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Lsi04G012970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondefensin-like protein 1
Genome locationchr04:20493830..20494559
RNA-Seq ExpressionLsi04G012970
SyntenyLsi04G012970
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150110.1 defensin-like protein 1 [Cucumis sativus]1.9e-3176.19Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+SAK++VALLFLLALMLSMNE +GVVEA +CE+RSKTWSG+C  T HCDRQCKNWEGA HGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

XP_008454663.1 PREDICTED: defensin-like protein 1 [Cucumis melo]5.7e-3175Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+SAK++VA LFLLAL LSMNE +GVVEA +CE+RSKTWSG+C  T HCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]1.8e-2973.81Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K + +SAK+ VA LFL ALMLSMNE  GVVEA +CE+RSKTWSG+C  TSHCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

XP_038899387.1 defensin-like protein 1 [Benincasa hispida]2.9e-3584.52Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        MGK+VG+SAK+ VALLFLL LMLSMNE RG VEA LC++RSKTWSGYCAITSHCDRQCKNWEGA HGACHDH PGKACYCYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

XP_038900009.1 defensin-like protein 1 [Benincasa hispida]1.1e-3177.38Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+ A++VVALLFLLALMLSMNE +G+VEA +CEKRSKTWSG+C  TSHCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein9.4e-3276.19Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+SAK++VALLFLLALMLSMNE +GVVEA +CE+RSKTWSG+C  T HCDRQCKNWEGA HGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

A0A1S3BZX7 defensin-like protein 12.7e-3175Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+SAK++VA LFLLAL LSMNE +GVVEA +CE+RSKTWSG+C  T HCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

A0A5A7T656 Defensin-like protein 12.7e-3175Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K+VG+SAK++VA LFLLAL LSMNE +GVVEA +CE+RSKTWSG+C  T HCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

A0A6J1FBE9 defensin-like protein 12.6e-2973.81Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K + SSAK+ VA LFL ALMLSMN   GVVEA +CE+RSKTWSG+C  TSHCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

A0A6J1IJY9 defensin-like protein 18.8e-3073.81Show/hide
Query:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        M K + +SAK+ VA LFL ALMLSMNE  GVVEA +CE+RSKTWSG+C  TSHCDRQCKNWEGAKHGACH  FPG+AC+CYF+C
Subjt:  MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

SwissProt top hitse value%identityAlignment
O24332 Defensin-like protein 31.6e-1247.95Show/hide
Query:  VVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        +VALLF   ++ +  E   VVEA LCE+ S TWSG C   + C  QC   EGA+HG+C+  FP   C CYF C
Subjt:  VVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

P0C8Y4 Defensin-like protein 11.7e-1465.31Show/hide
Query:  LCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        LCEK SKTWSG C  T HCD QCK+WEGA HGACH       C+CYF+C
Subjt:  LCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

P22357 Anther-specific protein SF18 (Fragment)2.5e-1356.6Show/hide
Query:  VEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        V   +CEK SKTW G C  T  CD++C +WEGAKHGACH       C+CYFDC
Subjt:  VEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

P82787 Defensin-like protein 194.8e-1748.05Show/hide
Query:  SAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        ++   + L   L++ L  +     VE  +CE+RSKTW+G+C  T  CD QCK WE A HGACH  FPG AC+CYF+C
Subjt:  SAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

Q7M1F2 Defensin-like protein 11.9e-1362Show/hide
Query:  NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        NLCE+ S TW+G C  T HCD QC+NWE AKHGACH     K C+CYF+C
Subjt:  NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein3.4e-1848.05Show/hide
Query:  SAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        ++   + L   L++ L  +     VE  +CE+RSKTW+G+C  T  CD QCK WE A HGACH  FPG AC+CYF+C
Subjt:  SAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

AT2G26010.1 plant defensin 1.33.7e-1243.75Show/hide
Query:  VGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        +  SA I+  L   L L  +      V    LCEK S TWSG C  ++ C  QC N EGAKHG+C+  FP   C CYF C
Subjt:  VGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

AT2G26020.1 plant defensin 1.2b4.1e-1141.89Show/hide
Query:  VVALLFLLALMLSMNETRGVVEA-NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        ++  ++   ++ +  E   +VEA  LCEK S TWSG C  ++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  VVALLFLLALMLSMNETRGVVEA-NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

AT5G44420.1 plant defensin 1.28.2e-1243.24Show/hide
Query:  VVALLFLLALMLSMNETRGVVEA-NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        ++ L+F   ++ +  +   +VEA  LCEK S TWSG C  ++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  VVALLFLLALMLSMNETRGVVEA-NLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC

AT5G44430.1 plant defensin 1.2C1.4e-1142.5Show/hide
Query:  VGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC
        +  SA I+  L   L L  +      V    LCEK S TWSG C  ++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  VGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGATTGTGGGTAGCTCTGCCAAGATAGTTGTTGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGAAACGCGAGGGGTGGTGGAGGCAAACTTGTG
TGAGAAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCGACCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGATCACTTTC
CTGGAAAGGCTTGTTATTGCTACTTCGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ACAAAATTCATAAAGAATTAAAACAATAGAAATGGGCAAGATTGTGGGTAGCTCTGCCAAGATAGTTGTTGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATG
AAACGCGAGGGGTGGTGGAGGCAAACTTGTGTGAGAAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCGACCGACAATGCAAGAATTGGGAAGGT
GCCAAACATGGAGCTTGCCATGATCACTTTCCTGGAAAGGCTTGTTATTGCTACTTCGATTGTTGAAAGCCATGCAATAACCTTATGATATATGATGATGATGATAATCT
CCTTCTTCATATCATTTCCCTTTTAAAAAAAATAAAAGTTTCAGTAACTTATTATATGTTTTCTTATATGGGTGTGAAGGGATCTATATGTAATATTAGTTTTTAATTAA
TGTTTTTATGTGGTTGGAAAAGTGAGTGTATTGTGGTTTGTGTTATAAATATGCTGCTATTTATCTTTGGCAGCTTGTTTGTGTGTTCCTTCTTCTTTCATATCTGAATA
TTGAATAAAATGACTTTGATAAATTAGTTTTCTAGTGTA
Protein sequenceShow/hide protein sequence
MGKIVGSSAKIVVALLFLLALMLSMNETRGVVEANLCEKRSKTWSGYCAITSHCDRQCKNWEGAKHGACHDHFPGKACYCYFDC