; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEmbryo defective 1273, putative
Genome locationchr04:22255878..22256941
RNA-Seq ExpressionLsi04G014490
SyntenyLsi04G014490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064476.1 putative Embryo defective 1273 [Cucumis melo var. makuwa]8.5e-8577.29Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L G RRATL SS+KVKMARFMDSN MP+EIENLKEKMQ+VVPEPVK FPWKEAEKILVERL+FMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG+GSFFIL KLI YGFAIQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQG
        GLMQVLWLWRN  ++RNQPNEQSPFVGQG
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQG

XP_004141304.1 uncharacterized protein LOC101205191 [Cucumis sativus]8.8e-8275.32Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L+G RRATL SS+KVKMARFMDSN +P+EIENLKEKMQEVVPEPVK FPWKEAEKI+VERL FMGKETLK SLLLFFVLSS SD 
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG GSFFIL KLI YGFAIQA  FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN  R+RNQPNEQS FVGQ TS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

XP_008452688.1 PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo]7.7e-8677.49Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L G RRATL SS+KVKMARFMDSN MP+EIENLKEKMQ+VVPEPVK FPWKEAEKILVERL+FMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG+GSFFIL KLI YGFAIQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN  ++RNQPNEQSPFVGQGTS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

XP_022935804.1 uncharacterized protein LOC111442603 [Cucurbita moschata]4.1e-7973.04Show/hide
Query:  LKEKASF--NSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDFV
        LKEK SF  NSCL L GSRRAT+A SMK KMA FMDSNSMP++IENLKEKMQEV+PEPVK FPWK+AEKILVERLLFMGKET+K S+LLFF +SS SDFV
Subjt:  LKEKASF--NSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDFV

Query:  ASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANGG
        ASIV+NQELLIPIGLF GVLLT+LLKEISQE FGNSE                       +S FKKQLYGLGSFF+L KLI YG  IQ QTFPL VANGG
Subjt:  ASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANGG

Query:  LMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        LMQVLWLW+N SR+RN  NEQSP VGQGTS
Subjt:  LMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

XP_038900238.1 uncharacterized protein LOC120087328 [Benincasa hispida]2.1e-9180.95Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  KEK SFNSCLLLYGSR+ATLA+SMKVKMARFMDSNSMP+EIE+LKEKMQEVVPEPVK FPWKEAEKILVERLLFMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRN+ELLIPIGLFIGVLLTDLLKEISQE FG S                       +ESIFKKQLYGLGSFF+L KLIAYGF IQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN SR+RN+PNEQSPFVGQGTS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N8 Uncharacterized protein4.3e-8275.32Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L+G RRATL SS+KVKMARFMDSN +P+EIENLKEKMQEVVPEPVK FPWKEAEKI+VERL FMGKETLK SLLLFFVLSS SD 
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG GSFFIL KLI YGFAIQA  FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN  R+RNQPNEQS FVGQ TS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

A0A1S3BVL5 uncharacterized protein LOC1034936343.7e-8677.49Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L G RRATL SS+KVKMARFMDSN MP+EIENLKEKMQ+VVPEPVK FPWKEAEKILVERL+FMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG+GSFFIL KLI YGFAIQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN  ++RNQPNEQSPFVGQGTS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

A0A5A7VDP4 Putative Embryo defective 12734.1e-8577.29Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L G RRATL SS+KVKMARFMDSN MP+EIENLKEKMQ+VVPEPVK FPWKEAEKILVERL+FMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG+GSFFIL KLI YGFAIQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQG
        GLMQVLWLWRN  ++RNQPNEQSPFVGQG
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQG

A0A5D3D973 Putative Embryo defective 12733.7e-8677.49Show/hide
Query:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF
        II  K K + NSC  L G RRATL SS+KVKMARFMDSN MP+EIENLKEKMQ+VVPEPVK FPWKEAEKILVERL+FMGKETLK SLLLFFVLSSFSDF
Subjt:  IIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDF

Query:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG
        VASIVRNQELLIPIGLFIGVLLTDLLKEISQE FGNSE                       ES FKKQLYG+GSFFIL KLI YGFAIQAQ FPL VANG
Subjt:  VASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANG

Query:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        GLMQVLWLWRN  ++RNQPNEQSPFVGQGTS
Subjt:  GLMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

