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Lsi04G013420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G013420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr04:21202150..21203059
RNA-Seq ExpressionLsi04G013420
SyntenyLsi04G013420
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064577.1 uncharacterized protein E6C27_scaffold255G002980 [Cucumis melo var. makuwa]3.3e-3789.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKM+PEDVKAAGV+ASKRPPGHHPGTILHQRRSLPYS TTMT+AGL++VGAIGYFTLYS+KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
XP_004145498.1 uncharacterized protein LOC101212329 [Cucumis sativus]3.7e-3687.21Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT+LHQRRSLPYS TTMT+AGL++VG IGY TLY+LKKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
XP_008452845.1 PREDICTED: uncharacterized protein LOC103493743 [Cucumis melo]3.3e-3789.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKM+PEDVKAAGV+ASKRPPGHHPGTILHQRRSLPYS TTMT+AGL++VGAIGYFTLYS+KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
XP_022940906.1 uncharacterized protein LOC111446354 [Cucurbita moschata]2.1e-3689.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT LHQRRSLPYSITTMTIAGL +VGAIGY TLY++KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
XP_022981851.1 uncharacterized protein LOC111480870 [Cucurbita maxima]2.1e-3689.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT LHQRRSLPYSITTMTIAGL +VGAIGY TLY++KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
TrEMBL top hitse value%identityAlignment
A0A0A0L315 Uncharacterized protein1.8e-3687.21Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT+LHQRRSLPYS TTMT+AGL++VG IGY TLY+LKKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
A0A1S3BVM2 uncharacterized protein LOC1034937431.6e-3789.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKM+PEDVKAAGV+ASKRPPGHHPGTILHQRRSLPYS TTMT+AGL++VGAIGYFTLYS+KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
A0A5A7VC84 Uncharacterized protein1.6e-3789.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKM+PEDVKAAGV+ASKRPPGHHPGTILHQRRSLPYS TTMT+AGL++VGAIGYFTLYS+KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
A0A6J1FJP6 uncharacterized protein LOC1114463541.0e-3689.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT LHQRRSLPYSITTMTIAGL +VGAIGY TLY++KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
A0A6J1IXP8 uncharacterized protein LOC1114808701.0e-3689.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
        MGSN EWRKNADTHKMKPEDVKAAGV+ASKRPPGHHPGT LHQRRSLPYSITTMTIAGL +VGAIGY TLY++KKPEASAKDVAK+
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein3.1e-2563.53Show/hide
Query:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAK
        M    +WRK ADT KM  E VKAAGV++SKRPPG +PG +LHQRR+LPYS TTM +AGL + GAI Y  +Y+ KKPEA+A DVAK
Subjt:  MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAATGGAGAGTGGAGGAAAAATGCAGATACGCACAAAATGAAGCCTGAAGATGTAAAAGCAGCAGGAGTCGATGCCTCCAAAAGGCCTCCAGGGCACCATCC
AGGCACAATCCTGCACCAGCGGCGGAGCCTCCCCTACAGCATCACCACCATGACAATCGCCGGTCTCGTTGTCGTCGGAGCCATCGGATATTTTACCTTATACTCCTTGA
AAAAGCCTGAAGCCTCTGCGAAAGATGTTGCCAAGATAACAGAAGCCCTGAGAACAAATGATCTGGCTATGGCAACAGAATTGTCATCATTCAAAATTGAGTACAACAGG
CTACATCTGAAAGCATCATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAATGGAGAGTGGAGGAAAAATGCAGATACGCACAAAATGAAGCCTGAAGATGTAAAAGCAGCAGGAGTCGATGCCTCCAAAAGGCCTCCAGGGCACCATCC
AGGCACAATCCTGCACCAGCGGCGGAGCCTCCCCTACAGCATCACCACCATGACAATCGCCGGTCTCGTTGTCGTCGGAGCCATCGGATATTTTACCTTATACTCCTTGA
AAAAGCCTGAAGCCTCTGCGAAAGATGTTGCCAAGATAACAGAAGCCCTGAGAACAAATGATCTGGCTATGGCAACAGAATTGTCATCATTCAAAATTGAGTACAACAGG
CTACATCTGAAAGCATCATCATAG
Protein sequenceShow/hide protein sequence
MGSNGEWRKNADTHKMKPEDVKAAGVDASKRPPGHHPGTILHQRRSLPYSITTMTIAGLVVVGAIGYFTLYSLKKPEASAKDVAKITEALRTNDLAMATELSSFKIEYNR
LHLKASS