGTGCTGAAGATACAAACGAAGTACTTTTTCGT
GTCCTCAACGAACCATTGTCTCAACATTTGCCCAGCAACTCTCGTATTATTGGTGTCTCTAATGGTTTGGAAAAGCTGGTTGACATACAGGATTATGTTTCTGCT
ACTAGTGATGATAAGAATCTCATTTTTGTGGTCAGTGCGACAGATCATAAGAAAATTAATATATGTACGGATGACATGATATCGGTTTCACAGTATCCGCTGGTG
TCCATGAATTGTGTAGGCATGATTTGTGAAGCATTGGAGCATAAATGGATCGTTGAACCTCCTTCACATAACTGAATACACATTCACAATCTATCTTTTTTTCCC
CCTTTTATTTAATTTTACTTTTCTTATAGAGACGTTTTCACTTTTTTTATTTATTTATTAAAAAACTATCATACTATAGAAGATATTCAGGGAATTATAGAAGTA
ACATATTGCGATATAACATAGTGTATTGGTATATTAATTATAGTTTAGTTCATTAATTTTATAAACAAGGTGTTTAAGTATC
Protein sequenceShow/hide protein sequence
MPAQKRRKSQSSSSKLARLKQESVENLDELKNVEDVNTNASLLDVMNEKPQEPRVIFVLDNAPLHKGLVGKKWKILDSWRDQHFLLKHKKNLKDFRPENVRQPLL
DIFDSRVNKAGKVGAVYVKIDDGVLFEIKPHARIPRTYNRFCGLILDLLKKRCIRAEDTNEVLFRVLNEPLSQHLPSNSRIIGVSNGLEKLVDIQDYVSATSDDK
NLIFVVSATDHKKINICTDDMISVSQYPLVSMNCVGMICEALEHKWIVEPPSHN