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Lsi04G014580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:22336446..22341533
RNA-Seq ExpressionLsi04G014580
SyntenyLsi04G014580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]4.2e-5883.33Show/hide
Query:  NVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKSDDSKEKDP
        NV FSWEAKPGVPKPQSQPSP ASLFE SMLKLPSPPCRSESARLSGDYS +I YSPPRCRAESARMAKD+LWLEAYSDGSASSFGF CCKSDDSK+ DP
Subjt:  NVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKSDDSKEKDP

Query:  FAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL
        F EAYKKCTN  S+S R I+GGSAT+GVKRP++I + L
Subjt:  FAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL

KAF9834216.1 hypothetical protein H0E87_030917 [Populus deltoides]5.3e-0533.33Show/hide
Query:  LQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKL---PSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKS
        +Q++ NV FSWE KPGV K   Q      ++    LKL   P PPC S+S +   DYS  +P +P                        +SSF     K 
Subjt:  LQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKL---PSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKS

Query:  DDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINK
            ++DPF  AYKKCT  P I+ +  S G    G  RP ++ K
Subjt:  DDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINK

KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]7.8e-4966.25Show/hide
Query:  TSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSAS
        +SSHP++ D E LQT TNV FSWEAKPGVPK QS  SP  S FE S LKLPSPP RSESARL  DY   IP S P  RA+SARMAK++LWL+AYSD   S
Subjt:  TSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSAS

Query:  SFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGI
        SFGF CCK D  KE DPF EAYKKCTNGPS + RPI GGSAT+GVKRP +  +R ++F +
Subjt:  SFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGI

KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4866.25Show/hide
Query:  TSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSAS
        +SSHP++ D E LQT TNV FSWEAKPGVPK QS  SP  S FE S LKLPSPP RSESARL  DY   IP S P  RA+SARMAK++LWL+AYSD   S
Subjt:  TSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSAS

Query:  SFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGI
        SFGF CCK D  KE DPF EAYKKCTNGPS + RPI GGSAT+GVKRP +  +R ++F +
Subjt:  SFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGI

XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]2.9e-5975.3Show/hide
Query:  MTSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLF--EGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDG
        M SS PIEID EFL T+TNV FSWEAKPGVPKPQSQPSP ASLF  E +MLKLPSPPCRSESARLSGDYS +I YSPPRCRAESARMAKD+LWLEAYSDG
Subjt:  MTSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLF--EGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDG

Query:  SASSFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGILVF
        SASSFGF CCKSDDSK+ DPF EAYKKC N      R I+G SAT+G KRP++I  R V+F +  F
Subjt:  SASSFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGILVF

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ9 Uncharacterized protein8.2e-6077.22Show/hide
Query:  MTSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLF--EGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDG
        M SS PIEID EFL T+TNV FSWEAKPGVPKPQSQPSP ASLF  E +MLKLPSPPCRSESARLSGDYS +I YSPPRCRAESARMAKD+LWLEAYSDG
Subjt:  MTSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLF--EGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDG

Query:  SASSFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL
        SASSFGF CCKSDDSK+ DPF EAYKKC N      R I+G SAT+G KRP++I + L
Subjt:  SASSFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL

A0A2K1XNQ3 Uncharacterized protein1.7e-0432.41Show/hide
Query:  LQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKL----PSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCK
        +Q++ NV FSWE KPGV K   Q      ++    LKL    P PPC S+S +   DYS  +P +P                        +SSF     K
Subjt:  LQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKL----PSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCK

Query:  SDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINK
             ++DPF  AYKKC   P I+ +  S G    G  RP ++ K
Subjt:  SDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINK

A0A5D3D9E3 Uncharacterized protein2.0e-5883.33Show/hide
Query:  NVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKSDDSKEKDP
        NV FSWEAKPGVPKPQSQPSP ASLFE SMLKLPSPPCRSESARLSGDYS +I YSPPRCRAESARMAKD+LWLEAYSDGSASSFGF CCKSDDSK+ DP
Subjt:  NVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWLEAYSDGSASSFGFRCCKSDDSKEKDP

Query:  FAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL
        F EAYKKCTN  S+S R I+GGSAT+GVKRP++I + L
Subjt:  FAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACAAATCGAGCAGACCGAAAGACACTTACCCTGATTTTACAATCGTCATGACGAGTTCTCATCCAATCGAGATTGATTCCGAATTCCTTCAAACGGAGACGAA
CGTATCGTTCTCTTGGGAGGCCAAGCCCGGCGTTCCGAAACCGCAATCGCAACCAAGTCCTAGGGCAAGCTTGTTCGAGGGATCGATGTTGAAATTGCCTTCGCCACCGT
GCCGCTCGGAGAGTGCTAGGCTTTCCGGTGACTACAGTGCGGTGATCCCCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGGATGGCGAAAGATTATTTGTGGCTT
GAAGCTTATTCCGACGGCTCTGCATCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAAGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAAACGG
CCCGTCGATAAGCCTTCGGCCGATTAGTGGTGGTTCTGCCACAAGTGGTGTTAAACGCCCTAGTGTCATAAATAAGAGATTGGTCGTGTTCGGAATTTTAGTATTCGATG
TTCCAAATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACAAATCGAGCAGACCGAAAGACACTTACCCTGATTTTACAATCGTCATGACGAGTTCTCATCCAATCGAGATTGATTCCGAATTCCTTCAAACGGAGACGAA
CGTATCGTTCTCTTGGGAGGCCAAGCCCGGCGTTCCGAAACCGCAATCGCAACCAAGTCCTAGGGCAAGCTTGTTCGAGGGATCGATGTTGAAATTGCCTTCGCCACCGT
GCCGCTCGGAGAGTGCTAGGCTTTCCGGTGACTACAGTGCGGTGATCCCCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGGATGGCGAAAGATTATTTGTGGCTT
GAAGCTTATTCCGACGGCTCTGCATCGTCTTTCGGTTTCAGGTGCTGTAAATCGGATGATTCGAAGGAGAAGGATCCTTTTGCTGAAGCCTACAAGAAATGTACAAACGG
CCCGTCGATAAGCCTTCGGCCGATTAGTGGTGGTTCTGCCACAAGTGGTGTTAAACGCCCTAGTGTCATAAATAAGAGATTGGTCGTGTTCGGAATTTTAGTATTCGATG
TTCCAAATATATAA
Protein sequenceShow/hide protein sequence
MRNKSSRPKDTYPDFTIVMTSSHPIEIDSEFLQTETNVSFSWEAKPGVPKPQSQPSPRASLFEGSMLKLPSPPCRSESARLSGDYSAVIPYSPPRCRAESARMAKDYLWL
EAYSDGSASSFGFRCCKSDDSKEKDPFAEAYKKCTNGPSISLRPISGGSATSGVKRPSVINKRLVVFGILVFDVPNI