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Lsi04G013600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G013600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr04:21340394..21341471
RNA-Seq ExpressionLsi04G013600
SyntenyLsi04G013600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037665.1 hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1960.78Show/hide
Query:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK
        IHYL SSSPR  HS DRS S MANQQQVDSRPWILD++PFIVVILIAAHVLAL                               YWIYRLATDNR QRRK
Subjt:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK

Query:  AH
        AH
Subjt:  AH

XP_008453078.1 PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo]1.2e-1959.8Show/hide
Query:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK
        +HY  S S RRY +RDRSPSAMANQQ VDSRPWILDV+PFIVVILI AHVLAL                              VYWIYRL TDNRPQRRK
Subjt:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK

Query:  AH
        AH
Subjt:  AH

XP_022935881.1 uncharacterized protein LOC111442654 [Cucurbita moschata]1.0e-1361.73Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MANQQQVDSRPWILDV+PFIVVILIAAHVLAL                              VYWIYRLATDNRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

XP_022977153.1 uncharacterized protein LOC111477303 [Cucurbita maxima]8.5e-1359.26Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MANQQQVDSRPWILDV+PFIV ILIAAHVLAL                              VYWIYRLAT+NRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

XP_023535177.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo]2.9e-1360.49Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MANQQQVDSRPWILD +PFIVVILIAAHVLAL                              VYWIYRLATDNRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

TrEMBL top hitse value%identityAlignment
A0A059CW86 Uncharacterized protein (Fragment)1.2e-0744.94Show/hide
Query:  SRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        S +  P  MAN QQ  SRPWI+D  P++VV+LIAAHV AL                              VYWIYRLAT+ +PQRRKAH
Subjt:  SRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

A0A0A0L5I3 Uncharacterized protein1.7e-1155.56Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MAN+  VDSRPWILDV+PFIVVILI AHVLAL                              VYWIYRL TDNRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

A0A1S3BWH4 uncharacterized protein LOC1034939025.9e-2059.8Show/hide
Query:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK
        +HY  S S RRY +RDRSPSAMANQQ VDSRPWILDV+PFIVVILI AHVLAL                              VYWIYRL TDNRPQRRK
Subjt:  IHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK

Query:  AH
        AH
Subjt:  AH

A0A6J1F6U7 uncharacterized protein LOC1114426544.9e-1461.73Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MANQQQVDSRPWILDV+PFIVVILIAAHVLAL                              VYWIYRLATDNRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

A0A6J1IQM9 uncharacterized protein LOC1114773034.1e-1359.26Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH
        MANQQQVDSRPWILDV+PFIV ILIAAHVLAL                              VYWIYRLAT+NRPQRRKAH
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein1.2e-0436.71Show/hide
Query:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK
        MA +Q +  RPW LD++P +VV+L AAHV+AL                               YWIYRLATD R Q ++
Subjt:  MANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCATTACCTTCAATCTTCTTCACCACGGAGGTATCATAGTCGCGATCGATCTCCATCTGCAATGGCGAACCAGCAACAGGTTGATTCAAGGCCGTGGATTCTCGA
TGTCATGCCTTTTATCGTTGTTATTCTAATTGCCGCACATGTTCTGGCTTTGGTACTTAAATCTCAACTTCAACCTCTACTTCTTCATTCTATTACACAGCCGCTTCAAG
TGCGAAGTTCATCATTTGATCTCGGAGTTTTTGTCTACTGGATTTACAGATTAGCGACGGATAACAGGCCTCAAAGGAGGAAAGCACATTGA
mRNA sequenceShow/hide mRNA sequence
CGAAAGTGCTTTTTGGTTGGGCCACAAATCCATGGTTTCAACGGAGCTTCTTCGACTGTGGATTATCTTATAGACGACCGGTGGCTTTTGCTCGGGCCGATCGGACTCCA
TTAACGATGATCCATTACCTTCAATCTTCTTCACCACGGAGGTATCATAGTCGCGATCGATCTCCATCTGCAATGGCGAACCAGCAACAGGTTGATTCAAGGCCGTGGAT
TCTCGATGTCATGCCTTTTATCGTTGTTATTCTAATTGCCGCACATGTTCTGGCTTTGGTACTTAAATCTCAACTTCAACCTCTACTTCTTCATTCTATTACACAGCCGC
TTCAAGTGCGAAGTTCATCATTTGATCTCGGAGTTTTTGTCTACTGGATTTACAGATTAGCGACGGATAACAGGCCTCAAAGGAGGAAAGCACATTGAAGAACAGTTTGA
TTTACTTTACGGAAGATAAGAAGGTTAGTGGAACCCTAATTCGTTGATTGTTATTGAAGCTCATAGCTGGAATGCTAACAGAAAAACGTGTTTGGTCCCATTTTTATTAC
TGGTTACTGTACCTAACAGTTGAGAATGATGTACAACAGATCCTTTCTTTAATGTCGATCGAATTAGGTTGCCTCCTCTGTTCAAGTGTTCATCCTTTGATCTGATCGAT
CAGTTTACTTATAGCCAATTCTCGCTTTCCGCCATGTTTTCAATTTCTTCAATTGCCTACAGTAACGTAACTGTGAACATAGTATACATCTGTAGGAGCAATGTTAGAAA
CTCATAATCGTCAATAAGTTTGCGATATCCAATGGATGGTTATACTTAACTATTCAATTTCGAGGGAATTATAAAATTAAAGCTGGATTGTAACTAATAGATCCCATTGC
CACACATTTTACTTTCTCACTTGCACATGTAGTATTGTCGGTTTTCTTCTTGTTGTTGAAGTATTGATATAATTAAAATTTTTGCAACCCATTAGCT
Protein sequenceShow/hide protein sequence
MIHYLQSSSPRRYHSRDRSPSAMANQQQVDSRPWILDVMPFIVVILIAAHVLALVLKSQLQPLLLHSITQPLQVRSSSFDLGVFVYWIYRLATDNRPQRRKAH