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Lsi04G012610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr04:19721771..19722289
RNA-Seq ExpressionLsi04G012610
SyntenyLsi04G012610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151974.1 uncharacterized protein LOC101218420 [Cucumis sativus]6.7e-6385.16Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        M  LFG    R +ISILIILL+GLC +C      EDS SIHSLLRSMG PAGLVPKQ KSYT  ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ
        IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC PQ
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ

XP_022937405.1 uncharacterized protein LOC111443705 [Cucurbita moschata]1.7e-6683.54Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MA LFGSWN R RISI IIL VG C SC CSNS +DS SIHSLLRSMGLPAGLVPKQVKSYT  EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL
        IGV+GMSQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDC PQ   +L +PL
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL

XP_022976596.1 uncharacterized protein LOC111476944 [Cucurbita maxima]7.7e-6784.15Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MA LFGSWN R RISI IIL VG C SC CSNS +DS SIHSLLRSMGLPAGLVPKQVKSYT  EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL
        IGVEGMSQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDC PQ   +L +PL
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL

XP_023535139.1 uncharacterized protein LOC111796654 [Cucurbita pepo subsp. pepo]4.5e-6784.15Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MA LFGSWN R RISI IIL VG C SC CSNS +DS SIHSLLRSMGLPAGLVPKQVKSYT  EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL
        IGVEGMSQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDC PQ   +L +PL
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL

XP_038900271.1 uncharacterized protein LOC120087352 [Benincasa hispida]2.2e-6989.68Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MAALFGSWNLR  ISI+ ILL+GLC +C C   GEDS SIHSLLRSMGLPAGLVPKQ KSYT  ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ
        IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC PQ
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7K3 Uncharacterized protein3.3e-6385.16Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        M  LFG    R +ISILIILL+GLC +C      EDS SIHSLLRSMG PAGLVPKQ KSYT  ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ
        IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC PQ
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ

A0A1S3BZT2 uncharacterized protein LOC1034949769.5e-6383.87Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        M  LFG    R +ISILIILL+GLC +C      ++S SIHSLLRSMGLPAGLVPKQ KSYT  +NGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ
        IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC PQ
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQ

A0A6J1FGJ2 uncharacterized protein LOC1114437058.3e-6783.54Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MA LFGSWN R RISI IIL VG C SC CSNS +DS SIHSLLRSMGLPAGLVPKQVKSYT  EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL
        IGV+GMSQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDC PQ   +L +PL
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL

A0A6J1FNJ8 uncharacterized protein LOC1114458795.2e-6182.17Show/hide
Query:  ALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIG
        ALF S NL   IS  +IL +G  CSCFCSNS +DS SIH LLRSMGLPAGLVPKQVKSYT  ENGRLEV+LD PCMAKYENRVIF++VFSANLSYGSLIG
Subjt:  ALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIG

Query:  VEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCK-PQGEF
        V+GMSQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC  PQ  F
Subjt:  VEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCK-PQGEF

A0A6J1IHB3 uncharacterized protein LOC1114769443.7e-6784.15Show/hide
Query:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL
        MA LFGSWN R RISI IIL VG C SC CSNS +DS SIHSLLRSMGLPAGLVPKQVKSYT  EN RLEVYLD PCMAKYENRVIF++VFSANLSYGSL
Subjt:  MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT-HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSL

Query:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL
        IGVEGMSQEELFLWLPVKDIIVN P+SGVILIDIGVAHKQLSLSLFEDPPDC PQ   +L +PL
Subjt:  IGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5387.2e-3957.04Show/hide
Query:  ILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLW
        +L++LLV      F + S +   SI +LL + GLP GL P  V+SY+   + G LEV L  PC A++ENRV FD V  ANLSYG L+G+EG++QEELFLW
Subjt:  ILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFLW

Query:  LPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQG
        LPVK I VN P+SG++L DIGVAHKQ+S SLFEDPP C P G
Subjt:  LPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQG

AT3G07460.1 Protein of unknown function, DUF5382.4e-2643.97Show/hide
Query:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL
        RI  + +L   L      S    ++ SI  +L + GLP GL PK VK +T   E GR  VYL+  C AKYE  + +D + S  + Y  +  + G+S +EL
Subjt:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL

