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Lsi04G014810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationchr04:22514551..22514880
RNA-Seq ExpressionLsi04G014810
SyntenyLsi04G014810
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR005717 - Ribosomal protein S7, bacterial/organellar-type
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QUV73719.1 ribosomal protein S7 [Rohdea wattii]6.6e-4893.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

YP_009004087.1 ribosomal protein S7 [Cucumis hystrix]2.3e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

YP_009318927.1 ribosomal protein S7 [Eriocnema fulva]2.3e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

YP_009556545.1 ribosomal protein S7 [Rhabdodendron amazonicum]5.1e-4893.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

YP_009767874.1 ribosomal protein S7 [Dermatophyllum secundiflorum]2.3e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

TrEMBL top hitse value%identityAlignment
A0A0A0L6M3 30S ribosomal protein S7, chloroplastic1.1e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

A0A1I9VUZ4 30S ribosomal protein S7, chloroplastic1.1e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

A0A218KG96 30S ribosomal protein S7, chloroplastic1.1e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

A0A343UM92 30S ribosomal protein S7, chloroplastic1.1e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

A0A6H0E3D0 Ribosomal protein S71.1e-4894.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

SwissProt top hitse value%identityAlignment
Q49KT8 30S ribosomal protein S7, chloroplastic1.5e-5093.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

Q4VZK9 30S ribosomal protein S7, chloroplastic3.0e-5194.5Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKF SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

Q67ID1 30S ribosomal protein S7, chloroplastic1.5e-5093.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        +KKM+QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

Q6EM99 30S ribosomal protein S7, chloroplastic1.5e-5093.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

Q9B1A1 30S ribosomal protein S7, chloroplastic1.5e-5093.58Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        MKK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein7.6e-1033.96Show/hide
Query:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--ELVDAVKGSGDAIRKKEETHRMAEANR
        +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ ++R    ++ + CS  E++DA +  G A RK+E  H +A  NR
Subjt:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--ELVDAVKGSGDAIRKKEETHRMAEANR

Query:  AFAHFR
        +FAHFR
Subjt:  AFAHFR

ATCG00900.1 Ribosomal protein S7p/S5e family protein2.3e-5192.66Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

ATCG01240.1 ribosomal protein S72.3e-5192.66Show/hide
Query:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE
        +KK++QKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFK  SELVDA KGSGDAIRKKEETHRMAE
Subjt:  MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAE

Query:  ANRAFAHFR
        ANRAFAHFR
Subjt:  ANRAFAHFR

ATMG01270.1 mitochondrial ribosomal protein S77.6e-1033.96Show/hide
Query:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--ELVDAVKGSGDAIRKKEETHRMAEANR
        +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ ++R    ++ + CS  E++DA +  G A RK+E  H +A  NR
Subjt:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGAS-RKRPGRNMAFKFCS--ELVDAVKGSGDAIRKKEETHRMAEANR

Query:  AFAHFR
        +FAHFR
Subjt:  AFAHFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGATGAAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATC
AACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAAT
TCTGTTCCGAATTAGTGGATGCTGTCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGATGAAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGGCGGATC
AACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAAT
TCTGTTCCGAATTAGTGGATGCTGTCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA
Protein sequenceShow/hide protein sequence
MKKMKQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKFCSELVDAVKGSGDAIRKKEETHRMAEANRAFAHFR