; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding protein 1-like
Genome locationchr04:22334896..22335627
RNA-Seq ExpressionLsi04G014570
SyntenyLsi04G014570
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649895.1 hypothetical protein Csa_012205 [Cucumis sativus]2.6e-9777.64Show/hide
Query:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY
        +NMS  RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FG+ITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNY
Subjt:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY

Query:  NVGHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPS
        N  HIPNAR    KSPL   NRNVPFPYPYYGSGY IYPGFT FPHYG   VD YGSNFYGNWFPP   N+ASDG W+ PN F VGM PP  RNSL+ P 
Subjt:  NVGHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPS

Query:  YSSKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT
          SKGI   G+ NGMA  RNGEIKQNT+GKR MSADA PFQIKDRT
Subjt:  YSSKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT

XP_004141412.1 RNA-binding protein 1 [Cucumis sativus]1.7e-9677.87Show/hide
Query:  MSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNV
        MS  RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FG+ITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN 
Subjt:  MSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNV

Query:  GHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS
         HIPNAR    KSPL   NRNVPFPYPYYGSGY IYPGFT FPHYG   VD YGSNFYGNWFPP   N+ASDG W+ PN F VGM PP  RNSL+ P   
Subjt:  GHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS

Query:  SKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT
        SKGI   G+ NGMA  RNGEIKQNT+GKR MSADA PFQIKDRT
Subjt:  SKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT

XP_022940975.1 RNA-binding protein 1-like [Cucurbita moschata]4.5e-8169.57Show/hide
Query:  DQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQG
        DQ RGRKIFVGGLSAELTED+FKNYFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI       
Subjt:  DQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQG

Query:  GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSSKGISDTGTGNG
         KSPL   NV   YPYY  GYT+YPGFTPFP Y GPG  LYGS+ YGNWF PSFG MAS  AWYAPN F  GMFPPP++NSL+ P+YSS G+S    G  
Subjt:  GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSSKGISDTGTGNG

Query:  MAIRNGEIKQNTSGKRSMSADALPFQIKDR
         A    ++   T  +++MSADA+PF  KD+
Subjt:  MAIRNGEIKQNTSGKRSMSADALPFQIKDR

XP_022982410.1 RNA-binding protein 1-like [Cucurbita maxima]2.0e-8168.88Show/hide
Query:  MSN-IRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        MSN  RME   DQ RGRKIFVGGLSAELTED+FKNYFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
Subjt:  MSN-IRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  VGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSS
         GHI        KSPL   NV   YPYY  GYT+YPGFTPFP Y GPG  LYGS+ YGNWF PSFG MAS  AWY PN F  GMFPPP++NSL+ P+YSS
Subjt:  VGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSS

Query:  KGISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR
         G+S    G   A    +++  T  +++MSADA+PF  KDR
Subjt:  KGISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR

XP_038898856.1 RNA-binding protein 1-like [Benincasa hispida]9.7e-12489.07Show/hide
Query:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY
        M MS  RMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITF+SVESVDSVLQ+NFHELNGRRVEVKRAIPKKGNY
Subjt:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY

Query:  NVGHIPNARTQGGKSPLP--NRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPS
        N GHIPNARTQGGKSPLP  NRNVPFPYPYYGS Y +YPGFTPFPHYGGPGVDLYGS+ YGNWFPPSFGNMAS+G WY PN FGVG+FPPPYRNSLIPP 
Subjt:  NVGHIPNARTQGGKSPLP--NRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPS

Query:  YSSKGISDTGTGNGM--AIRNGEIKQNTSGKRSMSADALPFQIKDRT
        YSSKG+SDTGTGNGM    RNGEIKQNT+GKR MSADA+PFQIKDRT
Subjt:  YSSKGISDTGTGNGM--AIRNGEIKQNTSGKRSMSADALPFQIKDRT

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein8.3e-9777.87Show/hide
Query:  MSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNV
        MS  RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FG+ITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN 
Subjt:  MSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNV

