; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic
Genome locationchr04:22513150..22514145
RNA-Seq ExpressionLsi04G014800
SyntenyLsi04G014800
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATI24797.1 NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis]6.9e-3250.29Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGV                     
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------

Query:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
                                    RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT +LDVDAT
Subjt:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

ATI24814.1 NADH-plastoquinone oxidoreductase subunit 2 [Plukenetia volubilis]5.3e-3250.88Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGV                     
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------

Query:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
                                    RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT ILDVDAT
Subjt:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

KAF1855485.1 hypothetical protein Lal_00044209 [Lupinus albus]3.0e-3589.16Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNT
        +IVNG +NTQM +SPGISIA +FIT+GIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHF+SSLLRVVPTKDRTNDVYNT
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNT

KAF1866111.1 hypothetical protein Lal_00043064 [Lupinus albus]1.6e-3379.12Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
        +IVNG +NTQM +SPGISIA  FIT+GIGFKLSP PSHQWTP +YEGVR +NN+SLYDK IHF+SSLL VVPTKDRTNDVYNT ILD DAT
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

KAG5383810.1 hypothetical protein IGI04_035280 [Brassica rapa subsp. trilocularis]4.0e-3287.65Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVY
        +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEGVRVRNNESLYDK+IHFAS LLRVVPTKDRTNDVY
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVY

TrEMBL top hitse value%identityAlignment
A0A0D3CHF2 Uncharacterized protein2.0e-3287.65Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVY
        +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEGVRVRNNESLYDK+IHFAS LLRVVPTKDRTNDVY
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVY

A0A291LRH6 NADH-plastoquinone oxidoreductase subunit 22.6e-3250.88Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGV                     
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------

Query:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
                                    RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT ILDVDAT
Subjt:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

A0A291LRP4 NADH-plastoquinone oxidoreductase subunit 23.3e-3250.29Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGV                     
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGV---------------------

Query:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
                                    RVRNNESLYDKQIHFASSLLRV PTKDRTNDVYNT +LDVDAT
Subjt:  ----------------------------RVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

A0A6A5L7K0 Proton_antipo_M domain-containing protein1.4e-3589.16Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNT
        +IVNG +NTQM +SPGISIA +FIT+GIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHF+SSLLRVVPTKDRTNDVYNT
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNT

A0A6A5LV56 Proton_antipo_M domain-containing protein8.0e-3479.12Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT
        +IVNG +NTQM +SPGISIA  FIT+GIGFKLSP PSHQWTP +YEGVR +NN+SLYDK IHF+SSLL VVPTKDRTNDVYNT ILD DAT
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNNESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT

SwissProt top hitse value%identityAlignment
P0CC48 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic4.5e-1885.71Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR
        +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGVR
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR

P0CC49 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic4.5e-1885.71Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR
        +IVNG +NTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEGVR
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVR

P0CC50 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.9e-1787.23Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        +IVNG LNTQM +SPGISIA +FITVGIGFKLSPAPSHQWTPDVYEG
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

P0CC78 NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic2.2e-1758.97Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA LFITVGIGFKLSPAPSHQWTPDVYEG
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

P0CC79 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic2.2e-1758.97Show/hide
Query:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        +L + +SW + S            G +    +IVNG +NTQM +SPGISIA LFITVGIGFKLSPAPSHQWTPDVYEG
Subjt:  LLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

Arabidopsis top hitse value%identityAlignment
ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein5.1e-1782.98Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEG
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein5.1e-1782.98Show/hide
Query:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        +IVNG +NTQM +SPGISIA +FITVGIGFKLS APSHQWTPDVYEG
Subjt:  KIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

ATMG00285.1 NADH dehydrogenase 2A6.5e-0447.22Show/hide
Query:  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        + S GI +  L I VG  FK++  P H W PD+YEG
Subjt:  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG

ATMG01320.1 NADH dehydrogenase 2B6.5e-0447.22Show/hide
Query:  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG
        + S GI +  L I VG  FK++  P H W PD+YEG
Subjt:  SHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGTTCTTCTA
TTCTGGTGAATGCTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCGACGAAAATAGTAAATGGTCCTCTCAATACACAAATGTCTCACTCCCCAGGAA
TTTCAATTGCGCAACTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGGTCAGGAACAAC
GAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTGGAATTCTCGATGTAGATGC
TACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGTTCTTCTA
TTCTGGTGAATGCTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCGACGAAAATAGTAAATGGTCCTCTCAATACACAAATGTCTCACTCCCCAGGAA
TTTCAATTGCGCAACTATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCCCAGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGGTCAGGAACAAC
GAATCTCTTTATGATAAACAGATTCATTTTGCAAGTTCGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAATACTGGAATTCTCGATGTAGATGC
TACATAG
Protein sequenceShow/hide protein sequence
MELQNVSVYAPTYYLDIPRKMYGLMRLLRNIYSWFFYSGECFLLAIWFIRGRDRASTKIVNGPLNTQMSHSPGISIAQLFITVGIGFKLSPAPSHQWTPDVYEGVRVRNN
ESLYDKQIHFASSLLRVVPTKDRTNDVYNTGILDVDAT