CuGenDBv2

Gene ID	Lsi04G012210
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	septum-promoting GTP-binding protein 1
Genome location	chr04:18814712..18816016
RNA-Seq Expression	Lsi04G012210
Synteny	Lsi04G012210
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024907.1 spg1 [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-38

97.56

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFD+PWSVERNLT+GEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

XP_008454520.1 PREDICTED: septum-promoting GTP-binding protein 1 isoform X2 [Cucumis melo]

4.1e-38

98.78

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWT+VSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

XP_008454521.1 PREDICTED: septum-promoting GTP-binding protein 1 isoform X1 [Cucumis melo]

4.1e-38

98.78

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWT+VSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

XP_022937399.1 septum-promoting GTP-binding protein 1 [Cucurbita moschata]

5.4e-38

97.56

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFD+PWSVERNLT+GEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

XP_022976545.1 septum-promoting GTP-binding protein 1 [Cucurbita maxima]

5.4e-38

97.56

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFD+PWSVERNLT+GEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BZK2 septum-promoting GTP-binding protein 1 isoform X2

2.0e-38

98.78

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWT+VSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

A0A1S3C011 septum-promoting GTP-binding protein 1 isoform X1

2.0e-38

98.78

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWT+VSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

A0A5D3E2Y7 Septum-promoting GTP-binding protein 1 isoform X2

2.0e-38

98.78

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWT+VSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

A0A6J1CCV1 septum-promoting GTP-binding protein 1

2.6e-38

97.56

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFD+PWS+ERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

A0A6J1IJS8 septum-promoting GTP-binding protein 1

2.6e-38

97.56

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFD+PWSVERNLT+GEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

SwissProt top hits

e value

%identity

Alignment

P38987 Protein TEM1

9.0e-12

42.35

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Query:  GLNKITAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPII
        GLN  +AIPIL+GTK+D  + L P+ Q  I   +  YA+VM A L F S+  +IN+ KIFK   AK+F++  ++     IG+P++
Subjt:  GLNKITAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPII

P87027 Septum-promoting GTP-binding protein 1

8.4e-18

49.43

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Query:  GLNKITAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        G NK TA+PILIGTK+D F+  P + Q  I  QAR YA+ MKA+L F S+ H+INV KIFK + AK+FD+  ++     +G+PI+++
Subjt:  GLNKITAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

Arabidopsis top hits

e value

%identity

Alignment

AT3G21700.1 Ras-related small GTP-binding family protein

5.0e-34

75.61

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIP+++GTKFD+F++LP DLQWTI SQAR YA+ + ATLFFSS+ +NINVNKIFKF+ AKLFD+PW+VERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

AT3G21700.2 Ras-related small GTP-binding family protein

4.0e-07

71.43

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQ
        TAIP+++GTKFD+F++LP DLQWTI SQ
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQ

AT3G21700.3 Ras-related small GTP-binding family protein

5.0e-34

75.61

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIP+++GTKFD+F++LP DLQWTI SQAR YA+ + ATLFFSS+ +NINVNKIFKF+ AKLFD+PW+VERNLTIGEPIIDF
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

AT5G54840.1 Ras-related small GTP-binding family protein

9.2e-36

80.49

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Query:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF
        TAIPILIGTKFDDFVRLPP+LQWTIV+QARAYA+VM A+LFFSS+ HNINVNKIFKFI A+LF++PW ++RNLT+GEPIID+
Subjt:  TAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

Sequences

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CDS sequence

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mRNA sequence

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ATGTGGTGTTTGGTTCACGGACTCGGACTTAATAAAATTACAGCCATTCCCATTCTGATAGGAACCAAATTCGACGACTTTGTTAGACTCCCTCCAGATTTGCAGTGGAC
AATTGTTAGTCAGGCAAGAGCTTATGCAAGAGTTATGAAGGCTACTCTATTCTTCTCGAGCTCCATTCACAACATAAATGTCAACAAGATTTTCAAGTTCATTGCAGCCA
AGCTCTTCGACATCCCATGGTCCGTCGAGCGGAACCTCACCATCGGAGAGCCGATCATTGACTTCTAACTTTTGTTACACTCAACCTGATTCTGATGTACATACGATACG
AAAGAAAAACACGAAAGAAAGAAAGAAAGAATGAAAGAAAACGAAGAAAGTAGAAGGAGATTTTTTTTTCCCCTGCAGGTTGATTGATCATCTGTTTGGGATTTGTTATC
TGAAATCTTATTTGTAACTGTTTCTTTTGGCCCAAATGAACGGATTCTTAATTCAAGGAATAGAAAAAAAGATGGAAAGAAAGGAAAAAAAAATAGAGAATGGATCGAAT
TCCTTTTTACTCAAATGACAGAGTACATTTGATTGCGTTAAAGGGAGGGTATGAAAAGGCTGCACTAAGAGATTCTGGTGGGATTATTACTATCCATGGCTGATAGAAAA
CTGCCCCATGAAGTTTTCTTGTTCATAACTTTTGGGAGACACAATCCGAGGAAGCAAACTAATGTCCAACTCCAACTCCCATGTGATTTGATGTCTTGGAAGTTAACATA
TGGTTTTTTCTTCTTGAAGCTAACTCGAAACCTATATTGATATATCGTCGAATATCTAACTATAGTTTGTATGGTTTGTAATTATAAAATTGAAGTCAAGTCTTCTATGT
AGATCGTCCCTGGCGGGACGGGGATGAGAATGGCTTCTCGTCTTCCCATTCCATTTC

Protein sequence

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MWCLVHGLGLNKITAIPILIGTKFDDFVRLPPDLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSVERNLTIGEPIIDF

Lsi04G012210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome