; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRRM domain-containing protein
Genome locationchr04:21866962..21869669
RNA-Seq ExpressionLsi04G014100
SyntenyLsi04G014100
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452748.1 PREDICTED: RNA-binding protein 2-like isoform X1 [Cucumis melo]1.6e-10077.96Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS
        MGDDAYTRY AS DRAGSVARSG+STYSEA PL SYPNSTSIDQWH  P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SGVSA GY SPF DS
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS

Query:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE
        LASQR+DIAVGSSPGVMG ADIGHERANSLS +RTAECDP S RESNILFVDGLPTDCTRREVG +  P+               SGDKA VLCFVEF+E
Subjt:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE

Query:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        A++++AAMEALQGYKFDDKK DSPALKIQFAHFPFRLPSNHDDR+
Subjt:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

XP_008452749.1 PREDICTED: RNA-binding protein 2-like isoform X2 [Cucumis melo]8.7e-9977.55Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS
        MGDDAYTRY AS DR GSVARSG+STYSEA PL SYPNSTSIDQWH  P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SGVSA GY SPF DS
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS

Query:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE
        LASQR+DIAVGSSPGVMG ADIGHERANSLS +RTAECDP S RESNILFVDGLPTDCTRREVG +  P+               SGDKA VLCFVEF+E
Subjt:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE

Query:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        A++++AAMEALQGYKFDDKK DSPALKIQFAHFPFRLPSNHDDR+
Subjt:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]4.6e-10884.02Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL
        MGDDAYTRY AS DRAGSVARSG+STYSEA PLTSYPNSTSIDQWHI  DYLQKDTNS+GPGAYGYTDVGGI N+PEPVIG VASG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL

Query:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR
        ASQR+DIAVGSSPGVMGMAD  HERANSLSLRTAE DPNSSRESNILFVDGLPTDCTRREVG +  P+               SGDKAMVLCFVEFIEAR
Subjt:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR

Query:  YARAAMEALQ-GYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        YAR AMEALQ GYKFDDKK DSP+LKIQFAHFPFRLPSNHDDRR
Subjt:  YARAAMEALQ-GYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]1.9e-10984.36Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL
        MGDDAYTRY AS DRAGSVARSG+STYSEA PLTSYPNSTSIDQWHI  DYLQKDTNS+GPGAYGYTDVGGI N+PEPVIG VASG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL

Query:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR
        ASQR+DIAVGSSPGVMGMAD  HERANSLSLRTAE DPNSSRESNILFVDGLPTDCTRREVG +  P+               SGDKAMVLCFVEFIEAR
Subjt:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR

Query:  YARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        YAR AMEALQGYKFDDKK DSP+LKIQFAHFPFRLPSNHDDRR
Subjt:  YARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]2.5e-10683.61Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL
        MGDDAYTRY AS DR GSVARSG+STYSEA PLTSYPNSTSIDQWHI  DYLQKDTNS+GPGAYGYTDVGGI N+PEPVIG VASG SAKGYTSPFEDSL
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL

Query:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR
        ASQR+DIAVGSSPGVMGMAD  HERANSLSLRTAE DPNSSRESNILFVDGLPTDCTRREVG +  P+               SGDKAMVLCFVEFIEAR
Subjt:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR

Query:  YARAAMEALQ-GYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        YAR AMEALQ GYKFDDKK DSP+LKIQFAHFPFRLPSNHDDRR
Subjt:  YARAAMEALQ-GYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

TrEMBL top hitse value%identityAlignment
A0A0A0L0S1 RRM domain-containing protein5.5e-9976.02Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI--PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFED
        MGDDAYTRY AS DRAGSVARSG+STYSEA PL SYPNSTSIDQWH   P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SG SA GY SPF D
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI--PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFED

Query:  SLASQRKDIAVGSSPGVMGMADIGHERANSLSL-RTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFI
        SLASQR+DIAVGSSPGVMG ADIGHERANSL+L RTAECDP+  RESN+LFVDGLPTDCTRREVG +  P+               +GDKAMVLCFVEF+
Subjt:  SLASQRKDIAVGSSPGVMGMADIGHERANSLSL-RTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFI

Query:  EARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        EA++++AAMEALQGYKFDDKK DSP LKIQFAHFPF LPSNHDDRR
Subjt:  EARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

A0A1S3BU06 RNA-binding protein 2-like isoform X17.7e-10177.96Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS
        MGDDAYTRY AS DRAGSVARSG+STYSEA PL SYPNSTSIDQWH  P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SGVSA GY SPF DS
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS

Query:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE
        LASQR+DIAVGSSPGVMG ADIGHERANSLS +RTAECDP S RESNILFVDGLPTDCTRREVG +  P+               SGDKA VLCFVEF+E
Subjt:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE

Query:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        A++++AAMEALQGYKFDDKK DSPALKIQFAHFPFRLPSNHDDR+
Subjt:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

A0A1S3BUL5 RNA-binding protein 2-like isoform X24.2e-9977.55Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS
        MGDDAYTRY AS DR GSVARSG+STYSEA PL SYPNSTSIDQWH  P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SGVSA GY SPF DS
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS

