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Lsi04G011960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G011960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:18021915..18026958
RNA-Seq ExpressionLsi04G011960
SyntenyLsi04G011960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK42725.1 unknown [Lotus japonicus]1.5e-1355.42Show/hide
Query:  ITVSVDMKDARPASDVISPNACIRYPKLTQKPNSIPASRISTSSHLYNTSGTNGIAVVANRTTLKVAGSTNSSTSFTTGILLA
        ITV++D+ DARPAS+  SP+AC+RYP+LTQKPNS+PA  +  S H  N  G  G+A    RT +K AGS  + TS TTG+LLA
Subjt:  ITVSVDMKDARPASDVISPNACIRYPKLTQKPNSIPASRISTSSHLYNTSGTNGIAVVANRTTLKVAGSTNSSTSFTTGILLA
TrEMBL top hitse value%identityAlignment
I3SR33 Uncharacterized protein7.3e-1455.42Show/hide
Query:  ITVSVDMKDARPASDVISPNACIRYPKLTQKPNSIPASRISTSSHLYNTSGTNGIAVVANRTTLKVAGSTNSSTSFTTGILLA
        ITV++D+ DARPAS+  SP+AC+RYP+LTQKPNS+PA  +  S H  N  G  G+A    RT +K AGS  + TS TTG+LLA
Subjt:  ITVSVDMKDARPASDVISPNACIRYPKLTQKPNSIPASRISTSSHLYNTSGTNGIAVVANRTTLKVAGSTNSSTSFTTGILLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGCACGCAATATAGTAGAGGAATCAAGGAGTACGAGCAGGAACTACAGCCCCTAAAACTCCATCAAGTAAAGGAACTACAAAATATTACCGTGAGCGTTGATAT
GAAGGATGCTCGCCCAGCATCAGATGTTATAAGTCCAAATGCCTGCATCAGATACCCTAAACTAACCCAGAAACCTAACTCTATTCCAGCATCACGGATCTCAACATCAT
CCCATTTATACAACACAAGTGGAACAAATGGAATAGCAGTTGTGGCAAACCGCACAACATTGAAGGTAGCTGGATCCACTAATTCTTCAACCTCTTTCACCACTGGAATA
CTGCTAGCTACAGCAGCCAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGCACGCAATATAGTAGAGGAATCAAGGAGTACGAGCAGGAACTACAGCCCCTAAAACTCCATCAAGTAAAGGAACTACAAAATATTACCGTGAGCGTTGATAT
GAAGGATGCTCGCCCAGCATCAGATGTTATAAGTCCAAATGCCTGCATCAGATACCCTAAACTAACCCAGAAACCTAACTCTATTCCAGCATCACGGATCTCAACATCAT
CCCATTTATACAACACAAGTGGAACAAATGGAATAGCAGTTGTGGCAAACCGCACAACATTGAAGGTAGCTGGATCCACTAATTCTTCAACCTCTTTCACCACTGGAATA
CTGCTAGCTACAGCAGCCAAGATTTGA
Protein sequenceShow/hide protein sequence
MECTQYSRGIKEYEQELQPLKLHQVKELQNITVSVDMKDARPASDVISPNACIRYPKLTQKPNSIPASRISTSSHLYNTSGTNGIAVVANRTTLKVAGSTNSSTSFTTGI
LLATAAKI