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Lsi04G013310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G013310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:21098667..21099041
RNA-Seq ExpressionLsi04G013310
SyntenyLsi04G013310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064333.1 hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]1.9e-1958.73Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASRLILKD K PLRFLLRNPASSAPSAQ IQNLLLP  IPRQ  SGFLG  V +  RP LS   N S DGG RIEVRGK+E +    D+  E +S+ + 
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSDEFSG--DEFSDDDDAETGDNEN
        EC D F    D+F D D+ E  D+++
Subjt:  ECSDEFSG--DEFSDDDDAETGDNEN

KAE8649846.1 hypothetical protein Csa_012085 [Cucumis sativus]3.4e-1656.45Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASRLILKD K PLRFLLRNPASSAPSAQ IQNLLLP  IPRQS    L   V + DRP LS  LN   DGG RIEVRG+++ ++ + D+  E +S+ + 
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSDEFSGDEFSDDDDAETGDNEN
        E SDE   DE  D +D E  D+++
Subjt:  ECSDEFSGDEFSDDDDAETGDNEN

KAG6591964.1 hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2763.36Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASR ILKD K P+ FLLRNPASS P AQ+I N LLP   P QSASGFL  ++  SDRPLL R  N SFDGG RIEVRGK++PVIE++DE  + ES+ DF
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSD--------EFSGDEFSDDDDAETGDNE
        E SD        EFSG +FSDDDDAE GD+E
Subjt:  ECSD--------EFSGDEFSDDDDAETGDNE

XP_022936831.1 uncharacterized protein LOC111443300 [Cucurbita moschata]6.2e-2662.12Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASR ILKD K P+ FLLRNPASS P AQ+I N LLP   P QSASGFL  ++  SDRPLL R  N SFDGG RIEVRGK++PVIE++DE  +++S+ DF
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSD--------EFSGDEFS-DDDDAETGDNE
        E SD        EFSGD+FS DDDDAE GD++
Subjt:  ECSD--------EFSGDEFS-DDDDAETGDNE

XP_022976605.1 uncharacterized protein LOC111476951 [Cucurbita maxima]2.8e-2662.6Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASR ILKD K P+  LLRNPASS P AQ+IQN LLP   PRQSASGFL  ++  SDRPLL R  N SFDGG RIEVRGK++PVIE++DE  ++ESE D 
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSDEFSG--------DEFSDDDDAETGDNE
        E SD F+G        D+FSDDDDAE  D+E
Subjt:  ECSDEFSG--------DEFSDDDDAETGDNE

TrEMBL top hitse value%identityAlignment
A0A0A0L3F1 Uncharacterized protein4.3e-0978.85Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGND
        MASRLILKD K PLRFLLRNPASSAPSAQ IQNLLLP  IPRQS    L  D
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGND

A0A5A7V875 Uncharacterized protein9.3e-2058.73Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASRLILKD K PLRFLLRNPASSAPSAQ IQNLLLP  IPRQ  SGFLG  V +  RP LS   N S DGG RIEVRGK+E +    D+  E +S+ + 
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSDEFSG--DEFSDDDDAETGDNEN
        EC D F    D+F D D+ E  D+++
Subjt:  ECSDEFSG--DEFSDDDDAETGDNEN

A0A6J1F8K5 uncharacterized protein LOC1114433003.0e-2662.12Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASR ILKD K P+ FLLRNPASS P AQ+I N LLP   P QSASGFL  ++  SDRPLL R  N SFDGG RIEVRGK++PVIE++DE  +++S+ DF
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSD--------EFSGDEFS-DDDDAETGDNE
        E SD        EFSGD+FS DDDDAE GD++
Subjt:  ECSD--------EFSGDEFS-DDDDAETGDNE

A0A6J1IJY0 uncharacterized protein LOC1114769511.3e-2662.6Show/hide
Query:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF
        MASR ILKD K P+  LLRNPASS P AQ+IQN LLP   PRQSASGFL  ++  SDRPLL R  N SFDGG RIEVRGK++PVIE++DE  ++ESE D 
Subjt:  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDF

Query:  ECSDEFSG--------DEFSDDDDAETGDNE
        E SD F+G        D+FSDDDDAE  D+E
Subjt:  ECSDEFSG--------DEFSDDDDAETGDNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAACTCCCACTCCGATTTCTTCTCCGCAATCCAGCCTCATCCGCTCCTTCAGCACAAACCATTCAAAATCTTCTTCTTCC
AATAAGAATCCCAAGGCAATCCGCATCCGGATTCCTCGGTAACGACGTTTCTTCGAGCGATCGGCCGCTATTGTCTAGGGATTTGAATTGTAGTTTTGATGGCGGACTTA
GGATCGAGGTCAGAGGGAAGCGGGAGCCGGTGATTGAGGAGGTAGATGAGTTCAGCGAGAACGAGAGCGAGGGCGATTTCGAGTGCTCCGATGAGTTCAGTGGGGACGAA
TTTTCTGACGACGATGATGCGGAGACTGGGGATAATGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAACTCCCACTCCGATTTCTTCTCCGCAATCCAGCCTCATCCGCTCCTTCAGCACAAACCATTCAAAATCTTCTTCTTCC
AATAAGAATCCCAAGGCAATCCGCATCCGGATTCCTCGGTAACGACGTTTCTTCGAGCGATCGGCCGCTATTGTCTAGGGATTTGAATTGTAGTTTTGATGGCGGACTTA
GGATCGAGGTCAGAGGGAAGCGGGAGCCGGTGATTGAGGAGGTAGATGAGTTCAGCGAGAACGAGAGCGAGGGCGATTTCGAGTGCTCCGATGAGTTCAGTGGGGACGAA
TTTTCTGACGACGATGATGCGGAGACTGGGGATAATGAGAATTGA
Protein sequenceShow/hide protein sequence
MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLPIRIPRQSASGFLGNDVSSSDRPLLSRDLNCSFDGGLRIEVRGKREPVIEEVDEFSENESEGDFECSDEFSGDE
FSDDDDAETGDNEN