Query:  GHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS
         HIPNAR    KSPL   NRNVPFPYPYYGSGY IYPGFT FPHYG   VD YGSNFYGNWFPP   N+ASDG W+ PN F VGM PP  RNSL+ P   
Subjt:  GHIPNARTQGGKSPL--PNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS

Query:  SKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT
        SKGI   G+ NGMA  RNGEIKQNT+GKR MSADA PFQIKDRT
Subjt:  SKGISDTGTGNGMA-IRNGEIKQNTSGKRSMSADALPFQIKDRT

A0A5N6R9D7 Uncharacterized protein5.5e-4849.53Show/hide
Query:  ENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNA
        +N ++Q R +KIFVGGLSA LTE+EFKNYF++FG++TDVVVMHDS T+RPRGFGFITFDS ESV++V+QN+FHELNGR VEVKRA+PK+ N       N 
Subjt:  ENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNA

Query:  RTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPS--------FGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS
        R +GG      R  P  +P Y   Y I PG+ PFP + G G  LYG++ Y  W+P             +A    WY P   G G FP P  ++ I P+Y 
Subjt:  RTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPS--------FGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYS

Query:  SKGISDTGTGNG
        + G+   G   G
Subjt:  SKGISDTGTGNG

A0A6J1C724 RNA-binding protein 1-like2.0e-6658.96Show/hide
Query:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY
        MN S+ RME+NNDQ RG+KIFVGGL ++LTE+EFK+YFEKFG+ITDVVVM DSVTNRPRGFGFITFDSVESV+ VLQNNFHELNGRRVEVKRA+PK  N 
Subjt:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY

Query:  NVGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNW-FPPSFGN------MASDGAWYAPNTFGVGMFPPPYRNS
        N     ++  Q GKSPL + +VP  YP++ SG  +YPG+ PFPHY       YGS+ YG+W +   +G       +    AWYAPN FG GMFP PY NS
Subjt:  NVGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNW-FPPSFGN------MASDGAWYAPNTFGVGMFPPPYRNS

Query:  LIPPSYSSKG--ISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR
        +I P YSSKG  + D   GNG   RNG          +MSADA+PFQ+ +R
Subjt:  LIPPSYSSKG--ISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR

A0A6J1FS87 RNA-binding protein 1-like2.2e-8169.57Show/hide
Query:  DQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQG
        DQ RGRKIFVGGLSAELTED+FKNYFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI       
Subjt:  DQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQG

Query:  GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSSKGISDTGTGNG
         KSPL   NV   YPYY  GYT+YPGFTPFP Y GPG  LYGS+ YGNWF PSFG MAS  AWYAPN F  GMFPPP++NSL+ P+YSS G+S    G  
Subjt:  GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSSKGISDTGTGNG

Query:  MAIRNGEIKQNTSGKRSMSADALPFQIKDR
         A    ++   T  +++MSADA+PF  KD+
Subjt:  MAIRNGEIKQNTSGKRSMSADALPFQIKDR

A0A6J1J2K5 RNA-binding protein 1-like9.9e-8268.88Show/hide
Query:  MSN-IRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        MSN  RME   DQ RGRKIFVGGLSAELTED+FKNYFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
Subjt:  MSN-IRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  VGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSS
         GHI        KSPL   NV   YPYY  GYT+YPGFTPFP Y GPG  LYGS+ YGNWF PSFG MAS  AWY PN F  GMFPPP++NSL+ P+YSS
Subjt:  VGHIPNARTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSS

Query:  KGISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR
         G+S    G   A    +++  T  +++MSADA+PF  KDR
Subjt:  KGISDTGTGNGMAIRNGEIKQNTSGKRSMSADALPFQIKDR

SwissProt top hitse value%identityAlignment
Q8W034 Heterogeneous nuclear ribonucleoprotein 17.4e-2634.75Show/hide
Query:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        N++  R    +   + +KIFVGGL   LT++EF+ YFE +G +TDV +M+D  TNRPRGFGF++FDS ++VDSVL   FH+L+G++VEVKRA+PK  N  
Subjt:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  VGHIPNARTQGGKSP----------------------LPNRNVPFPYPYYGS--------------GYTIYPGFT-PFPHYGGPGVDLYG-SNFYGNWFP
         G     R+ GG                         L +++V    P YGS              GY  Y G+T     YG      YG +N  G  + 
Subjt:  VGHIPNARTQGGKSP----------------------LPNRNVPFPYPYYGS--------------GYTIYPGFT-PFPHYGGPGVDLYG-SNFYGNWFP

