; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G011810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1
Genome locationchr04:17404154..17420594
RNA-Seq ExpressionLsi04G011810
SyntenyLsi04G011810
Gene Ontology termsGO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005096 - GTPase activator activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027267 - AH/BAR domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454717.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1 [Cucumis melo]1.3e-5279.02Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRLH+GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPV+SKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLT+RLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

XP_008454718.1 PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X2 [Cucumis melo]1.3e-5279.02Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRLH+GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPV+SKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLT+RLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

XP_022150048.1 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X7 [Momordica charantia]1.6e-5075.52Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M AF+KLEDSPMFLKQIFSL +TTDELEDRC+RLH+GC+MFMATLGEA NGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLM FLNEDLQG +
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

XP_038892772.1 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1 [Benincasa hispida]7.5e-5380.42Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRL  GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

XP_038892773.1 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X2 [Benincasa hispida]7.5e-5380.42Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRL  GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

TrEMBL top hitse value%identityAlignment
A0A1S3C009 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X16.2e-5379.02Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRLH+GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPV+SKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLT+RLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

A0A1S3C0G9 ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X26.2e-5379.02Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        MGAFIKLEDSPMFLKQIFSL +TTDELEDRCRRLH+GCRMFM TLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPV+SKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLT+RLMQFLNEDLQGVK
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

A0A6J1D8E8 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X77.6e-5175.52Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M AF+KLEDSPMFLKQIFSL +TTDELEDRC+RLH+GC+MFMATLGEA NGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLM FLNEDLQG +
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

A0A6J1D8V5 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X37.6e-5175.52Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M AF+KLEDSPMFLKQIFSL +TTDELEDRC+RLH+GC+MFMATLGEA NGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLM FLNEDLQG +
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

A0A6J1D9M9 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X17.6e-5175.52Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M AF+KLEDSPMFLKQIFSL +TTDELEDRC+RLH+GC+MFMATLGEA NGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYK+QLRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVLTDRLM FLNEDLQG +
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

SwissProt top hitse value%identityAlignment
Q5W7F2 ADP-ribosylation factor GTPase-activating protein AGD35.1e-2846.43Show/hide
Query:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY
        F KL+DSPMF KQ+ S+ ++ + L +R  + + GCR +   LGEA +GDI+FA +LE FGGG +DP+SV+ GGPV++KF  A RE+ TYK+ LRSQ    
Subjt:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY

Query:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                           VEH+L DRL+QF N DL  VK
Subjt:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

Q9C6C3 ADP-ribosylation factor GTPase-activating protein AGD24.7e-3455.24Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M  FI LEDSPMF KQ+FSL  T+DEL+DRC++L+ G + FM  LGEAS G  +FADSLE FG G DDPVSVSIGGPVISKFI   REL++YK+ LRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVL +RL  F+  DLQ  K
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

Q9FIT8 ADP-ribosylation factor GTPase-activating protein AGD13.6e-2644.29Show/hide
Query:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY
        F KL+DSPMF +Q+ S+ ++ + L  RC R + GCR +   LGE  + DI F ++LE FGGG +DPV V+ GGPV++KF  A RE+ TYK+ LRSQ    
Subjt:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY

Query:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                           VEH+L+DRL+QF+N D+  VK
Subjt:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

Q9SMX5 ADP-ribosylation factor GTPase-activating protein AGD41.8e-3354.55Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M  FI LEDSPMF KQ+ SL  T DEL+DRC++L+ G + FM TLGEAS G+ +FA  LE FGGG DDP+S+SIGGPVISKFI A RELA+YK+ L SQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVL +RLM F++ DLQ  K
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

Arabidopsis top hitse value%identityAlignment
AT1G10870.1 ARF-GAP domain 41.3e-3454.55Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M  FI LEDSPMF KQ+ SL  T DEL+DRC++L+ G + FM TLGEAS G+ +FA  LE FGGG DDP+S+SIGGPVISKFI A RELA+YK+ L SQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVL +RLM F++ DLQ  K
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

AT1G60860.1 ARF-GAP domain 23.4e-3555.24Show/hide
Query:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH
        M  FI LEDSPMF KQ+FSL  T+DEL+DRC++L+ G + FM  LGEAS G  +FADSLE FG G DDPVSVSIGGPVISKFI   REL++YK+ LRSQ 
Subjt:  MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQH

Query:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                              VEHVL +RL  F+  DLQ  K
Subjt:  LGYESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

