; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G011820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationchr04:17442419..17450502
RNA-Seq ExpressionLsi04G011820
SyntenyLsi04G011820
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4298223.1 unnamed protein product [Prunus armeniaca]6.5e-7860.7Show/hide
Query:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE
        M+R  L PCS R  K R      G+ E    D +   PGIPL  SN NM  RV FVLEKASL  AFVG+ Y ILN + HADFLRRK+MDPYKYRPDIVHE
Subjt:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY
        AL  IM +R+C AG +QAV+I+TDEG+LIKV+P   IPESL++FC MMSQLLQKLS K+ G+R +LL+VVKNP+ Q+LP N LKIGLS+SS+K V+ RDY
Subjt:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY

Query:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI
        +   S++VNLVFV+GAMAHG+ID +N D+++SVS Y LSA VCL  I  +L +K+ I
Subjt:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI

TYK19496.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]2.5e-13091.05Show/hide
Query:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA
        M   ILQPCSRKRKVRDD HS GEV+E S DVL AHPGIPLVTSNPNMK RV FVLEKASLTLAFVGKNYHILNQEKHA+FLRRKRMDPYKYRPDIVHEA
Subjt:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL
        LVHIMYSRICMAGLVQAVF+RTDEG+LIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKG RGKLLQVVKNPV QYLP+NC+KIGLSSSSKKV+EPRDYL
Subjt:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL

Query:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW
        KTFSND+NLVFVIGAMAHGKIDDEN+DEL+SVSGYHLSARVCLRMIYESLAKKY IW
Subjt:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW

XP_008448880.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]1.3e-10793.33Show/hide
Query:  MKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMM
        MK RV FVLEKASLTLAFVGKNYHILNQEKHA+FLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVF+RTDEG+LIKVDP TRIPESLDEFCDMM
Subjt:  MKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMM

Query:  SQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIY
        SQLLQKLSTKAKG RGKLLQVVKNPV QYLP+NC+KIGLSSSSKKV+EPRDYLKTFSNDVNLVFVIGAMAHGKIDDEN+DEL+SVSGYHLSARVCLRMIY
Subjt:  SQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIY

Query:  ESLAKKYGIW
        ESLAKKY IW
Subjt:  ESLAKKYGIW

XP_022150056.1 ribosomal RNA small subunit methyltransferase NEP1-like [Momordica charantia]1.1e-11481.71Show/hide
Query:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA
        M   ILQPCSRKRKVRD  H+I EVE    DVL   PGIP+V SN NMKSRVIFVL+KASLTLA VGK Y ILNQEKHADFLR+KRMDPY+YRPDI+HEA
Subjt:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL
        LVHIM+SRICMAG+V+AVFI+TD GILI+VDPRTRIPESLDEFCDMMSQLLQK STKAKGKRGKLLQ+VKNP+TQYLPINC+KIGL+SSS KVVEPRDY 
Subjt:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL

Query:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW
         TFSNDVN VFVIGAM H KID E +DE++SVSG+HLSARVCLRMIYESLAKKYGIW
Subjt:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW

XP_031745076.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis sativus]2.5e-8292.44Show/hide
Query:  MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDE-FCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIG
        MDPYKYRPDIVH ALVHIMYSRI MAGLVQAVFIRTDEGILIKVDPRTRIPESLDE FCDM+SQLLQKLSTKAKG  GKLLQVVKNPV QYLP+NCLKIG
Subjt:  MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDE-FCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIG

Query:  LSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW
        LSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKID+EN+DEL+SVSGYHLSARVCLRMIYESL  KYGIW
Subjt:  LSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW

TrEMBL top hitse value%identityAlignment
A0A1S3BLD0 ribosomal RNA small subunit methyltransferase NEP1-like6.5e-10893.33Show/hide
Query:  MKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMM
        MK RV FVLEKASLTLAFVGKNYHILNQEKHA+FLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVF+RTDEG+LIKVDP TRIPESLDEFCDMM
Subjt:  MKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMM

Query:  SQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIY
        SQLLQKLSTKAKG RGKLLQVVKNPV QYLP+NC+KIGLSSSSKKV+EPRDYLKTFSNDVNLVFVIGAMAHGKIDDEN+DEL+SVSGYHLSARVCLRMIY
Subjt:  SQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIY

Query:  ESLAKKYGIW
        ESLAKKY IW
Subjt:  ESLAKKYGIW

A0A315A5E9 Ribosomal RNA small subunit methyltransferase NEP1-like9.1e-7860.31Show/hide
Query:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE
        M+R  L PCS R  K R  G   GE E    D +   PGIPL  SN NM   V FVLEKASL   FVG+ Y ILN + HADFLRRK++DPYKYRPDIVHE
Subjt:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY
        AL  IM +R+C AG + AV+I+TDEG+LIKV+P+  IPESL++FC MMSQLLQKLS K+ G+RG+LL+VVKNP+ Q+LP N LKIGLS SS+K V+ RDY
Subjt:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY

Query:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI
        +   S++VNLVFV+GAMAHG+ID EN D+++SVS Y LS+ VCL  I  +L +K+ I
Subjt:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI

A0A5D3D7D3 Ribosomal RNA small subunit methyltransferase NEP1-like1.2e-13091.05Show/hide
Query:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA
        M   ILQPCSRKRKVRDD HS GEV+E S DVL AHPGIPLVTSNPNMK RV FVLEKASLTLAFVGKNYHILNQEKHA+FLRRKRMDPYKYRPDIVHEA
Subjt:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL
        LVHIMYSRICMAGLVQAVF+RTDEG+LIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKG RGKLLQVVKNPV QYLP+NC+KIGLSSSSKKV+EPRDYL
Subjt:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL

Query:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW
        KTFSND+NLVFVIGAMAHGKIDDEN+DEL+SVSGYHLSARVCLRMIYESLAKKY IW
Subjt:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW

A0A6J1DAB0 ribosomal RNA small subunit methyltransferase NEP1-like5.5e-11581.71Show/hide
Query:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA
        M   ILQPCSRKRKVRD  H+I EVE    DVL   PGIP+V SN NMKSRVIFVL+KASLTLA VGK Y ILNQEKHADFLR+KRMDPY+YRPDI+HEA
Subjt:  MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL
        LVHIM+SRICMAG+V+AVFI+TD GILI+VDPRTRIPESLDEFCDMMSQLLQK STKAKGKRGKLLQ+VKNP+TQYLPINC+KIGL+SSS KVVEPRDY 
Subjt:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL

Query:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW
         TFSNDVN VFVIGAM H KID E +DE++SVSG+HLSARVCLRMIYESLAKKYGIW
Subjt:  KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW

A0A6J5WCX0 Uncharacterized protein3.1e-7860.7Show/hide
Query:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE
        M+R  L PCS R  K R      G+ E    D +   PGIPL  SN NM  RV FVLEKASL  AFVG+ Y ILN + HADFLRRK+MDPYKYRPDIVHE
Subjt:  MERAILQPCS-RKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY
        AL  IM +R+C AG +QAV+I+TDEG+LIKV+P   IPESL++FC MMSQLLQKLS K+ G+R +LL+VVKNP+ Q+LP N LKIGLS+SS+K V+ RDY
Subjt:  ALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDY

Query:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI
        +   S++VNLVFV+GAMAHG+ID +N D+++SVS Y LSA VCL  I  +L +K+ I
Subjt:  LKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP12.8e-3942.72Show/hide
Query:  RVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQL
        R+I VLE ASL    VGK Y +LN ++H   L +   DP + RPDI H++L+ +M S +  AGL+Q V+I T + +LI+V+P+TRIP + D FC +M QL
Subjt:  RVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQL

Query:  LQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESL
        L KLS +A     KLL+V+KNPV+ + P+ C+KIG S S + + + R+ +   S+D  +VFV+GA AHGK+  E  +++VS+S Y LSA +    +  + 
Subjt:  LQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESL

Query:  AKKYGI
         + +G+
Subjt:  AKKYGI

Q06287 Ribosomal RNA small subunit methyltransferase NEP15.6e-3240Show/hide
Query:  PLVTSNPNMKSRVIFVLEKASLTLAFVGKN------YHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPR
        P++TS   +  R+I VL  ASL    +  N      Y +LN + H   L++   D  + RPDI H+ L+ ++ S I  AG +Q V+I+T  GILI+V+P 
Subjt:  PLVTSNPNMKSRVIFVLEKASLTLAFVGKN------YHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPR

Query:  TRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGK--IDDENVDELVS
         RIP +   F  +M QLL KLS ++     KLL+V+KNP+T +LP  C K+ LS  +  V+  +DY++   +D ++   +GAMA GK    DE VDE V 
Subjt:  TRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGK--IDDENVDELVS

Query:  VSGYHLSARV
        +S Y LSA V
Subjt:  VSGYHLSARV

Q92979 Ribosomal RNA small subunit methyltransferase NEP12.8e-3943.2Show/hide
Query:  RVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQL
        R+I VLE ASL    VGK Y +LN +KH   L +   DP + RPDI H++L+ +M S +  AGL+Q V+I T + +LI+V+P+TRIP + D FC +M QL
Subjt:  RVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQL

Query:  LQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESL
        L KLS +A     KLL+V+KNPV+ + P+ C+K+G S S   V + R+ +   S+D  +VFV+GA AHGK+  E  +++VS+S Y LSA +    +  + 
Subjt:  LQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESL

Query:  AKKYGI
         + +G+
Subjt:  AKKYGI

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP16.0e-3436.62Show/hide
Query:  KSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMS
        + R+I VLE A L    V   + +LN + HA  +R+ + DP   RPDI H+ L+ +  S +  AGL+Q VF+RT+  +LI+++P+TRIP +   F  +M 
Subjt:  KSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMS

Query:  QLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL-----KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCL
        QLL K   +A     +L+ V+KNP+T ++P+ C K  +S S K +   RD +      + S D  +V VIGA AHG +  +  +EL S+S Y LSA +  
Subjt:  QLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYL-----KTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCL

Query:  RMIYESLAKKYGI
          I  +  + +G+
Subjt:  RMIYESLAKKYGI

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-15.1e-3338.46Show/hide
Query:  TSNPNMKSRVIF-VLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLD
        T N     ++++ VLE  SL  A VG  Y IL+ +KHA+FLR+++ DP  YRPDI+H+ L++++ S +  AG ++ VF RT + +L+ V P+ RIP + D
Subjt:  TSNPNMKSRVIF-VLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLD

Query:  EFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLS------SSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGY
         FC +M QLL KLS +A     KL+ VVKNPV+ +LP+   K+ +S      + + K+V P         D  LV +IG +A GKI  +  D    +S Y
Subjt:  EFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLS------SSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGKIDDENVDELVSVSGY

Query:  HLSARVCLRMIYESLAKKYGI
         LSA +    +   L + +GI
Subjt:  HLSARVCLRMIYESLAKKYGI

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related4.5e-5344.96Show/hide
Query:  ERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNM-KSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA
        ++A  +  SR  +  D+     E    + D++    GIP+V + PN  KS ++FVLEKASL +A VGK Y +LN + HA+FL++   +P  YRPDI H+A
Subjt:  ERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNM-KSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQ-YLPINCLKIGLSSSSKKVVEPRDY
        L+ I+ S +  AG ++AV++RT++G+L +V P  RIP +   F  +M QLLQKLS  A   R KLL+ VKNP+ + +LP+N  +IG S SS+K+V  + +
Subjt:  LVHIMYSRICMAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQ-YLPINCLKIGLSSSSKKVVEPRDY