A0A6J1F6G5 uncharacterized protein LOC1114426032.0e-7973.04Show/hide
Query:  LKEKASF--NSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDFV
        LKEK SF  NSCL L GSRRAT+A SMK KMA FMDSNSMP++IENLKEKMQEV+PEPVK FPWK+AEKILVERLLFMGKET+K S+LLFF +SS SDFV
Subjt:  LKEKASF--NSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDFV

Query:  ASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANGG
        ASIV+NQELLIPIGLF GVLLT+LLKEISQE FGNSE                       +S FKKQLYGLGSFF+L KLI YG  IQ QTFPL VANGG
Subjt:  ASIVRNQELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANGG

Query:  LMQVLWLWRNFSRDRNQPNEQSPFVGQGTS
        LMQVLWLW+N SR+RN  NEQSP VGQGTS
Subjt:  LMQVLWLWRNFSRDRNQPNEQSPFVGQGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATCATTATACCATTGAAGGAGAAAGCATCTTTTAATAGCTGCTTGCTGCTGTATGGTAGTCGGCGAGCTACCCTTGCATCTTCAATGAAAGTAAAAATGGCACG
GTTTATGGATTCTAATTCCATGCCTGTAGAAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCGTACCTGAACCCGTTAAAAATTTTCCATGGAAAGAAGCAGAGAAGA
TACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACACTGAAGTGTTCTCTTCTTTTGTTCTTTGTTCTTAGCTCCTTTTCCGATTTTGTAGCATCCATAGTTAGAAAT
CAGGAGTTACTGATTCCTATTGGCCTCTTTATTGGTGTCTTGTTGACTGACCTTTTAAAAGAGATATCTCAAGAAGCGTTTGGCAACTCTGAGGTACATTTTGCTTCTGC
ATTTTTTACTTTATTCCATGCTACAAGTAATAAAACATCAACCATTCTACAGGAATCAATCTTCAAGAAACAACTTTATGGTCTCGGTTCCTTCTTCATTCTCGCGAAGC
TAATTGCTTATGGCTTCGCTATTCAAGCACAGACATTTCCTTTGCTTGTTGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAGAAATTTTTCAAGAGATAGAAAT
CAACCAAATGAACAGAGCCCATTCGTAGGTCAAGGTACGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATCATTATACCATTGAAGGAGAAAGCATCTTTTAATAGCTGCTTGCTGCTGTATGGTAGTCGGCGAGCTACCCTTGCATCTTCAATGAAAGTAAAAATGGCACG
GTTTATGGATTCTAATTCCATGCCTGTAGAAATTGAAAATTTGAAAGAGAAGATGCAAGAGGTCGTACCTGAACCCGTTAAAAATTTTCCATGGAAAGAAGCAGAGAAGA
TACTGGTGGAGAGACTGCTTTTTATGGGAAAGGAGACACTGAAGTGTTCTCTTCTTTTGTTCTTTGTTCTTAGCTCCTTTTCCGATTTTGTAGCATCCATAGTTAGAAAT
CAGGAGTTACTGATTCCTATTGGCCTCTTTATTGGTGTCTTGTTGACTGACCTTTTAAAAGAGATATCTCAAGAAGCGTTTGGCAACTCTGAGGTACATTTTGCTTCTGC
ATTTTTTACTTTATTCCATGCTACAAGTAATAAAACATCAACCATTCTACAGGAATCAATCTTCAAGAAACAACTTTATGGTCTCGGTTCCTTCTTCATTCTCGCGAAGC
TAATTGCTTATGGCTTCGCTATTCAAGCACAGACATTTCCTTTGCTTGTTGCAAATGGTGGGTTAATGCAAGTTTTGTGGCTGTGGAGAAATTTTTCAAGAGATAGAAAT
CAACCAAATGAACAGAGCCCATTCGTAGGTCAAGGTACGTCTTAA
Protein sequenceShow/hide protein sequence
MLIIIPLKEKASFNSCLLLYGSRRATLASSMKVKMARFMDSNSMPVEIENLKEKMQEVVPEPVKNFPWKEAEKILVERLLFMGKETLKCSLLLFFVLSSFSDFVASIVRN
QELLIPIGLFIGVLLTDLLKEISQEAFGNSEVHFASAFFTLFHATSNKTSTILQESIFKKQLYGLGSFFILAKLIAYGFAIQAQTFPLLVANGGLMQVLWLWRNFSRDRN
QPNEQSPFVGQGTS