AT5G13300.1 ARF GTPase-activating protein3.6e-2946.43Show/hide
Query:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY
        F KL+DSPMF KQ+ S+ ++ + L +R  + + GCR +   LGEA +GDI+FA +LE FGGG +DP+SV+ GGPV++KF  A RE+ TYK+ LRSQ    
Subjt:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY

Query:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                           VEH+L DRL+QF N DL  VK
Subjt:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK

AT5G61980.1 ARF-GAP domain 12.6e-2744.29Show/hide
Query:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY
        F KL+DSPMF +Q+ S+ ++ + L  RC R + GCR +   LGE  + DI F ++LE FGGG +DPV V+ GGPV++KF  A RE+ TYK+ LRSQ    
Subjt:  FIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGY

Query:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK
                           VEH+L+DRL+QF+N D+  VK
Subjt:  ESLRLINFWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTTTATCAAACTCGAGGATTCTCCTATGTTCTTGAAACAGATATTTTCTCTAGCACAAACAACTGATGAGTTGGAAGATCGATGCAGAAGACTACACGATGG
ATGTAGGATGTTTATGGCAACTCTTGGAGAAGCTAGTAATGGAGACATTTCTTTTGCAGATTCTTTGGAAGGATTTGGTGGTGGTCAAGACGATCCTGTCAGCGTGTCCA
TTGGAGGTCCAGTTATATCCAAGTTTATCACTGCATTTCGTGAACTTGCTACCTACAAAGACCAACTGCGTTCTCAGCACTTGGGGTATGAGAGTTTAAGGTTGATTAAT
TTTTGGCTTGGGAAACAAGGGCAAAGAAATGCAACTGTAGAACATGTATTAACGGATCGGTTGATGCAGTTCTTGAATGAGGATTTACAAGGAGTAAAGCTGAAGCTTGG
AGTCTCAGGATCAGGGGGGAAGAGAAACAAATGTACAAGCCAATCAATAAATGATATGAAACAAAAAGCAGACTGGACCCAAAAACAAAGCAGCACAAAGATCCTTGATG
AAGAAGCAATAGTTGTGCTTATGAGAATTAACACCATGACTATTATTTGGAAGTCTTCTTCG
mRNA sequenceShow/hide mRNA sequence
ATTTGGTTGGGTGAGCTGGGGTTTTGTTTTGAAGCCATAATGACAAAGGAGCCCTCCACGTGCACAATAATGGAAGCCTCATTTCTTCCCAATCGCCATGGCTGAATCTC
AAACTCTCAGCTGAGAAACATAGACGCAAAAACATACGCAGGAATTTTTTGCGCCCTCACATACGCAACCGAACGACGGAATGGGGGCGTTTATCAAACTCGAGGATTCT
CCTATGTTCTTGAAACAGATATTTTCTCTAGCACAAACAACTGATGAGTTGGAAGATCGATGCAGAAGACTACACGATGGATGTAGGATGTTTATGGCAACTCTTGGAGA
AGCTAGTAATGGAGACATTTCTTTTGCAGATTCTTTGGAAGGATTTGGTGGTGGTCAAGACGATCCTGTCAGCGTGTCCATTGGAGGTCCAGTTATATCCAAGTTTATCA
CTGCATTTCGTGAACTTGCTACCTACAAAGACCAACTGCGTTCTCAGCACTTGGGGTATGAGAGTTTAAGGTTGATTAATTTTTGGCTTGGGAAACAAGGGCAAAGAAAT
GCAACTGTAGAACATGTATTAACGGATCGGTTGATGCAGTTCTTGAATGAGGATTTACAAGGAGTAAAGCTGAAGCTTGGAGTCTCAGGATCAGGGGGGAAGAGAAACAA
ATGTACAAGCCAATCAATAAATGATATGAAACAAAAAGCAGACTGGACCCAAAAACAAAGCAGCACAAAGATCCTTGATGAAGAAGCAATAGTTGTGCTTATGAGAATTA
ACACCATGACTATTATTTGGAAGTCTTCTTCG
Protein sequenceShow/hide protein sequence
MGAFIKLEDSPMFLKQIFSLAQTTDELEDRCRRLHDGCRMFMATLGEASNGDISFADSLEGFGGGQDDPVSVSIGGPVISKFITAFRELATYKDQLRSQHLGYESLRLIN
FWLGKQGQRNATVEHVLTDRLMQFLNEDLQGVKLKLGVSGSGGKRNKCTSQSINDMKQKADWTQKQSSTKILDEEAIVVLMRINTMTIIWKSSS