Query:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE
        LASQR+DIAVGSSPGVMG ADIGHERANSLS +RTAECDP S RESNILFVDGLPTDCTRREVG +  P+               SGDKA VLCFVEF+E
Subjt:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE

Query:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        A++++AAMEALQGYKFDDKK DSPALKIQFAHFPFRLPSNHDDR+
Subjt:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

A0A5D3D938 RNA-binding protein 2-like isoform X17.7e-10177.96Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS
        MGDDAYTRY AS DRAGSVARSG+STYSEA PL SYPNSTSIDQWH  P DY+ +DTNSLGPGAYGYTD+GG   +PEPVIGGV SGVSA GY SPF DS
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHI-PSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDS

Query:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE
        LASQR+DIAVGSSPGVMG ADIGHERANSLS +RTAECDP S RESNILFVDGLPTDCTRREVG +  P+               SGDKA VLCFVEF+E
Subjt:  LASQRKDIAVGSSPGVMGMADIGHERANSLS-LRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIE

Query:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        A++++AAMEALQGYKFDDKK DSPALKIQFAHFPFRLPSNHDDR+
Subjt:  ARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

A0A6J1J4R2 RNA-binding protein 2-like3.7e-9575.72Show/hide
Query:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL
        MGDDAYTRY AS DRAGSVARSG+S YSEA PLTSYPNSTSID W IP DYLQK+T+S GPG YGYTDVGGI N+PEPVIGGV SGVSA G TSPF D+ 
Subjt:  MGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIGGVASGVSAKGYTSPFEDSL

Query:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR
        A QR DIAVGSSPG+M MAD GHE+ANSL LR  E  P S+ ESNILFVDGLPTDCTRREVG +  P+                GDKA VLCFVEFIEAR
Subjt:  ASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFIEAR

Query:  YARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR
        Y+RAAMEALQGYKFDDKK DS ALKIQFAHFPFRLPSNHDDRR
Subjt:  YARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A4.9e-1238.24Show/hide
Query:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV  I  P+ G +                +VLCFV+F     A  A+ ALQGY+ D+ +SDS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

F4HWF9 Nuclear speckle RNA-binding protein B1.9e-1133.87Show/hide
Query:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS
        D+G  + +S+     E  P     SN L+V+GLP++C+RREV  I  P+ G + +               VLCFV+F  +  A  A+ ALQ Y+ D+ + 
Subjt:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS

Query:  DSPALKIQFAHFPFRLPSNHDDRR
        DS  L++QF   P   P     RR
Subjt:  DSPALKIQFAHFPFRLPSNHDDRR

G7ID19 RNA-binding protein 21.3e-0932.12Show/hide
Query:  AVGSSPGVMGMADI----------GHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFI
        A+G   GV G  D+          G    +++S    E  P     S+ L+V+GLP+D T+REV  I  P+                G   ++LCFV+F 
Subjt:  AVGSSPGVMGMADI----------GHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPY---------------SGDKAMVLCFVEFI

Query:  EARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFR
            A  A+ ALQGYK D+   +S  L++QF+  P R
Subjt:  EARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFR

Q6JB11 Protein MATERNALLY EXPRESSED GENE 52.1e-0738.75Show/hide
Query:  SNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKSDSPA
        S+ L+++GLP +CTRREV  I  P+ G + +               VLCFV+F     A  A+EALQG+  DD    +PA
Subjt:  SNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKSDSPA

Q8H0P8 RNA-binding protein 11.2e-1029.81Show/hide
Query:  GIGNHPEPVIGGVASGVSAKGYTSPFEDSLASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSG
        GIG  P   +   ++ +   G   P    LA   + +  G  P +  ++  G E A    L   +  P        L+++GLP+DCTRREV  I  P+ G
Subjt:  GIGNHPEPVIGGVASGVSAKGYTSPFEDSLASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSG

Query:  DK--------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFP
         +               ++LCFV+F     A  A+ ALQGYK D+   +S  L++QF+ +P
Subjt:  DK--------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.3e-1233.87Show/hide
Query:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS
        D+G  + +S+     E  P     SN L+V+GLP++C+RREV  I  P+ G + +               VLCFV+F  +  A  A+ ALQ Y+ D+ + 
Subjt:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS

Query:  DSPALKIQFAHFPFRLPSNHDDRR
        DS  L++QF   P   P     RR
Subjt:  DSPALKIQFAHFPFRLPSNHDDRR

AT1G21320.2 nucleotide binding;nucleic acid binding1.3e-1233.87Show/hide
Query:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS
        D+G  + +S+     E  P     SN L+V+GLP++C+RREV  I  P+ G + +               VLCFV+F  +  A  A+ ALQ Y+ D+ + 
Subjt:  DIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAM---------------VLCFVEFIEARYARAAMEALQGYKFDDKKS

