; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G012560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L8
Genome locationchr04:19557311..19559824
RNA-Seq ExpressionLsi04G012560
SyntenyLsi04G012560
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022666 - Ribosomal Proteins L2, RNA binding domain
IPR022669 - Ribosomal protein L2, C-terminal
IPR022671 - Ribosomal protein L2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015230.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-14698.46Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_004151970.1 60S ribosomal protein L8 [Cucumis sativus]1.1e-14698.85Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_008454581.1 PREDICTED: 60S ribosomal protein L8 [Cucumis melo]8.7e-14799.23Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_022139448.1 60S ribosomal protein L8-like [Momordica charantia]1.9e-14699.23Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK

XP_022940519.1 60S ribosomal protein L8 [Cucurbita moschata]2.5e-14698.46Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

TrEMBL top hitse value%identityAlignment
A0A0A0L7L1 Ribosomal_L2_C domain-containing protein5.5e-14798.85Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A1S3BYI5 60S ribosomal protein L84.2e-14799.23Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A6J1CFM0 60S ribosomal protein L8-like9.4e-14799.23Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADK

A0A6J1FKG6 60S ribosomal protein L81.2e-14698.46Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A6J1J2H3 60S ribosomal protein L81.2e-14698.46Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFRSHTHHRKG ARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRAIPEGAVVCNVEHH+GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

SwissProt top hitse value%identityAlignment
P25998 60S ribosomal protein L81.4e-13990.77Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGR+IRAQRKGAGSVF+SHTHHRKG ARFRSLDFGERNGYLKGV++E+IHDPGRGAPLARVTFR+PFRY HQKELF+AAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAVVCNVEH +GDRGVFARCSG YAIVISHNPDN T+RIKLPSG+KKIVPSGCR MIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA RRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P29766 60S ribosomal protein L83.5e-14392.69Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG ARFR+LDFGERNGYLKGV++E+IHDPGRGAPLARVTFRHPFRYKHQKELF+AAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAVVCNVEH +GDRGVFARCSGDYAIVISHNPDN T+R+KLPSGAKKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA ATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P46286 60S ribosomal protein L8-15.3e-13991.47Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARVTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAVVCNVEHH+GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q42064 60S ribosomal protein L8-34.8e-14091.47Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAV+CNVEHH+GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q4PSL7 60S ribosomal protein L8-24.4e-12582.63Show/hide
Query:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLARV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV
        NVLP+ +IPEGAV+CNVE H+GDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPLLKAGNAYHK++ KRNCWP V
Subjt:  NVLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV

Query:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        RGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Arabidopsis top hitse value%identityAlignment
AT2G18020.1 Ribosomal protein L2 family3.8e-14091.47Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARVTFRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAVVCNVEHH+GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT3G51190.1 Ribosomal protein L2 family3.1e-12682.63Show/hide
Query:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVF+SHTHHRKG A+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLARV FRHPFRY  QKELF+AAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV
        NVLP+ +IPEGAV+CNVE H+GDRG  AR SGDYAIVI+HNP+++T+R+KLPSG+KKI+PS CRAMIGQVAGGGRTEKPLLKAGNAYHK++ KRNCWP V
Subjt:  NVLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV

Query:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        RGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT4G36130.1 Ribosomal protein L2 family3.4e-14191.47Show/hide
Query:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKG A+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV FRHPFR+K QKELF+AAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+R+IPEGAV+CNVEHH+GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSG+KKIVPSGCRAMIGQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRAIPEGAVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

ATCG00830.1 ribosomal protein L24.9e-2332.16Show/hide
Query:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH
        HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  
Subjt:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH

Query:  LGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG
        LG  G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGGG
Subjt:  LGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG

ATCG01310.1 ribosomal protein L24.9e-2332.16Show/hide
Query:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH
        HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  
Subjt:  HRKGAAR--FRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEGAVVCNVEHH

Query:  LGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG
        LG  G  AR +G  A +I+   +  ++ +KLPSG  +++   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGGG
Subjt:  LGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGTGTGATCAGAGCACAGCGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACCGGAAGGGCGCTGCCCGTTTCCGCTCCCTCGACTTCGGTGAGCG
AAATGGTTACCTAAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACCTTCCGCCATCCGTTCCGTTACAAGCACCAGAAGG
AACTGTTCATCGCGGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGCAAAAAGGCTAATCTTGTTGTTGGTAATGTGCTCCCCATTAGAGCCATTCCTGAAGGT
GCTGTGGTTTGTAATGTTGAGCACCATCTTGGTGACCGAGGTGTGTTCGCTCGATGCTCTGGTGATTACGCTATTGTTATCAGCCACAACCCAGATAATGATACCAGCAG
GATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCCAGCGGATGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAAGAACAGAGAAGCCTCTTCTCAAGGCAGGTA
ATGCTTACCACAAGTTCCGCGTCAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTTGAACATCCCCATGGTGGTGGTAACCATCAACACATTGGT
CACGCTAGTACCGTCCGCCGTGATGCTCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCGAGGACAGGCTGCTGCTACTGCTGCCAAGGC
CGACAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
CTTAAACAAAGGTTAGGTAGGATGAAAAAAAAATTGTGAATATAATCACATAAGGAATAAGAATATATCCTTATAAAGGACAAACCCACAACTAATCCAAACAATATACA
TCATAAATGTGTATCCAAACACATGTCTAGGGCAACCCTCCTTTTCCTCTAAAAACCCTAATTTTCTATTTATCATTCACCGCCTCCCCTTCCCCTTCCCCCATATCCCA
GAAAACCCTAATTCCTATCCCCATCTTCCAATGGGTCGTGTGATCAGAGCACAGCGTAAGGGAGCTGGATCAGTCTTCCGCTCTCACACTCACCACCGGAAGGGCGCTGC
CCGTTTCCGCTCCCTCGACTTCGGTGAGCGAAATGGTTACCTAAAAGGTGTGGTCAGCGAAATCATTCACGATCCGGGCAGAGGTGCTCCGTTGGCCCGCGTTACCTTCC
GCCATCCGTTCCGTTACAAGCACCAGAAGGAACTGTTCATCGCGGCTGAGGGTATGTACACTGGTCAGTTCGTTTACTGTGGCAAAAAGGCTAATCTTGTTGTTGGTAAT
GTGCTCCCCATTAGAGCCATTCCTGAAGGTGCTGTGGTTTGTAATGTTGAGCACCATCTTGGTGACCGAGGTGTGTTCGCTCGATGCTCTGGTGATTACGCTATTGTTAT
CAGCCACAACCCAGATAATGATACCAGCAGGATTAAGCTACCATCTGGAGCCAAGAAGATTGTACCCAGCGGATGCCGTGCTATGATTGGTCAGGTTGCTGGAGGAGGAA
GAACAGAGAAGCCTCTTCTCAAGGCAGGTAATGCTTACCACAAGTTCCGCGTCAAGCGTAACTGCTGGCCCAAGGTTCGTGGTGTTGCTATGAATCCAGTTGAACATCCC
CATGGTGGTGGTAACCATCAACACATTGGTCACGCTAGTACCGTCCGCCGTGATGCTCCACCTGGTCAAAAGGTTGGTCTCATTGCTGCCAGAAGAACTGGTCGGCTCCG
AGGACAGGCTGCTGCTACTGCTGCCAAGGCCGACAAGGCTTAGAGCAATTCAACCTGTTCGACGCTTATTTTTCCTAATCCATAGCCCCCTTTTCATTATGTTTGATTGG
ATTTGCATTATGTTGAAGACCATATTTAGAAGTTTTTGTCCCGAGTTTTGTTACAAATGTCCTTTTCGAACATAATTCCTCTCTCCCTTGTTTCTTGTTGCTACGATGAA
TTTGATAGCATGAACATCAAGGTAATATCTCTCAAAAAGGATCTATATTTAGGATTTTGATGACAGGTTCTGGGAAAACAATTTCTAGCCAACTACTGAAAACAATTTAC
AAGGATATCTTAATTTCTTATATAGTTAATCTTTTATAAGATCTTTTCAACAGAAGTATGTTATTATGGATTGGTCACAAGACAATTCATCTAACCTAGCTATGGAAGGG
CTGGTTTATTTAATTGAAGCTTCTTAATAATATAATCGTGTTCGACCTTTTTCCTA
Protein sequenceShow/hide protein sequence
MGRVIRAQRKGAGSVFRSHTHHRKGAARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKHQKELFIAAEGMYTGQFVYCGKKANLVVGNVLPIRAIPEG
AVVCNVEHHLGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG
HASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA