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Lsi04G014390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCRG16
Genome locationchr04:22117314..22117514
RNA-Seq ExpressionLsi04G014390
SyntenyLsi04G014390
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1689.06Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA
        A VSK SFMALVA+LF V S+AVAQSAESPAPAPASPATSVVPSLSVACVGAFVAL+FGSALKA
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]6.5e-0661.9Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK
        A VS+AS +AL+AI+FAV S+A   + E+PAP+PASPATS+ PS   ACV AFVAL FGS L+
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1689.06Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA
        A VSK SFMALVA+LF V S+AVAQSAESPAPAPASPATSVVPSLSVACVGAFVAL+FGSALKA
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.6e-1585.94Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA
        A VSK SFMALVA+LFAV S+AVAQSAESPAP PASPA SVVPSLS ACVGAF+ALLFGSALKA
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]1.2e-0453.97Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK
        A +SK S +AL+A++FA+ S+A   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein5.9e-0553.97Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK
        A +SK S +AL+A++FA+ S+A   + E+PAP+PASPATS+ PS   AC+ AF+AL FGS L+
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALK

Q96504 CRG161.3e-1585.94Show/hide
Query:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA
        A VSK SFMALVA+LFAV S+AVAQSAESPAP PASPA SVVPSLS ACVGAF+ALLFGSALKA
Subjt:  AVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTCGTCTCTAAGGCTTCTTTCATGGCTCTTGTAGCCATCTTGTTCGCCGTCTTCTCTATTGCCGTCGCACAATCTGCAGAGTCTCCTGCTCCTGCTCCGGC
TTCTCCTGCTACCTCTGTTGTACCGTCGTTGAGTGTCGCTTGCGTTGGTGCTTTCGTCGCTCTCCTCTTTGGATCTGCACTCAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGTCGTCTCTAAGGCTTCTTTCATGGCTCTTGTAGCCATCTTGTTCGCCGTCTTCTCTATTGCCGTCGCACAATCTGCAGAGTCTCCTGCTCCTGCTCCGGC
TTCTCCTGCTACCTCTGTTGTACCGTCGTTGAGTGTCGCTTGCGTTGGTGCTTTCGTCGCTCTCCTCTTTGGATCTGCACTCAAAGCTTGA
Protein sequenceShow/hide protein sequence
MAAVVSKASFMALVAILFAVFSIAVAQSAESPAPAPASPATSVVPSLSVACVGAFVALLFGSALKA