; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnannotated protein
Genome locationchr04:21992730..21996238
RNA-Seq ExpressionLsi04G014240
SyntenyLsi04G014240
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CVH79746.1 hypothetical protein BN3658_02298 [Coriobacteriaceae bacterium CHKCI002]4.2e-1736.53Show/hide
Query:  DVACCKSDEAPEVTSFSPKMSSSATRPPMQTSRRASICLRETLVSSLSGNCATMPRAIPLGTMVALIC---LRPSTSGLGTTMWRSNRPGLTNALSKDSG
        D +CC       V  F P+ +  +    M+ +R A +    +L + +         ++P G  +   C    RP TSG  TT+WRS RPG  +A S  S 
Subjt:  DVACCKSDEAPEVTSFSPKMSSSATRPPMQTSRRASICLRETLVSSLSGNCATMPRAIPLGTMVALIC---LRPSTSGLGTTMWRSNRPGLTNALSKDSG

Query:  KFVAAMTIIPSFCLKPSSSTTE----------------------------------------NKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANI
        +FVAAM+   SF  KPS ST+                                         N+S T LAPTPTNIS+ S P   KNGTPASPA A A  
Subjt:  KFVAAMTIIPSFCLKPSSSTTE----------------------------------------NKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANI

Query:  VLPVPGGPTSRTPFGSLPP
        VLPVPGGPTSR P G   P
Subjt:  VLPVPGGPTSRTPFGSLPP

OPZ04250.1 hypothetical protein BWZ09_01928 [Alphaproteobacteria bacterium ADurb.BinA305]2.7e-1637.44Show/hide
Query:  MSSSATRPPMQTSRRASICLRE----TLVSSLSGNCATMPRAIPLGT----------MVALICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTI
        +S +++   ++T+RR     R     T+++  +     +PRA+  G+              I  RP+TSGLGTT WRS RPG ++A S  SG+ VAA+TI
Subjt:  MSSSATRPPMQTSRRASICLRE----TLVSSLSGNCATMPRAIPLGT----------MVALICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTI

Query:  IPSFCLKPSSSTT----------------------------------------ENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGP
         P +  KPS ST+                                         N S T  APTPTNIS+ S P  EK GT ASPAIALA+ VLPVPG P
Subjt:  IPSFCLKPSSSTT----------------------------------------ENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGP

Query:  TSRTPFGSLPP
        T  TP G  PP
Subjt:  TSRTPFGSLPP

PRK64322.1 hypothetical protein BV163_01491 [Haemophilus influenzae]4.5e-1943.32Show/hide
Query:  ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT----------------------------------------ENKSLTLL
        IC RP TSG  TT  RS RPG   A S  SG+ VAA+TI PS  LKPS ST                                          N S T  
Subjt:  ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT----------------------------------------ENKSLTLL

Query:  APTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNRYRPFKQRNQPLLIPLSSMSAPTPEINRKANAI
        APTPTNIS+ S P   KNGT ASPAIA A+ VLPVPGGPT R PFG LPPK  N    F  R +  + P SS ++  P  + K   I
Subjt:  APTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNRYRPFKQRNQPLLIPLSSMSAPTPEINRKANAI

RDX86758.1 hypothetical protein CR513_31878, partial [Mucuna pruriens]2.4e-2070.59Show/hide
Query:  PSFCLKPSSS----------TTENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNR
        P+FCLK  +             E +SLTL APTPT ISSNSLPLQEKNGTPASPAIALANIV PVPGGPTS+TPFGSLPP+RV R
Subjt:  PSFCLKPSSS----------TTENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNR

VDC33167.1 hypothetical protein XINFAN_03669 [Xinfangfangia humi]4.9e-1844.85Show/hide
Query:  PLGTMVA---LICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSST--------------------------------------
        P GT+ A    I  RP  SG GT +WRSNRPG ++A S  S   VAAM I PS    PS ST                                      
Subjt:  PLGTMVA---LICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSST--------------------------------------

Query:  --TENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN
            N S T LAPTPTNIS+ S P   KNGTPASPA+A A  VLPVPGGPTS  P G LPP R N
Subjt:  --TENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN

TrEMBL top hitse value%identityAlignment
A0A2S9S060 Uncharacterized protein2.2e-1943.32Show/hide
Query:  ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT----------------------------------------ENKSLTLL
        IC RP TSG  TT  RS RPG   A S  SG+ VAA+TI PS  LKPS ST                                          N S T  
Subjt:  ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT----------------------------------------ENKSLTLL

Query:  APTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNRYRPFKQRNQPLLIPLSSMSAPTPEINRKANAI
        APTPTNIS+ S P   KNGT ASPAIA A+ VLPVPGGPT R PFG LPPK  N    F  R +  + P SS ++  P  + K   I
Subjt:  APTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNRYRPFKQRNQPLLIPLSSMSAPTPEINRKANAI

A0A371G875 Uncharacterized protein (Fragment)1.1e-2070.59Show/hide
Query:  PSFCLKPSSS----------TTENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNR
        P+FCLK  +             E +SLTL APTPT ISSNSLPLQEKNGTPASPAIALANIV PVPGGPTS+TPFGSLPP+RV R
Subjt:  PSFCLKPSSS----------TTENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNR

A0A3P5XQK2 Uncharacterized protein2.4e-1844.85Show/hide
Query:  PLGTMVA---LICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSST--------------------------------------
        P GT+ A    I  RP  SG GT +WRSNRPG ++A S  S   VAAM I PS    PS ST                                      
Subjt:  PLGTMVA---LICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSST--------------------------------------

Query:  --TENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN
            N S T LAPTPTNIS+ S P   KNGTPASPA+A A  VLPVPGGPTS  P G LPP R N
Subjt:  --TENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN

A0A645F336 Uncharacterized protein3.1e-1842.35Show/hide
Query:  RAIPLGTMVAL-----ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT--------------------------------
        R+ P  T++ L     I  RP+ SG   T+WRS RPG ++A S  SG+ VAA T+ P +  +PS ST+                                
Subjt:  RAIPLGTMVAL-----ICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTT--------------------------------

Query:  --------ENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN
                 N S T LAPTPTNIS+ S PL  KNGTPAS A ALAN VLPVPGGP SR P G LPP  +N
Subjt:  --------ENKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVN

T1MW66 Uncharacterized protein2.0e-2091.67Show/hide
Query:  NKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRV
        N+SLTLLAPTPTNISSNSLPLQEK GTPASPAIALAN+V PVPGGPTSRTPFGSLPP+RV
Subjt:  NKSLTLLAPTPTNISSNSLPLQEKNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAAGCTACAATCACCGAAAAAAGAGGCAACAAGGCAGCAAGGAAGAGCAATGCCTTTAGCTTTGGCTGCAGCAGTAGCTGCCGCCGCCGCTGCTGCTGCTGCAGC
GGCTGCAGATGCAGCAGGGTTTGGCACTGAGGGTGGCACGGGGCCGCTTCTAAGAAGTTCTTCACTTCCTGTTCAATTAGAAGCCTTGTTTCTGTACTCATGCTTTTCCC
ATTGTCATCCAAGAGACGTTGCTTGCTGCAAATCAGATGAAGCACCAGAAGTGACTTCGTTTTCTCCAAAAATGAGCTCTTCAGCAACTCGTCCTCCCATGCAAACATCA
AGACGAGCAAGCATCTGTTTGCGGGAGACACTAGTTTCGTCCTTATCAGGCAATTGTGCAACCATGCCAAGAGCCATTCCTCTCGGAACAATGGTGGCCTTGATTTGCCT
TCGTCCTTCAACATCAGGATTAGGTACAACAATGTGGCGATCAAATCGACCAGGTCTTACTAATGCCTTGTCTAAAGACTCTGGAAAGTTTGTTGCTGCAATGACAATAA
TTCCTTCATTTTGCTTAAAGCCATCAAGTTCAACAACAGAAAACAAATCCCTCACTCTTCTAGCCCCAACACCAACAAACATCTCTTCAAACTCACTGCCGCTGCAGGAG
AAGAATGGTACCCCAGCTTCTCCAGCAATCGCTCTTGCTAACATTGTCTTGCCAGTTCCAGGTGGACCAACAAGTAGAACACCTTTTGGGAGCTTGCCACCCAAACGAGT
GAATCGCTACAGGCCGTTCAAACAGAGAAATCAACCTTTGCTAATTCCTCTATCCTCAATGAGTGCTCCTACACCAGAAATCAATAGAAAGGCCAATGCAATAGTGCGAA
TTGTACGCCAGAGCTGCTCCTTAAAGTGGCCCCCTTCAGTAGCCACCATATGGATGGGAGAACTTGAGGATCATTTCGACGGAATAGTTCTTTCAGATGAGCAACTTCAC
TGGCCTCATCGGCATCCCGCACTCTTCGAGCTAGATTCCCAACATAGCTCGACTGATATCTCTTCTGAGCCGCCAAGAATTTATATACTGCATAGCAATCGGGAGAAGAA
GCAAATAAACTTATTTCAAGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAAGCTACAATCACCGAAAAAAGAGGCAACAAGGCAGCAAGGAAGAGCAATGCCTTTAGCTTTGGCTGCAGCAGTAGCTGCCGCCGCCGCTGCTGCTGCTGCAGC
GGCTGCAGATGCAGCAGGGTTTGGCACTGAGGGTGGCACGGGGCCGCTTCTAAGAAGTTCTTCACTTCCTGTTCAATTAGAAGCCTTGTTTCTGTACTCATGCTTTTCCC
ATTGTCATCCAAGAGACGTTGCTTGCTGCAAATCAGATGAAGCACCAGAAGTGACTTCGTTTTCTCCAAAAATGAGCTCTTCAGCAACTCGTCCTCCCATGCAAACATCA
AGACGAGCAAGCATCTGTTTGCGGGAGACACTAGTTTCGTCCTTATCAGGCAATTGTGCAACCATGCCAAGAGCCATTCCTCTCGGAACAATGGTGGCCTTGATTTGCCT
TCGTCCTTCAACATCAGGATTAGGTACAACAATGTGGCGATCAAATCGACCAGGTCTTACTAATGCCTTGTCTAAAGACTCTGGAAAGTTTGTTGCTGCAATGACAATAA
TTCCTTCATTTTGCTTAAAGCCATCAAGTTCAACAACAGAAAACAAATCCCTCACTCTTCTAGCCCCAACACCAACAAACATCTCTTCAAACTCACTGCCGCTGCAGGAG
AAGAATGGTACCCCAGCTTCTCCAGCAATCGCTCTTGCTAACATTGTCTTGCCAGTTCCAGGTGGACCAACAAGTAGAACACCTTTTGGGAGCTTGCCACCCAAACGAGT
GAATCGCTACAGGCCGTTCAAACAGAGAAATCAACCTTTGCTAATTCCTCTATCCTCAATGAGTGCTCCTACACCAGAAATCAATAGAAAGGCCAATGCAATAGTGCGAA
TTGTACGCCAGAGCTGCTCCTTAAAGTGGCCCCCTTCAGTAGCCACCATATGGATGGGAGAACTTGAGGATCATTTCGACGGAATAGTTCTTTCAGATGAGCAACTTCAC
TGGCCTCATCGGCATCCCGCACTCTTCGAGCTAGATTCCCAACATAGCTCGACTGATATCTCTTCTGAGCCGCCAAGAATTTATATACTGCATAGCAATCGGGAGAAGAA
GCAAATAAACTTATTTCAAGCAATTTGA
Protein sequenceShow/hide protein sequence
MHKLQSPKKEATRQQGRAMPLALAAAVAAAAAAAAAAAADAAGFGTEGGTGPLLRSSSLPVQLEALFLYSCFSHCHPRDVACCKSDEAPEVTSFSPKMSSSATRPPMQTS
RRASICLRETLVSSLSGNCATMPRAIPLGTMVALICLRPSTSGLGTTMWRSNRPGLTNALSKDSGKFVAAMTIIPSFCLKPSSSTTENKSLTLLAPTPTNISSNSLPLQE
KNGTPASPAIALANIVLPVPGGPTSRTPFGSLPPKRVNRYRPFKQRNQPLLIPLSSMSAPTPEINRKANAIVRIVRQSCSLKWPPSVATIWMGELEDHFDGIVLSDEQLH
WPHRHPALFELDSQHSSTDISSEPPRIYILHSNREKKQINLFQAI