Query:  PSFGNMASDGAWYAPNTFGVGMFPPPYRN----------SLIPPSYSSKGISDTGTGNG
         S G +A   +W  P + G G   P Y +             PP+ S  G S+ G G G
Subjt:  PSFGNMASDGAWYAPNTFGVGMFPPPYRN----------SLIPPSYSSKGISDTGTGNG

Q920Q6 RNA-binding protein Musashi homolog 21.8e-1941.55Show/hide
Query:  RGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQGGKS
        R +KIFVGGLSA    ++ K YFE+FGK+ D ++M D  TNR RGFGF+TF++ + V+ V + +FHE+N + VE K+A PK+  +  G      T+G   
Subjt:  RGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQGGKS

Query:  PLPNRNVPF-------PYPYYGSGY-TIYPGFTPFPHYGGPG
         LP     F        YP + + Y   YPGF P   Y  PG
Subjt:  PLPNRNVPF-------PYPYYGSGY-TIYPGFTPFPHYGGPG

Q96EP5 DAZ-associated protein 11.3e-1935.68Show/hide
Query:  NDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQ
        +D  +  KIFVGG+     E E + YF+KFG +T+VV+++D+   RPRGFGFITF+  +SVD  +  +FH++ G++VEVKRA P+         P A +Q
Subjt:  NDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNARTQ

Query:  GGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTF-------GVGMFPPP
         G   +PN           +G+   P  T    YG  G+ +      G + PP  G     GA   P  F         G FPPP
Subjt:  GGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTF-------GVGMFPPP

Q98SJ2 DAZ-associated protein 11.8e-1932.2Show/hide
Query:  ENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNA
        E   +  R  KIFVGG+     E E K YF +FG +T+VV+++D+   RPRGFGFITF+  +SVD  +  +FH++ G++VEVKRA P+         P +
Subjt:  ENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNA

Query:  RTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPP-----SFGNMASDGAWYAPNTFG-------VGMFPPPYRNSLIP
           G ++     N          G+T           G P     G +  G W P       +G  A  G    P +F         G FPPP      P
Subjt:  RTQGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPP-----SFGNMASDGAWYAPNTFG-------VGMFPPPYRNSLIP

Query:  PSYSS
        P Y++
Subjt:  PSYSS

Q9C652 RNA-binding protein 14.0e-3251.72Show/hide
Query:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG--
        MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRPRGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G  
Subjt:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG--

Query:  --NYNVGHIPNARTQGGKSP-LPNRN-----VPFPYPYYGSGYTI
          N N  +IP + +    +P +P +N     + FP P +G  + +
Subjt:  --NYNVGHIPNARTQGGKSP-LPNRN-----VPFPYPYYGSGYTI

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 12.9e-3351.72Show/hide
Query:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG--
        MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRPRGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G  
Subjt:  MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG--

Query:  --NYNVGHIPNARTQGGKSP-LPNRN-----VPFPYPYYGSGYTI
          N N  +IP + +    +P +P +N     + FP P +G  + +
Subjt:  --NYNVGHIPNARTQGGKSP-LPNRN-----VPFPYPYYGSGYTI

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-2947.47Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNART
        N    R +KIFVGGL + +TE EFKNYF++FG I DVVVM+D  T RPRGFGFITFDS ESVD VL   FHELNG+ VEVKRA+PK+ +           
Subjt:  NNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNART

Query:  QGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGN
            S  PNR+   P   YG+ Y + P  +              +N Y N FPP + N
Subjt:  QGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGN

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-2947.47Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNART
        N    R +KIFVGGL + +TE EFKNYF++FG I DVVVM+D  T RPRGFGFITFDS ESVD VL   FHELNG+ VEVKRA+PK+ +           
Subjt:  NNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNART

Query:  QGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGN
            S  PNR+   P   YG+ Y + P  +              +N Y N FPP + N
Subjt:  QGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGN

AT5G47620.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2841.55Show/hide
Query:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK----
        N SN  ++ +      +KIFVGGL++ +TE EFK YF +FG ITDVVVM+D  T RPRGFGFI++DS E+VD VLQ  FHELNG+ VEVK A+PK     
Subjt:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK----

Query:  -----------GNYNVGHIPNARTQG-GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWYAP
                   G   +  + N  TQG   SP+    V  P   Y        GF+PF H  G G++L   NF       YG+     FG   S G   + 
Subjt:  -----------GNYNVGHIPNARTQG-GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWYAP

Query:  NTFGVGM
          FG  M
Subjt:  NTFGVGM

AT5G47620.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-2841.55Show/hide
Query:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK----
        N SN  ++ +      +KIFVGGL++ +TE EFK YF +FG ITDVVVM+D  T RPRGFGFI++DS E+VD VLQ  FHELNG+ VEVK A+PK     
Subjt:  NMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK----

Query:  -----------GNYNVGHIPNARTQG-GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWYAP
                   G   +  + N  TQG   SP+    V  P   Y        GF+PF H  G G++L   NF       YG+     FG   S G   + 
Subjt:  -----------GNYNVGHIPNARTQG-GKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWYAP

Query:  NTFGVGM
          FG  M
Subjt:  NTFGVGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGAGTAATATTAGGATGGAAAACAACAACGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGTGGCTTATCGGCTGAATTGACTGAGGATGAGTTTAAAAATTA
CTTTGAAAAGTTTGGTAAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATTCTGTAGAATCTGTTGACT
CTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGTTGGTCATATTCCCAATGCTAGAACA
CAGGGAGGAAAAAGCCCTCTTCCTAATAGGAATGTTCCTTTCCCTTACCCGTATTATGGTTCTGGTTATACAATTTATCCTGGTTTTACACCTTTTCCTCATTATGGAGG
ACCTGGAGTTGATTTGTATGGTTCAAACTTTTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCGGACGGCGCATGGTATGCCCCAAATACTTTTGGTGTTG
GGATGTTTCCTCCACCTTATAGAAATTCTCTGATCCCTCCATCATACTCAAGCAAGGGGATCTCAGATACAGGGACTGGAAATGGAATGGCAATAAGAAACGGGGAGATA
AAGCAGAACACTTCTGGAAAACGAAGTATGTCAGCTGATGCACTGCCATTTCAGATCAAAGACAGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATGAGTAATATTAGGATGGAAAACAACAACGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGTGGCTTATCGGCTGAATTGACTGAGGATGAGTTTAAAAATTA
CTTTGAAAAGTTTGGTAAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATTCTGTAGAATCTGTTGACT
CTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGTTGGTCATATTCCCAATGCTAGAACA
CAGGGAGGAAAAAGCCCTCTTCCTAATAGGAATGTTCCTTTCCCTTACCCGTATTATGGTTCTGGTTATACAATTTATCCTGGTTTTACACCTTTTCCTCATTATGGAGG
ACCTGGAGTTGATTTGTATGGTTCAAACTTTTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCGGACGGCGCATGGTATGCCCCAAATACTTTTGGTGTTG
GGATGTTTCCTCCACCTTATAGAAATTCTCTGATCCCTCCATCATACTCAAGCAAGGGGATCTCAGATACAGGGACTGGAAATGGAATGGCAATAAGAAACGGGGAGATA
AAGCAGAACACTTCTGGAAAACGAAGTATGTCAGCTGATGCACTGCCATTTCAGATCAAAGACAGAACTTGA
Protein sequenceShow/hide protein sequence
MNMSNIRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNVGHIPNART
QGGKSPLPNRNVPFPYPYYGSGYTIYPGFTPFPHYGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYAPNTFGVGMFPPPYRNSLIPPSYSSKGISDTGTGNGMAIRNGEI
KQNTSGKRSMSADALPFQIKDRT