; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G012990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G012990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAC domain protein
Genome locationchr04:20532798..20533094
RNA-Seq ExpressionLsi04G012990
SyntenyLsi04G012990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]9.2e-4190.82Show/hide
Query:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES
        MPTIFQSQP PRRS SVAGREA RTR VRSTCRS SFGGMVRGGRNLMA+PGD+CRRNQGSREVLRRALMPPSRRP+LRWMNFRPTPSRLS MSMAES
Subjt:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2469.39Show/hide
Query:  MPTIFQSQPQPRRSTSVAG--REASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMA
        MPTIFQSQ QP    S AG  RE  R+R++RS CRS SFGG+ RGGRN+ A  GDK RR QG RE+LRRAL PP+RRP+LRW+NFR TPSRLSNMSMA
Subjt:  MPTIFQSQPQPRRSTSVAG--REASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-3175.25Show/hide
Query:  MPTIFQSQPQPRRSTSV---AGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAE
        MPTIFQSQPQP R  S+   AGRE S  R++RSTCRSFSF GMVR GRN+M   GDK RRNQG REVLRRALMPP+R+P+LRW+NFRPTPSRLSNMSMAE
Subjt:  MPTIFQSQPQPRRSTSV---AGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAE

Query:  S
        +
Subjt:  S

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]1.7e-3987.76Show/hide
Query:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES
        MPTIFQSQP PRR+ SVAGRE  R R VRSTCRSFSFGGMVRGGRNLMA+PGD+CRRNQGSREVLRRALMPPSRRP+LRWMNFRPTPSRLS MSMAE+
Subjt:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]7.8e-4088.78Show/hide
Query:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES
        MPTIFQSQP PRR+ SVAGRE  R R VRSTCRSFSFGGMVRGGRNLMA+PGD+CRRNQGSREVLRRALMPPSRRP+LRWMNFRPTPSRLS MSMAES
Subjt:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES

TrEMBL top hitse value%identityAlignment
A0A0A0LD23 Uncharacterized protein3.8e-4088.78Show/hide
Query:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES
        MPTIFQSQP PRR+ SVAGRE  R R VRSTCRSFSFGGMVRGGRNLMA+PGD+CRRNQGSREVLRRALMPPSRRP+LRWMNFRPTPSRLS MSMAES
Subjt:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES

A0A4U5P590 Uncharacterized protein6.7e-1352.63Show/hide
Query:  QPQPRRSTSVAGR------EASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMA
        QP  R+S     R      EAS +   RSTC   +  G VR  ++   VP DK RRNQ + E+LRRAL PP+RR +LRW NF+PTPSRLSNMSMA
Subjt:  QPQPRRSTSVAGR------EASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMA

A0A5A7T5L7 Uncharacterized protein4.4e-4190.82Show/hide
Query:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES
        MPTIFQSQP PRRS SVAGREA RTR VRSTCRS SFGGMVRGGRNLMA+PGD+CRRNQGSREVLRRALMPPSRRP+LRWMNFRPTPSRLS MSMAES
Subjt:  MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES

A0A6N2MHB8 Uncharacterized protein2.5e-1248.15Show/hide
Query:  MPTIFQSQ-----PQPRRSTSVAGREASRTRTV-------RSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPS
        M TI Q Q     P P R +   G  A R           RSTC   +  G VR  ++   VP D+ RR+Q +RE+LRRAL PP+RR +LRW NF+PTPS
Subjt:  MPTIFQSQ-----PQPRRSTSVAGREASRTRTV-------RSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPS

Query:  RLSNMSMA
        RLSNMSMA
Subjt:  RLSNMSMA

B9N1L2 Uncharacterized protein2.5e-1248.15Show/hide
Query:  MPTIFQSQPQ-----PRRSTSVAGREASRTRTV-------RSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPS
        M TI Q Q +     P R +   G    R   V       RSTC   +  G VR  ++   VP DK RRNQ + E+LRRAL PP+RR +LRW NF+PTPS
Subjt:  MPTIFQSQPQ-----PRRSTSVAGREASRTRTV-------RSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPS

Query:  RLSNMSMA
        RLSNMSMA
Subjt:  RLSNMSMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein1.8e-1051.43Show/hide
Query:  VRSTCRSFSFGGMVRGGRNLMAVPGDK---CRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMS
        VR  C      G  +  R+   VP D+    + + GSREVLRRAL PP RR +LRW+NFRPTPSRL  MS
Subjt:  VRSTCRSFSFGGMVRGGRNLMAVPGDK---CRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGACAATTTTTCAGTCCCAACCCCAGCCTCGTCGGAGCACCTCCGTCGCCGGACGGGAAGCCAGCCGGACCCGTACCGTTAGATCCACTTGCAGGAGCTTCAGTTT
TGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGGTGCCCGGAGATAAGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTGAGAAGGGCTTTGATGCCGCCTAGCC
GGAGACCCTCTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGCCTTTCGAATATGTCAATGGCGGAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGACAATTTTTCAGTCCCAACCCCAGCCTCGTCGGAGCACCTCCGTCGCCGGACGGGAAGCCAGCCGGACCCGTACCGTTAGATCCACTTGCAGGAGCTTCAGTTT
TGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGGTGCCCGGAGATAAGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTGAGAAGGGCTTTGATGCCGCCTAGCC
GGAGACCCTCTCTCCGGTGGATGAATTTCCGGCCAACTCCCAGTCGCCTTTCGAATATGTCAATGGCGGAGAGTTAA
Protein sequenceShow/hide protein sequence
MPTIFQSQPQPRRSTSVAGREASRTRTVRSTCRSFSFGGMVRGGRNLMAVPGDKCRRNQGSREVLRRALMPPSRRPSLRWMNFRPTPSRLSNMSMAES