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Lsi04G013530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G013530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationchr04:21287862..21291666
RNA-Seq ExpressionLsi04G013530
SyntenyLsi04G013530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649933.1 hypothetical protein Csa_011967 [Cucumis sativus]7.7e-4865.03Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQA---MSFLPTKIEIFISSNTLR
        M+SSV CK +IMAKSID + FA T+ +   SRFA NRVS IDSRL KSRICGVRASMVDSYGSSDFVKRMEQAWEISQA   +SFL +   + +    + 
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQA---MSFLPTKIEIFISSNTLR

Query:  RKRNRKMPNRDPLNLTNQRLFAALLATQMDMLSVNGVQELASLFSEIICFVKFLPETLAVSFVLARALCVAPTVREQATGPSG
         + ++           NQ LFAAL ATQMDMLS NGV+ELASLF EIICFVKFLPETLAVSFV AR L VA TV+ Q TGP+G
Subjt:  RKRNRKMPNRDPLNLTNQRLFAALLATQMDMLSVNGVQELASLFSEIICFVKFLPETLAVSFVLARALCVAPTVREQATGPSG

KAG6591516.1 hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2479.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

KAG7024403.1 hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2479.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

XP_022935899.1 uncharacterized protein LOC111442664 [Cucurbita moschata]1.6e-2479.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

XP_022977132.1 uncharacterized protein LOC111477293 [Cucurbita maxima]9.2e-2579.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        MTSSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RAS+VDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

TrEMBL top hitse value%identityAlignment
A0A0A0L478 Uncharacterized protein1.9e-2378.21Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV CK +IMAKSID + FA T+ +   SRFA NRVS IDSRL KSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A1S3BVK1 chaperone protein DnaJ4.2e-2378.21Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV CK +IMAKSIDG+ F ST+ +   SRFA  RVS IDSRL KSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A6J1CHM4 uncharacterized protein LOC1110117191.8e-1865.38Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M S V C+P+  AK IDGR F ST+I+  G+ FA   +SF DS++L  RICGVRASMVDS+GSSDF KRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A6J1F6R2 uncharacterized protein LOC1114426647.6e-2579.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        M+SSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RASMVDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

A0A6J1IHL0 uncharacterized protein LOC1114772934.5e-2579.49Show/hide
Query:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ
        MTSSV  +P+I+AKSIDGR F+ST+I+L GS FA NRVSF DSRLL SRICG RAS+VDSYGSSDFVKRMEQAWEISQ
Subjt:  MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTTCTGTGTATTGCAAGCCTTTGATTATGGCGAAATCGATTGACGGAAGAGAATTTGCTTCTACAAAAATAATGTTATTCGGTTCCAGATTTGCTACGAATCG
TGTTTCGTTCATCGATTCGAGGCTATTGAAGTCTAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCAT
GGGAGATCTCTCAGGCCATGTCATTCCTTCCAACGAAGATTGAAATATTCATTTCCTCTAATACTCTGAGGAGGAAGAGGAACCGCAAAATGCCTAATCGTGATCCGCTG
AACCTAACCAACCAACGCCTATTTGCTGCTCTTCTTGCAACTCAAATGGACATGTTGAGTGTAAATGGTGTACAGGAACTGGCTTCTTTATTCTCGGAGATAATATGCTT
TGTCAAGTTCCTTCCAGAAACACTAGCTGTGTCATTTGTGCTGGCAAGGGCTCTATGCGTTGCTCCGACTGTAAGGGAACAGGCTACCGGGCCAAGTGGTTGGGAGAACC
CCCCATCTCTAAATAGTTTGATTGGGTGCTGCCTGTCATCACTTCATATTGATTTGGCTCACACAAAGTGGTTTGATTCAACTTCTTTGACATCGTTAGCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCGTTCCGAATACCAAACATGAGGCGGGCCCGAAAGAAACCCTCCAAGATATCTTCCACTTTCTCGGCTCCGTGGCTTTCTTTGAATACCAGAGAATTTCTCTGGCGG
TTTGTGTTTCGAACGAAATCGCACAAGAAGAATCCTATTGCTTTTTCTTGGCGGAACGTGATTGAGACGAGAAGAAACAGAGAGAAATGACGAGTTCTGTGTATTGCAAG
CCTTTGATTATGGCGAAATCGATTGACGGAAGAGAATTTGCTTCTACAAAAATAATGTTATTCGGTTCCAGATTTGCTACGAATCGTGTTTCGTTCATCGATTCGAGGCT
ATTGAAGTCTAGGATTTGTGGCGTGCGAGCTTCCATGGTGGATTCTTATGGAAGCTCCGATTTCGTCAAGAGGATGGAGCAAGCATGGGAGATCTCTCAGGCCATGTCAT
TCCTTCCAACGAAGATTGAAATATTCATTTCCTCTAATACTCTGAGGAGGAAGAGGAACCGCAAAATGCCTAATCGTGATCCGCTGAACCTAACCAACCAACGCCTATTT
GCTGCTCTTCTTGCAACTCAAATGGACATGTTGAGTGTAAATGGTGTACAGGAACTGGCTTCTTTATTCTCGGAGATAATATGCTTTGTCAAGTTCCTTCCAGAAACACT
AGCTGTGTCATTTGTGCTGGCAAGGGCTCTATGCGTTGCTCCGACTGTAAGGGAACAGGCTACCGGGCCAAGTGGTTGGGAGAACCCCCCATCTCTAAATAGTTTGATTG
GGTGCTGCCTGTCATCACTTCATATTGATTTGGCTCACACAAAGTGGTTTGATTCAACTTCTTTGACATCGTTAGCTTTGTGA
Protein sequenceShow/hide protein sequence
MTSSVYCKPLIMAKSIDGREFASTKIMLFGSRFATNRVSFIDSRLLKSRICGVRASMVDSYGSSDFVKRMEQAWEISQAMSFLPTKIEIFISSNTLRRKRNRKMPNRDPL
NLTNQRLFAALLATQMDMLSVNGVQELASLFSEIICFVKFLPETLAVSFVLARALCVAPTVREQATGPSGWENPPSLNSLIGCCLSSLHIDLAHTKWFDSTSLTSLAL