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Lsi04G012300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr04:19113511..19124594
RNA-Seq ExpressionLsi04G012300
SyntenyLsi04G012300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035762.1 uncharacterized protein E6C27_scaffold403G00370 [Cucumis melo var. makuwa]2.0e-1668.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
KAA0040145.1 transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]2.6e-1669.23Show/hide
Query:  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
KAA0056379.1 hypothetical protein E6C27_scaffold186G001230 [Cucumis melo var. makuwa]2.0e-1668.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFR+K GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + CK VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
KAA0063743.1 uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa]2.0e-1668.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
TYK29140.1 uncharacterized protein E5676_scaffold120G002850 [Cucumis melo var. makuwa]2.0e-1668.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
TrEMBL top hitse value%identityAlignment
A0A5A7SWX9 DUF4218 domain-containing protein9.8e-1768.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class1.3e-1669.23Show/hide
Query:  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  KKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
A0A5A7US78 Uncharacterized protein9.8e-1768.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFR+K GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + CK VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
A0A5A7V6L2 Uncharacterized protein9.8e-1768.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
A0A5D3E0V3 Uncharacterized protein9.8e-1768.18Show/hide
Query:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
        +KKKG DVDE+E+FHE+HFREK GWINDKAKDAYLEMQ+ +  S + GVQTIS+ + C+ VL SRS
Subjt:  QKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTACAGATGGCATTGATTGAAGTTGAACATACGAACACTCCTGTATTGATTCTTCCACTAGGCAAGATGACCCTAGGGCATCAGAAAAAAAAAGGTAGCGACGT
TGACGAGGTGGAACTGTTCCACGAAAGTCATTTTCGTGAAAAGGGAGGATGGATCAATGATAAAGCAAAAGATGCATATCTCGAAATGCAAAAAAATCTTGACGCGTCAA
TTCAAGATGGTGTTCAGACAATCTCAAGTGTACAAGTGTGCAAGAAGGTATTGGATAGTCGATCAGCCCTGGGAATAGGAAAGTTGAAGACATACAATATGATGATATGC
AACATGGATAGACTGGATACTAACTGGCCTTGGTGCCAAGGCCGAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTACAGATGGCATTGATTGAAGTTGAACATACGAACACTCCTGTATTGATTCTTCCACTAGGCAAGATGACCCTAGGGCATCAGAAAAAAAAAGGTAGCGACGT
TGACGAGGTGGAACTGTTCCACGAAAGTCATTTTCGTGAAAAGGGAGGATGGATCAATGATAAAGCAAAAGATGCATATCTCGAAATGCAAAAAAATCTTGACGCGTCAA
TTCAAGATGGTGTTCAGACAATCTCAAGTGTACAAGTGTGCAAGAAGGTATTGGATAGTCGATCAGCCCTGGGAATAGGAAAGTTGAAGACATACAATATGATGATATGC
AACATGGATAGACTGGATACTAACTGGCCTTGGTGCCAAGGCCGAGTCTAA
Protein sequenceShow/hide protein sequence
MEVQMALIEVEHTNTPVLILPLGKMTLGHQKKKGSDVDEVELFHESHFREKGGWINDKAKDAYLEMQKNLDASIQDGVQTISSVQVCKKVLDSRSALGIGKLKTYNMMIC
NMDRLDTNWPWCQGRV