Query:  LKTF-SNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI
        L T   +D + VFV+GAMAHGKID   +DE VSVS Y LSA  C+  I E+LA  + I
Subjt:  LKTF-SNDVNLVFVIGAMAHGKIDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAGCGATCCTACAACCCTGTTCGAGGAAAAGGAAGGTGAGAGATGATGGACATAGTATTGGTGAGGTTGAAGAGGAATCTACAGATGTTTTGGAAGCACATCC
TGGTATTCCATTGGTTACTTCAAATCCAAACATGAAATCTAGAGTCATTTTTGTACTCGAGAAGGCATCTTTGACACTTGCCTTTGTTGGGAAGAACTATCATATTTTGA
ATCAAGAAAAACATGCTGACTTTTTGCGGAGGAAGAGAATGGATCCATACAAGTATAGACCTGATATAGTTCATGAGGCTCTTGTTCATATCATGTATTCTCGAATTTGT
ATGGCTGGACTAGTTCAAGCTGTGTTCATAAGAACTGATGAAGGGATTCTCATCAAAGTTGACCCACGTACTCGAATACCAGAATCATTGGACGAATTCTGTGATATGAT
GTCTCAATTGTTGCAAAAGCTTAGCACTAAAGCCAAAGGCAAACGTGGAAAACTATTGCAAGTGGTCAAAAATCCTGTGACCCAATACCTACCTATCAACTGCTTGAAGA
TCGGTCTTTCTTCAAGTTCCAAAAAGGTGGTTGAGCCACGAGATTACCTCAAAACGTTCAGCAACGACGTCAATCTAGTGTTTGTGATTGGCGCAATGGCTCATGGAAAA
ATCGATGATGAAAATGTAGATGAATTGGTATCAGTTTCTGGATATCATCTAAGCGCTAGAGTTTGTCTACGCATGATATACGAGAGCTTGGCTAAGAAATATGGAATCTG
GTAA
mRNA sequenceShow/hide mRNA sequence
CTATAAACTCCATAGAAATCAACATAATATCTCAAACTCACGTCCCATTTAGTTTTTAATTTTTTAAACACACGGCAGCCACCCCCAGCCCGTCACTCCCTTTGCCGCAG
CCTTCATCTGCAGTTCGCGCCGCCGAACGCCGCCCCTCACGCGTCGTTCACAGCACGTTACTCTCGCCGCCGTCCTCAGCCTCTCGCCGTCGCACGCGTTCTGCCGCCTG
TTCCCAAACAGTGGGTTCGGATTTGGATGAGTTCTCTTCAGACTTTTCTTGGTTGATTCGTGAATGCCCTCTTTTTGTTTGGCCTAAATTTGTTTCACAGAACTTTGTCG
TGCTTTCCAGCTAGGGTCAAGGACGTGTTGGGTAATTTTGACTTTAACGGTGACATATGGAAAGAGCGATCCTACAACCCTGTTCGAGGAAAAGGAAGGTGAGAGATGAT
GGACATAGTATTGGTGAGGTTGAAGAGGAATCTACAGATGTTTTGGAAGCACATCCTGGTATTCCATTGGTTACTTCAAATCCAAACATGAAATCTAGAGTCATTTTTGT
ACTCGAGAAGGCATCTTTGACACTTGCCTTTGTTGGGAAGAACTATCATATTTTGAATCAAGAAAAACATGCTGACTTTTTGCGGAGGAAGAGAATGGATCCATACAAGT
ATAGACCTGATATAGTTCATGAGGCTCTTGTTCATATCATGTATTCTCGAATTTGTATGGCTGGACTAGTTCAAGCTGTGTTCATAAGAACTGATGAAGGGATTCTCATC
AAAGTTGACCCACGTACTCGAATACCAGAATCATTGGACGAATTCTGTGATATGATGTCTCAATTGTTGCAAAAGCTTAGCACTAAAGCCAAAGGCAAACGTGGAAAACT
ATTGCAAGTGGTCAAAAATCCTGTGACCCAATACCTACCTATCAACTGCTTGAAGATCGGTCTTTCTTCAAGTTCCAAAAAGGTGGTTGAGCCACGAGATTACCTCAAAA
CGTTCAGCAACGACGTCAATCTAGTGTTTGTGATTGGCGCAATGGCTCATGGAAAAATCGATGATGAAAATGTAGATGAATTGGTATCAGTTTCTGGATATCATCTAAGC
GCTAGAGTTTGTCTACGCATGATATACGAGAGCTTGGCTAAGAAATATGGAATCTGGTAACTTATGTACAACCCACATCAAGTTTTGCAGCATCGTCAATATGCATTTTT
GATCAAGGATGGATGGCTTTAACTTGTTTTGAGTTATGCTCAATTTGGCTTTGCTGGCTTCTATATCTTAAGTTTAGGTTTGGCATTGGTTTTTTGTTGGAAGTTCTTTT
GTTGTAATCTAGGCTTCCTTTTAATGCTTCTATCTTTTTGGTTTGAGATTGGTTTCTAGTTGGGCTCCCTTACTTCAAAATTGCAGTCAGTCTTGTTTGACTAGTTAAAC
TATATATATAGTTTATTCTCTCATCCACACACGCTATATATGAGTTCAACAATATAGGTGGGTGGAGATTCGAATCTCTAACTTCTTGGTCGAAAATAAATGTTTAATGC
CTTATGTACCAGTTGTATTATTATTTTAACTTGACATGGGTAAAAAATATAGTTAAACTTCTTTTCATCCATTTTTATCAAAGGGTGAAATAGAAAATTTACGTTTGATT
CAATAAAAAAAACAAAATAAAAACACATCATAATCCATGAATTTGAAACGATACATAAATGTTTGCATTGAAATAAAAGACATAACAAGAAAAATAAACATTAAGTTGAG
CAAGCACTACATATTCATAC
Protein sequenceShow/hide protein sequence
MERAILQPCSRKRKVRDDGHSIGEVEEESTDVLEAHPGIPLVTSNPNMKSRVIFVLEKASLTLAFVGKNYHILNQEKHADFLRRKRMDPYKYRPDIVHEALVHIMYSRIC
MAGLVQAVFIRTDEGILIKVDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRGKLLQVVKNPVTQYLPINCLKIGLSSSSKKVVEPRDYLKTFSNDVNLVFVIGAMAHGK
IDDENVDELVSVSGYHLSARVCLRMIYESLAKKYGIW