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Lsi04G013860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G013860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr04:21672031..21672390
RNA-Seq ExpressionLsi04G013860
SyntenyLsi04G013860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591490.1 hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia]7.4e-5388.98Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLG+LAVVSPLYIDRRPS +A+EEEESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWE
        LLLLAFVLKCKASL+ W+
Subjt:  LLLLAFVLKCKASLLFWE
XP_011654202.1 uncharacterized protein LOC105435317 [Cucumis sativus]3.3e-5392.44Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVG+GA SRRSRFSSYDR LAVGLGLLAVVSPLYIDRRPSIE  EEEESSI LGFWLPALLM LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFII
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWES
        LLLLAFVLKCKASL+FWES
Subjt:  LLLLAFVLKCKASLLFWES
XP_022936874.1 uncharacterized protein LOC111443331 [Cucurbita moschata]1.5e-5389.83Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLG+LAVVSPLYIDRRPS +A+EEEESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWE
        LLLLAFVLKCKASL+FW+
Subjt:  LLLLAFVLKCKASLLFWE
XP_022977145.1 uncharacterized protein LOC111477299 [Cucurbita maxima]5.2e-5490.68Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLG+LAVVSPLYIDRRPS +A+EEEESS+ LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWE
        LLLLAFVLKCKASL+FW+
Subjt:  LLLLAFVLKCKASLLFWE
XP_038899620.1 uncharacterized protein LOC120086878 [Benincasa hispida]4.7e-5594.96Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLGLLAVVSPLYIDRRPSIE  EEEESSI LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWES
        LLLLAFVLKCKASL+FWES
Subjt:  LLLLAFVLKCKASLLFWES
TrEMBL top hitse value%identityAlignment
A0A0A0L2W6 Uncharacterized protein1.6e-5392.44Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVG+GA SRRSRFSSYDR LAVGLGLLAVVSPLYIDRRPSIE  EEEESSI LGFWLPALLM LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFII
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWES
        LLLLAFVLKCKASL+FWES
Subjt:  LLLLAFVLKCKASLLFWES
A0A1S3BUL9 uncharacterized protein LOC1034937024.7e-5391.6Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVG+GA SRRSRFSSYDR LAVGLGLLAVVSPLYIDRRPSIE  EEEESSI LGFWLPALL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFII
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWES
        LLLLAFVLKCKASL+FWES
Subjt:  LLLLAFVLKCKASLLFWES
A0A5D3D907 Uncharacterized protein4.7e-5391.6Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVG+GA SRRSRFSSYDR LAVGLGLLAVVSPLYIDRRPSIE  EEEESSI LGFWLPALL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSSCGIFII
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWES
        LLLLAFVLKCKASL+FWES
Subjt:  LLLLAFVLKCKASLLFWES
A0A6J1F9J0 uncharacterized protein LOC1114433317.3e-5489.83Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLG+LAVVSPLYIDRRPS +A+EEEESS+ LGFWLPALL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWE
        LLLLAFVLKCKASL+FW+
Subjt:  LLLLAFVLKCKASLLFWE
A0A6J1ILG7 uncharacterized protein LOC1114772992.5e-5490.68Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        MEVGIGATSRRSRFSSYDR +AVGLG+LAVVSPLYIDRRPS +A+EEEESS+ LGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFI+
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKASLLFWE
        LLLLAFVLKCKASL+FW+
Subjt:  LLLLAFVLKCKASLLFWE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G21910.1 unknown protein9.8e-1948.67Show/hide
Query:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII
        ME G  ++    RF++  +LLA+ L +LAV+SPLYIDR  S E  EEEE      F    LL+ LI  IA  L+ +    RFD YWIHR+ GS  G+ +I
Subjt:  MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFII

Query:  LLLLAFVLKCKAS
        L+LL FVL CKAS
Subjt:  LLLLAFVLKCKAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTGGGATTGGTGCTACGTCGAGGAGGAGCCGGTTTTCTTCCTACGACCGGCTGTTGGCAGTAGGACTCGGCCTTCTTGCAGTGGTTTCGCCACTCTATATCGA
CCGGAGACCGAGCATCGAAGCAGACGAGGAGGAGGAATCATCCATTAAACTTGGCTTCTGGTTGCCTGCTCTTCTCATGACCTTGATCTTCATTATTGCTGGAGTGCTTC
ACTTGGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGT
AAAGCTTCTTTATTGTTCTGGGAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTGGGATTGGTGCTACGTCGAGGAGGAGCCGGTTTTCTTCCTACGACCGGCTGTTGGCAGTAGGACTCGGCCTTCTTGCAGTGGTTTCGCCACTCTATATCGA
CCGGAGACCGAGCATCGAAGCAGACGAGGAGGAGGAATCATCCATTAAACTTGGCTTCTGGTTGCCTGCTCTTCTCATGACCTTGATCTTCATTATTGCTGGAGTGCTTC
ACTTGGAACAGAGATGTGCTAGATTTGATGCTTATTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCATCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGT
AAAGCTTCTTTATTGTTCTGGGAGTCTTAG
Protein sequenceShow/hide protein sequence
MEVGIGATSRRSRFSSYDRLLAVGLGLLAVVSPLYIDRRPSIEADEEEESSIKLGFWLPALLMTLIFIIAGVLHLEQRCARFDAYWIHRVGGSSCGIFIILLLLAFVLKC
KASLLFWES