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Lsi04G014960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationchr04:22656430..22658291
RNA-Seq ExpressionLsi04G014960
SyntenyLsi04G014960
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452636.1 PREDICTED: uncharacterized protein LOC103493595 [Cucumis melo]1.5e-4977.21Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWVLF VLQTTLLLLFFP Y+ ASSSS               D++LN HHVN  KCLSD+PLNRKLKFQTDEH +LGRKKVHPGDLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEH  PLLPHMPNPPPP+QPG Y
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
XP_011654147.1 uncharacterized protein LOC105435309 [Cucumis sativus]1.7e-4877.21Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWV F VLQTTLLL FFPSY+ ASSSS               D++LNHHHVN NKCLSDI LNRKLKFQTDEH + GRKKVHP DLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMPNPPPP QPG Y
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
XP_022937047.1 uncharacterized protein LOC111443464 [Cucurbita moschata]3.5e-4674.26Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSG WV FLVLQTTLLL  FPSY+ ASS+S               DM+L+HHHV+PN+CLSDIP NRKLKFQTD+H SLG+KKVHPGDL LDDY  ID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMP PPPPDQPGDY
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
XP_022977124.1 uncharacterized protein LOC111477287 [Cucurbita maxima]2.0e-4674.26Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWV FLVLQTTLLL  FPS++ ASS+S               DM+L+HHHVNPN+CLSD+P NRKLKFQTDEH SLG+K VHPGDL LDDY  ID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMP PPPPDQPGDY
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
XP_038899330.1 uncharacterized protein LOC120086661 [Benincasa hispida]1.3e-5381.62Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWVLF VLQTTLL+LFFPSY+ ASSSS               D++LN+HHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMPN PPP QPGDY
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
TrEMBL top hitse value%identityAlignment
A0A0A0L2J3 Uncharacterized protein8.1e-4977.21Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWV F VLQTTLLL FFPSY+ ASSSS               D++LNHHHVN NKCLSDI LNRKLKFQTDEH + GRKKVHP DLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMPNPPPP QPG Y
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
A0A1S3BV38 uncharacterized protein LOC1034935957.3e-5077.21Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWVLF VLQTTLLLLFFP Y+ ASSSS               D++LN HHVN  KCLSD+PLNRKLKFQTDEH +LGRKKVHPGDLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEH  PLLPHMPNPPPP+QPG Y
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
A0A6J1DLK4 uncharacterized protein LOC111021399 isoform X11.3e-4371.74Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWVLF +LQ +LLLLFFPSY+ AS SSV             ADM+LNH H+ PN+  S IPLNRKLKFQ DE+ S  R KVH GDLNLDDYHPID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPD--QPGDY
        PVPSSKTSVKPGPIEHGTPLLPH+PNPPPPD  QPGD+
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPD--QPGDY
A0A6J1FA15 uncharacterized protein LOC1114434641.7e-4674.26Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSG WV FLVLQTTLLL  FPSY+ ASS+S               DM+L+HHHV+PN+CLSDIP NRKLKFQTD+H SLG+KKVHPGDL LDDY  ID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMP PPPPDQPGDY
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
A0A6J1IQK4 uncharacterized protein LOC1114772879.9e-4774.26Show/hide
Query:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID
        MKLSGFWV FLVLQTTLLL  FPS++ ASS+S               DM+L+HHHVNPN+CLSD+P NRKLKFQTDEH SLG+K VHPGDL LDDY  ID
Subjt:  MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPID

Query:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
        PVPSSKTSVKPGPIEHG PLLPHMP PPPPDQPGDY
Subjt:  PVPSSKTSVKPGPIEHGTPLLPHMPNPPPPDQPGDY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein2.4e-0860.98Show/hide
Query:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPP
        + L+DY+ P+DP P++K S+KPGPIEHGTPL P++P PP P
Subjt:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGTPLLPHMPNPPPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTGGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCAGCTATGTAATTGCCTCCTCCAGCTCCGTTTTGCACGTTGA
TTTTGGTGTGCTTTTCTTGACTGCAATCGCAGATATGTCTCTGAACCACCACCATGTTAATCCAAACAAATGCTTGTCTGACATACCATTGAACAGGAAGCTGAAGTTCC
AGACTGATGAACATTATAGCCTGGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAGACATCAGTCAAA
CCCGGTCCAATAGAGCACGGCACTCCTCTCCTGCCTCATATGCCAAATCCTCCACCTCCTGATCAGCCAGGCGATTACCCTTAG
mRNA sequenceShow/hide mRNA sequence
CAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCCTTCTCTGATCCAATTAAATGCTA
TGCCATATTTCCACTGTTGTTTTAAAGCCCCCATGGACGAGCACCTTTGAAGCGCTTCTCCTCCCTAAGACTCCTTGGAAGTGGAAGAGGGTTTGTGTTTTTTTGTTTCT
TTTTCTGGGTACATTCTCGTTTTGGAGTTGTTCGATTTTTTTCTGGGTCTGGTCCGCATTGTTTTTGGGGGGCATTTCGACATTATTTCATTATGAAGCTTTCTGGGTTT
TGGGTTTTGTTTTTGGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCAGCTATGTAATTGCCTCCTCCAGCTCCGTTTTGCACGTTGATTTTGGTGTGCTTTTCTT
GACTGCAATCGCAGATATGTCTCTGAACCACCACCATGTTAATCCAAACAAATGCTTGTCTGACATACCATTGAACAGGAAGCTGAAGTTCCAGACTGATGAACATTATA
GCCTGGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGTCCAATAGAGCAC
GGCACTCCTCTCCTGCCTCATATGCCAAATCCTCCACCTCCTGATCAGCCAGGCGATTACCCTTAGAGAGCACAAACATTTATCTTCTCTAGTTATAGTTGTCTTAAATA
ATCCAAGTTTGTTTCTCATGGAACCAAACCAACCACGTTATCCTGTCTCTTATATTTTCTGTAAGAAGTTGACTTGAGTGTTGTCATTCCTATTATGCATCCTTTAAATG
ATATATCTTCTGTTATCTACAGAAACAAGACCATGTTAGAATGATATACTAAGAGAACCAATGCATTTGATGATATGTCCAACACCTGCTTCACAATTTAGTTTCAGAAA
ATTTGAGGCATTTATTATGTGTTTTTGTCTTTTATATAGTTAGAGCCTGATCAATTTGTCCCATGTCCTTTCTGTTGAAATATCTATAGAAAGCAAAAGAGCTGAAGGGC
TGTGGTAATCAACCAGAGCACCAACTCCATTGAAATAGACAGAAGATCAAAGGGGATTATTTTCTTCTTCCTTAAGCTAAATATTCTAACCACCAATCAACATCTAAACC
AGTGCTCTCTCCTTCCACT
Protein sequenceShow/hide protein sequence
MKLSGFWVLFLVLQTTLLLLFFPSYVIASSSSVLHVDFGVLFLTAIADMSLNHHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSKTSVK
PGPIEHGTPLLPHMPNPPPPDQPGDYP