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Lsi04G014590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:22342502..22342894
RNA-Seq ExpressionLsi04G014590
SyntenyLsi04G014590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064468.1 hypothetical protein E6C27_scaffold255G001830 [Cucumis melo var. makuwa]9.3e-5782.71Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRD--DEDLLKKQLRPPPCTPARKGNIK-LKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGG
        MACNN+THSRGRVAFSWEN+PGVCKAAVAPP+ F D  D+D LKK+L+PPPCTPARKGN K L+KDGG EDPFLAAYRECT+ DDEK+CKLKKNK GFGG
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRD--DEDLLKKQLRPPPCTPARKGNIK-LKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGG

Query:  WITINLFGNLSCKHLTAVRDDSLISSPVSKRTV
        W+T+N FGNLSCK LTAVRDDSLISSPVSKRTV
Subjt:  WITINLFGNLSCKHLTAVRDDSLISSPVSKRTV

KAE8649893.1 hypothetical protein Csa_012691 [Cucumis sativus]1.1e-3682.95Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKL
        MACNN+THSRGRVAFSWENKPGVCKAAVAPPH F D +D LKKQL+PPPCTPARKGN KL+KDGG EDPFLAAY+ECT+ DDEK+C L
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKL

KAG6591440.1 Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3372.63Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGF
        M C+NR HSRGRVAFSWENKPG CKAAVAPP     D+DL +K+LRPPPCT ARKG  K++KDG  EDPFLAA+REC+NG+DEK+CKLK+NK+GF
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGF

KAG7024319.1 hypothetical protein SDJN02_13133, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3372.63Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGF
        M C+NR HSRGRVAFSWENKPG CKAAVAPP     D+DL +K+LRPPPCT ARKG  K++KDG  EDPFLAA+REC+NG+DEK+CKLK+NK+GF
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGF

XP_042510064.1 uncharacterized protein LOC122085636 [Macadamia integrifolia]7.7e-1136.69Show/hide
Query:  RTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGV-----------------------EDPFLAAYRECTNGDD
        R HS+G+V FSWENKPG+ K  +   H F  +      +L PPPC P+    + L +D  +                       EDPFLAAY+ECT    
Subjt:  RTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGV-----------------------EDPFLAAYRECTNGDD

Query:  EKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI
         KS   K++  G G  +T+ +F   SCKH   VRDD L+
Subjt:  EKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI

TrEMBL top hitse value%identityAlignment
A0A0A0L2M9 Uncharacterized protein4.8e-5984.62Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGGWIT
        MACNN+THSRGRVAFSWENKPGVCKAAVAPPH F D +D LKKQL+PPPCTPARKGN KL+KDGG EDPFLAAY+ECT+ DDEK+CKLKKNKSGFGGW+T
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGGWIT

Query:  INLFGNLSCKHLTAVRDDSLISSPVSKRTV
         N F NLSCK LTAVRDDSLISSP SKRTV
Subjt:  INLFGNLSCKHLTAVRDDSLISSPVSKRTV

A0A1R3HKK6 Uncharacterized protein4.9e-1136.3Show/hide
Query:  RTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTP------------------------------ARKGNIKLKKDGGVEDPFLAAYR
        + HS+G V FSWENKPGVCK  +    C +  ED   ++L PPPC P                              +R+G   LKK    +DPFLAAY+
Subjt:  RTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTP------------------------------ARKGNIKLKKDGGVEDPFLAAYR

Query:  ECTNGDDEKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI
        ECT   ++   KL KN +G G         + SCK   +VRDD+L+
Subjt:  ECTNGDDEKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI

A0A5A7VA56 Uncharacterized protein4.5e-5782.71Show/hide
Query:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRD--DEDLLKKQLRPPPCTPARKGNIK-LKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGG
        MACNN+THSRGRVAFSWEN+PGVCKAAVAPP+ F D  D+D LKK+L+PPPCTPARKGN K L+KDGG EDPFLAAYRECT+ DDEK+CKLKKNK GFGG
Subjt:  MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRD--DEDLLKKQLRPPPCTPARKGNIK-LKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGG

