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Lsi04G011940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransposase
Genome locationchr04:18006199..18006558
RNA-Seq ExpressionLsi04G011940
SyntenyLsi04G011940
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033120.1 uncharacterized protein E6C27_scaffold269G002580 [Cucumis melo var. makuwa]1.0e-1769.12Show/hide
Query:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        KR +Q++RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKK RVDK G+Y N+ VQEVVNR
Subjt:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

KAA0040930.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]1.6e-1872.06Show/hide
Query:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        KR +QQ+RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKKARVDK G+Y N+ VQEVVNR
Subjt:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

KAA0066037.1 hypothetical protein E6C27_scaffold21G00090 [Cucumis melo var. makuwa]2.7e-1864.86Show/hide
Query:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        C  +  KR +QQ+RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKK RVDK G+Y N+ +QEVVNR
Subjt:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

KAE8653128.1 hypothetical protein Csa_020048 [Cucumis sativus]7.9e-1865.75Show/hide
Query:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVN
        C  +  KR +QQ+RR KNKYNH+LSRKGYANLREE+K   S E D D+A+MWKKARVDK  EY N+HVQE++N
Subjt:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVN

XP_031744860.1 uncharacterized protein LOC105434490 [Cucumis sativus]7.9e-1865.75Show/hide
Query:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVN
        C  +  KR +QQ+RR KNKYNH+LSRKGYANLREE+K   S E D D+A+MWKKARVDK  EY N+HVQE++N
Subjt:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVN

TrEMBL top hitse value%identityAlignment
A0A5A7SQD4 Uncharacterized protein5.0e-1869.12Show/hide
Query:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        KR +Q++RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKK RVDK G+Y N+ VQEVVNR
Subjt:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

A0A5A7TC58 Putative serine/threonine-protein kinase nek27.7e-1972.06Show/hide
Query:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        KR +QQ+RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKKARVDK G+Y N+ VQEVVNR
Subjt:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

A0A5A7VG24 DUF4218 domain-containing protein1.3e-1864.86Show/hide
Query:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        C  +  KR +QQ+RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKK RVDK G+Y N+ +QEVVNR
Subjt:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

A0A5D3CYW8 Uncharacterized protein5.0e-1869.12Show/hide
Query:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        KR +Q++RR KNKYNHRLSRKGYANLREE+K + S E + D+A+MWKK RVDK G+Y N+ VQEVVNR
Subjt:  KRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

A0A5D3DS40 Transposase6.6e-1864.86Show/hide
Query:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR
        C  +  KR +QQ+RR  NKYNHRLSRK YANLREE+K + S E + D+A+MWKKARVDK G+Y N+ VQEVVNR
Subjt:  CYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTTATTTTTTTATTGATAGTTGTTACATTTATGTAGGAAAAAGAATCATTCAACAAGATCGTCGAGCTAAGAATAAGTATAACCATCGACTTTCAAGGAAAGG
CTACGCTAATCTTCGTGAGGAAATGAAAAAAGTATCTTCACATGAAGATGATTTTGACCAAGCTAACATGTGGAAGAAGGCTCGAGTAGATAAGAATGGAGAATACACCA
ATCAACATGTTCAAGAAGTTGTCAATCGTTGTAAGATATGCATTACATTTTACATAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTTATTTTTTTATTGATAGTTGTTACATTTATGTAGGAAAAAGAATCATTCAACAAGATCGTCGAGCTAAGAATAAGTATAACCATCGACTTTCAAGGAAAGG
CTACGCTAATCTTCGTGAGGAAATGAAAAAAGTATCTTCACATGAAGATGATTTTGACCAAGCTAACATGTGGAAGAAGGCTCGAGTAGATAAGAATGGAGAATACACCA
ATCAACATGTTCAAGAAGTTGTCAATCGTTGTAAGATATGCATTACATTTTACATAATGTAA
Protein sequenceShow/hide protein sequence
MLFYFFIDSCYIYVGKRIIQQDRRAKNKYNHRLSRKGYANLREEMKKVSSHEDDFDQANMWKKARVDKNGEYTNQHVQEVVNRCKICITFYIM