Query:  DSPALKIQFAHFPFRLPSNHDDRR
        DS  L++QF   P   P     RR
Subjt:  DSPALKIQFAHFPFRLPSNHDDRR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-1338.24Show/hide
Query:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV  I  P+ G +                +VLCFV+F     A  A+ ALQGY+ D+ +SDS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-1338.24Show/hide
Query:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD
        S  SN L+V+GLP++C+RREV  I  P+ G +                +VLCFV+F     A  A+ ALQGY+ D+ +SDS  L++QF+  P   P    
Subjt:  SRESNILFVDGLPTDCTRREVGRILAPYSGDK---------------AMVLCFVEFIEARYARAAMEALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHD

Query:  DR
         R
Subjt:  DR

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.0e-0437.88Show/hide
Query:  NILFVDGLPTDCTRREVGRIL----------APYSGDKAMVLCFVEFIEARYARAAMEALQGYKFD
        N LFV GLP D   RE+  +             Y+G    V+ F  F   R+A AAM  L G KFD
Subjt:  NILFVDGLPTDCTRREVGRIL----------APYSGDKAMVLCFVEFIEARYARAAMEALQGYKFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGGCGTGGGAGAACTGGAGAAGAGACGAGGCCGGGGGAGGGTTGCGGTTGCAGCCGAAGCGGAGCAGACGGCCAAGCCATGGGAGACGATGCTTATACCAG
ATACACCGCCTCAGTAGATAGAGCAGGAAGTGTAGCGAGATCTGGCATTTCAACCTACTCTGAAGCAGCTCCTTTGACATCTTACCCTAATTCGACCTCTATTGATCAGT
GGCACATCCCTTCTGATTATTTGCAGAAAGATACAAATTCATTAGGACCTGGAGCTTATGGATATACTGACGTAGGAGGCATTGGTAATCATCCAGAACCAGTTATTGGC
GGTGTGGCATCTGGAGTGAGTGCAAAAGGCTACACATCTCCTTTCGAAGATTCATTAGCAAGTCAAAGAAAAGACATTGCAGTGGGCAGTAGTCCAGGAGTGATGGGTAT
GGCTGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCAGAACTGCTGAATGTGATCCAAATTCATCTCGGGAATCAAACATTCTTTTCGTTGATGGACTTCCGACAG
ATTGTACTAGGAGAGAAGTAGGCCGTATCCTTGCACCTTATAGTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGTTCATTGAAGCAAGATATGCCCGGGCTGCAATG
GAAGCTCTTCAAGGTTACAAGTTCGATGACAAAAAGTCTGATTCCCCTGCTTTGAAGATTCAATTTGCACATTTTCCTTTCCGTTTACCATCTAACCATGATGACAGGCG
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGGCGTGGGAGAACTGGAGAAGAGACGAGGCCGGGGGAGGGTTGCGGTTGCAGCCGAAGCGGAGCAGACGGCCAAGCCATGGGAGACGATGCTTATACCAG
ATACACCGCCTCAGTAGATAGAGCAGGAAGTGTAGCGAGATCTGGCATTTCAACCTACTCTGAAGCAGCTCCTTTGACATCTTACCCTAATTCGACCTCTATTGATCAGT
GGCACATCCCTTCTGATTATTTGCAGAAAGATACAAATTCATTAGGACCTGGAGCTTATGGATATACTGACGTAGGAGGCATTGGTAATCATCCAGAACCAGTTATTGGC
GGTGTGGCATCTGGAGTGAGTGCAAAAGGCTACACATCTCCTTTCGAAGATTCATTAGCAAGTCAAAGAAAAGACATTGCAGTGGGCAGTAGTCCAGGAGTGATGGGTAT
GGCTGACATAGGTCATGAAAGGGCCAATTCTCTCAGTCTCAGAACTGCTGAATGTGATCCAAATTCATCTCGGGAATCAAACATTCTTTTCGTTGATGGACTTCCGACAG
ATTGTACTAGGAGAGAAGTAGGCCGTATCCTTGCACCTTATAGTGGAGATAAAGCTATGGTATTATGCTTTGTTGAGTTCATTGAAGCAAGATATGCCCGGGCTGCAATG
GAAGCTCTTCAAGGTTACAAGTTCGATGACAAAAAGTCTGATTCCCCTGCTTTGAAGATTCAATTTGCACATTTTCCTTTCCGTTTACCATCTAACCATGATGACAGGCG
ATGA
Protein sequenceShow/hide protein sequence
MDFGRGRTGEETRPGEGCGCSRSGADGQAMGDDAYTRYTASVDRAGSVARSGISTYSEAAPLTSYPNSTSIDQWHIPSDYLQKDTNSLGPGAYGYTDVGGIGNHPEPVIG
GVASGVSAKGYTSPFEDSLASQRKDIAVGSSPGVMGMADIGHERANSLSLRTAECDPNSSRESNILFVDGLPTDCTRREVGRILAPYSGDKAMVLCFVEFIEARYARAAM
EALQGYKFDDKKSDSPALKIQFAHFPFRLPSNHDDRR