Query:  WITINLFGNLSCKHLTAVRDDSLISSPVSKRTV
        W+T+N FGNLSCK LTAVRDDSLISSPVSKRTV
Subjt:  WITINLFGNLSCKHLTAVRDDSLISSPVSKRTV

A0A5B7BYG1 Uncharacterized protein5.8e-1236.88Show/hide
Query:  NNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPC----------------------TPARKGNIK-LKKDGGVEDPFLAAYRECTNG
        NN+ HS+G V FSWENKPGV K      H    DE   K +L PPPC                       P+R  + + L+K+   +DPFL AY+ECT  
Subjt:  NNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPC----------------------TPARKGNIK-LKKDGGVEDPFLAAYRECTNG

Query:  DDEKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI
          +     KK+  GFG    +++F   SCK   +VRDD++I
Subjt:  DDEKSCKLKKNKSGFGGWITINLFGNLSCKHLTAVRDDSLI

E0CNY8 Uncharacterized protein3.7e-1137.76Show/hide
Query:  NRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKL--------------------KKDGGV---EDPFLAAYRECTNGD
        ++ HS+G V F+WENKPGVCKA      C  D    + K L+PPPC P  KG   +                     K G +   EDPFLAAY+ECT   
Subjt:  NRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKL--------------------KKDGGV---EDPFLAAYRECTNGD

Query:  DEKSCKLKKNKSGFGGWITI--NLFGNLSCKHLTAVRDDSLIS
               K  + G  G   +  +   NLSCKH   VRDD+L+S
Subjt:  DEKSCKLKKNKSGFGGWITI--NLFGNLSCKHLTAVRDDSLIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCAACAACAGAACCCATTCAAGAGGCAGAGTGGCTTTCTCATGGGAGAATAAACCAGGGGTGTGCAAGGCAGCGGTGGCGCCGCCGCACTGCTTCCGTGACGA
TGAAGATCTGTTGAAGAAGCAGCTGCGGCCGCCGCCGTGTACTCCGGCGAGAAAGGGCAACATAAAGCTGAAGAAAGATGGGGGCGTTGAAGACCCTTTTCTTGCGGCGT
ACAGAGAGTGCACGAATGGAGATGATGAGAAGAGTTGTAAGTTGAAGAAGAATAAATCTGGGTTTGGAGGGTGGATAACGATTAACTTGTTTGGTAATTTATCTTGCAAG
CACTTGACGGCGGTTCGAGATGATAGTTTGATTAGTTCCCCTGTTTCCAAACGAACCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCAACAACAGAACCCATTCAAGAGGCAGAGTGGCTTTCTCATGGGAGAATAAACCAGGGGTGTGCAAGGCAGCGGTGGCGCCGCCGCACTGCTTCCGTGACGA
TGAAGATCTGTTGAAGAAGCAGCTGCGGCCGCCGCCGTGTACTCCGGCGAGAAAGGGCAACATAAAGCTGAAGAAAGATGGGGGCGTTGAAGACCCTTTTCTTGCGGCGT
ACAGAGAGTGCACGAATGGAGATGATGAGAAGAGTTGTAAGTTGAAGAAGAATAAATCTGGGTTTGGAGGGTGGATAACGATTAACTTGTTTGGTAATTTATCTTGCAAG
CACTTGACGGCGGTTCGAGATGATAGTTTGATTAGTTCCCCTGTTTCCAAACGAACCGTGTAA
Protein sequenceShow/hide protein sequence
MACNNRTHSRGRVAFSWENKPGVCKAAVAPPHCFRDDEDLLKKQLRPPPCTPARKGNIKLKKDGGVEDPFLAAYRECTNGDDEKSCKLKKNKSGFGGWITINLFGNLSCK
HLTAVRDDSLISSPVSKRTV