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Lsi04G012830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:20253449..20265023
RNA-Seq ExpressionLsi04G012830
SyntenyLsi04G012830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036794.1 uncharacterized protein E6C27_scaffold20G00830 [Cucumis melo var. makuwa]1.3e-2075.32Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KVTVPPKRDWKQMGHEEA VAVHEE+KRVQ+ PSNS+YATHRLR            RTVSQEEELELLF+GLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
XP_004150100.1 uncharacterized protein LOC101214758 [Cucumis sativus]8.1e-1870.13Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KV VP KRDWKQMGHE A VAVHEE+KRVQ+ PSNS+YATHRLR            RT+SQEEELELLF+GLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
XP_022139403.1 uncharacterized protein LOC111010342 [Momordica charantia]4.0e-1766.23Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KV+ PPK +WKQMGHEE  V VH+E+KRVQ+LPSNS+YATHR R            RT SQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
XP_023535148.1 uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo]5.8e-1667.53Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        MEGKV+V PK D KQMGH+EA V V EE+KRVQ+LPSNS+YATHR+R            RT SQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
XP_038898294.1 uncharacterized protein LOC120085994 [Benincasa hispida]4.8e-1872.73Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        MEGK TV PKR WKQM H+EA  AVHEE+KRVQRLPSNS+YATHRLR            RTVSQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
TrEMBL top hitse value%identityAlignment
A0A0A0LFX0 Uncharacterized protein3.9e-1870.13Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KV VP KRDWKQMGHE A VAVHEE+KRVQ+ PSNS+YATHRLR            RT+SQEEELELLF+GLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
A0A5A7SZV0 Uncharacterized protein6.5e-2175.32Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KVTVPPKRDWKQMGHEEA VAVHEE+KRVQ+ PSNS+YATHRLR            RTVSQEEELELLF+GLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
A0A6J1CCW1 uncharacterized protein LOC1110103421.9e-1766.23Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        ME KV+ PPK +WKQMGHEE  V VH+E+KRVQ+LPSNS+YATHR R            RT SQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
A0A6J1F6C2 uncharacterized protein LOC1114425873.7e-1667.53Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        MEGKV+V PK + KQMGH+EA V V EE+KRVQ+LPSNS+YATHRLR            RT SQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
A0A6J1IHD5 uncharacterized protein LOC1114769583.7e-1667.53Show/hide
Query:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        MEGKV+V PK + KQMGH+EA V V EE+KRVQ+LPSNS+YATHRLR            RT SQEEELELLFAGLSL
Subjt:  MEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13677.1 unknown protein4.2e-0451.43Show/hide
Query:  WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR
        W +M  +E +  + EE+KRV +LPSNS YA HRL+
Subjt:  WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR
AT3G13677.2 unknown protein9.6e-0949.23Show/hide
Query:  WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL
        W +M  +E +  + EE+KRV +LPSNS YA HRL+            RT+SQE+ELELLF  LSL
Subjt:  WKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLR------------RTVSQEEELELLFAGLSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTATCCCGGAGATTTTGTCCTGCCGCTGGGGGCGCTGAAGGTTGTGCAACAGCGAAACCGATTGTGATTTGTACAATGGAAGGTAAAGTCACTGTCCCACCTAA
AAGAGACTGGAAACAAATGGGACATGAAGAGGCGAACGTGGCTGTTCATGAAGAAGTGAAACGAGTGCAACGGCTTCCTTCTAACAGTTCCTATGCTACTCATCGGTTGC
GGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTGCTGGGCTTTCTTTAAAGAAGAGAATAGAGGCTAGAAGTGAAGGAAGTTTGTATACCAGAGAGCTCGAC
TTCGACGAAGGATATGTCACAGCAATATCGCCTGAGATGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTATCCCGGAGATTTTGTCCTGCCGCTGGGGGCGCTGAAGGTTGTGCAACAGCGAAACCGATTGTGATTTGTACAATGGAAGGTAAAGTCACTGTCCCACCTAA
AAGAGACTGGAAACAAATGGGACATGAAGAGGCGAACGTGGCTGTTCATGAAGAAGTGAAACGAGTGCAACGGCTTCCTTCTAACAGTTCCTATGCTACTCATCGGTTGC
GGAGAACTGTATCTCAGGAAGAGGAACTGGAGTTGCTGTTTGCTGGGCTTTCTTTAAAGAAGAGAATAGAGGCTAGAAGTGAAGGAAGTTTGTATACCAGAGAGCTCGAC
TTCGACGAAGGATATGTCACAGCAATATCGCCTGAGATGTGGTAA
Protein sequenceShow/hide protein sequence
MALSRRFCPAAGGAEGCATAKPIVICTMEGKVTVPPKRDWKQMGHEEANVAVHEEVKRVQRLPSNSSYATHRLRRTVSQEEELELLFAGLSLKKRIEARSEGSLYTRELD
FDEGYVTAISPEMW