Query:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC
        FLWL VK I V+ P+SG+I  D+GV  KQ SLSLFE P DC
Subjt:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC

AT3G07460.2 Protein of unknown function, DUF5382.4e-2643.97Show/hide
Query:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL
        RI  + +L   L      S    ++ SI  +L + GLP GL PK VK +T   E GR  VYL+  C AKYE  + +D + S  + Y  +  + G+S +EL
Subjt:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYT--HENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL

Query:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC
        FLWL VK I V+ P+SG+I  D+GV  KQ SLSLFE P DC
Subjt:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDC

AT3G07470.1 Protein of unknown function, DUF5385.4e-2640.56Show/hide
Query:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYTH--ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL
        RI  +  L + L      S +  ++ +I+ +L + GLP+G+ PK V+ +T   E GR  VYL+  C AKYE  + +D   +  +    +  + G+S +EL
Subjt:  RISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYTH--ENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL

Query:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKP
        FLW PVK I V+ P+SG+I  D+GV  KQ SLSLFE P DC P
Subjt:  FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKP

AT5G54530.1 Protein of unknown function, DUF5385.7e-4462.94Show/hide
Query:  ISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSY-THENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFL
        IS +I+LL  L  S   S S    P++H +LRS GLPAGL+P++V SY  H +GRLEV+L APC AK+E  V F+ V   NLSYGSL+GVEG+SQ+ELFL
Subjt:  ISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSY-THENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEELFL

Query:  WLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQG
        WL VKDI+V  P SGVI+ DIGVA KQLSLSLFEDPP CKP G
Subjt:  WLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCCTGTTTGGGAGCTGGAATTTGAGGACTCGGATCTCAATACTCATCATCTTGTTGGTGGGTTTGTGTTGTTCTTGTTTCTGCAGCAATTCTGGCGAAGATTC
TCCTTCGATTCATTCGCTTTTGCGGTCGATGGGTCTTCCAGCAGGGCTGGTGCCGAAGCAAGTGAAATCTTACACACATGAAAATGGTCGGTTGGAAGTGTATTTGGATG
CTCCATGTATGGCGAAATATGAGAACAGAGTGATTTTCGACACTGTTTTTAGTGCTAATCTTAGCTATGGCAGCTTGATTGGAGTGGAGGGTATGTCTCAAGAGGAGCTT
TTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTACCCTACTTCTGGTGTCATTCTTATTGACATTGGTGTTGCTCATAAACAACTCTCTTTGTCTCTCTTTGAAGA
TCCTCCTGATTGTAAACCTCAAGGTGAATTTTCACTTATTTCTCCTCTCTCTCTCTTGATTTTCATGGGGTTTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCCTGTTTGGGAGCTGGAATTTGAGGACTCGGATCTCAATACTCATCATCTTGTTGGTGGGTTTGTGTTGTTCTTGTTTCTGCAGCAATTCTGGCGAAGATTC
TCCTTCGATTCATTCGCTTTTGCGGTCGATGGGTCTTCCAGCAGGGCTGGTGCCGAAGCAAGTGAAATCTTACACACATGAAAATGGTCGGTTGGAAGTGTATTTGGATG
CTCCATGTATGGCGAAATATGAGAACAGAGTGATTTTCGACACTGTTTTTAGTGCTAATCTTAGCTATGGCAGCTTGATTGGAGTGGAGGGTATGTCTCAAGAGGAGCTT
TTTCTATGGCTCCCTGTTAAAGATATCATTGTTAATTACCCTACTTCTGGTGTCATTCTTATTGACATTGGTGTTGCTCATAAACAACTCTCTTTGTCTCTCTTTGAAGA
TCCTCCTGATTGTAAACCTCAAGGTGAATTTTCACTTATTTCTCCTCTCTCTCTCTTGATTTTCATGGGGTTTGCCTGA
Protein sequenceShow/hide protein sequence
MAALFGSWNLRTRISILIILLVGLCCSCFCSNSGEDSPSIHSLLRSMGLPAGLVPKQVKSYTHENGRLEVYLDAPCMAKYENRVIFDTVFSANLSYGSLIGVEGMSQEEL
FLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCKPQGEFSLISPLSLLIFMGFA