; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G014970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationchr04:22660080..22662389
RNA-Seq ExpressionLsi04G014970
SyntenyLsi04G014970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452634.1 PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo]1.2e-4585.22Show/hide
Query:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM
        PFLLHTSLLLLFF S  NAS TS MA N+LH ESNE LFA PSNRK+K+QD E  NPTRKNVRVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHM
Subjt:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM

Query:  PNPSPPDQPQPGGFV
        PNPSPPDQPQPGGFV
Subjt:  PNPSPPDQPQPGGFV

XP_011654146.1 uncharacterized protein LOC105435308 [Cucumis sativus]1.1e-4686.09Show/hide
Query:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM
        PFLLH SLLLLFF S  NAS TS MAPNHLH ESNE LFA PSNRK+K+QD E SNPTRKNVRVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHM
Subjt:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM

Query:  PNPSPPDQPQPGGFV
        P+PSPPDQPQPGGFV
Subjt:  PNPSPPDQPQPGGFV

XP_022941446.1 uncharacterized protein LOC111446740 isoform X2 [Cucurbita moschata]6.2e-4275.81Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VM F+LHTSLLLLFF+S+I +S +S M PN  H  SNECL A PSNRKLK++D + S+P RKNVRV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQPGGFV
        H SPLIP+MPNPSPPDQPQPGGFV
Subjt:  HGSPLIPHMPNPSPPDQPQPGGFV

XP_023525817.1 uncharacterized protein LOC111789323 isoform X2 [Cucurbita pepo subsp. pepo]2.8e-4276.61Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VM F+LHTSLLLLFF+S+I +S +S M PN  H  SNECL A PSNRKLK+QD + S+P RKNVRV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQPGGFV
        H SPLIP+MPNPSPPDQPQPGGFV
Subjt:  HGSPLIPHMPNPSPPDQPQPGGFV

XP_038897195.1 uncharacterized protein LOC120085331 [Benincasa hispida]3.1e-4983.87Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MKSFRFPVMPFLL T   LL F+S  NASLTS M PNHLH ESN+CLFA PSNRK+K+QD  HSNPTR NVRVGN+NLYDYSPIDPVP+SKRSIKHGPIE
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQPGGFV
        HGSPLIPHMPNPSPPDQPQPGGFV
Subjt:  HGSPLIPHMPNPSPPDQPQPGGFV

TrEMBL top hitse value%identityAlignment
A0A0A0L0G3 Uncharacterized protein5.3e-4786.09Show/hide
Query:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM
        PFLLH SLLLLFF S  NAS TS MAPNHLH ESNE LFA PSNRK+K+QD E SNPTRKNVRVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHM
Subjt:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM

Query:  PNPSPPDQPQPGGFV
        P+PSPPDQPQPGGFV
Subjt:  PNPSPPDQPQPGGFV

A0A1S3BUB3 uncharacterized protein LOC103493594 isoform X15.8e-4685.22Show/hide
Query:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM
        PFLLHTSLLLLFF S  NAS TS MA N+LH ESNE LFA PSNRK+K+QD E  NPTRKNVRVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHM
Subjt:  PFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHM

Query:  PNPSPPDQPQPGGFV
        PNPSPPDQPQPGGFV
Subjt:  PNPSPPDQPQPGGFV

A0A6J1FL48 uncharacterized protein LOC111446740 isoform X23.0e-4275.81Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VM F+LHTSLLLLFF+S+I +S +S M PN  H  SNECL A PSNRKLK++D + S+P RKNVRV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQPGGFV
        H SPLIP+MPNPSPPDQPQPGGFV
Subjt:  HGSPLIPHMPNPSPPDQPQPGGFV

A0A6J1FTP5 uncharacterized protein LOC111446740 isoform X12.1e-4072.87Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLK-----MQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIK
        MK  R  VM F+LHTSLLLLFF+S+I +S +S M PN  H  SNECL A PSNRKLK     ++D + S+P RKNVRV NVNLYDYSPIDPVPSSKRSIK
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLK-----MQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIK

Query:  HGPIEHGSPLIPHMPNPSPPDQPQPGGFV
        HGPIEH SPLIP+MPNPSPPDQPQPGGFV
Subjt:  HGPIEHGSPLIPHMPNPSPPDQPQPGGFV

A0A6J1IVH6 uncharacterized protein LOC111480980 isoform X21.9e-4175Show/hide
Query:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VM F+LHTSLLL FF+S+I +S +S M PN  H  SNECL A PSN+KLK+QD + S+P RKNVRV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQPGGFV
        H SPLIP+MPNPSPPDQPQPGGFV
Subjt:  HGSPLIPHMPNPSPPDQPQPGGFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein1.1e-0753.7Show/hide
Query:  VNLYDYS-PIDPVPSSKRSIKHGPIEHGSPLIPHMPNP------SPPDQPQPGG
        V L DY+ P+DP P++K SIK GPIEHG+PL P++P P       PP Q Q GG
Subjt:  VNLYDYS-PIDPVPSSKRSIKHGPIEHGSPLIPHMPNP------SPPDQPQPGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCTTTTAGGTTTCCGGTTATGCCTTTTCTGCTTCACACTTCTTTATTGCTGCTTTTCTTTACCAGCAATATCAATGCCTCTTTAACTTCCGCAATGGCTCCAAA
CCACCTCCATGGTGAATCAAATGAATGTTTGTTTGCCAAACCATCAAACAGGAAGCTGAAAATGCAGGATTACGAGCATAGTAACCCGACGAGGAAGAATGTCCGTGTGG
GTAACGTAAATCTTTACGACTACAGCCCCATTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCA
AATCCTTCCCCTCCTGATCAACCTCAGCCTGGTGGTTTTGTGTAG
mRNA sequenceShow/hide mRNA sequence
CGTCCATGCCACATAACATTATTATTTATTACAAAACAATTAAATCTTCTGCTTGCTTTATTTCATTTATTCACTTTCCGACAGAATTAAATGTCAAAACAAATCTCCAT
TGTTCTTCCGACATCCTCATCGACAACCAGTTTTGAAGGGCTTCCTCCCAAAAAGAGTGTTTTGAAGAAGAGGGTGTTTTCTTCTTTTCAAATTTTTGGGTATTATTCTG
ATTTGGAGTGATCTTCTTAGCACTGTGTTTGTGGGCATTTGGACGTTATGAAGTCTTTTAGGTTTCCGGTTATGCCTTTTCTGCTTCACACTTCTTTATTGCTGCTTTTC
TTTACCAGCAATATCAATGCCTCTTTAACTTCCGCAATGGCTCCAAACCACCTCCATGGTGAATCAAATGAATGTTTGTTTGCCAAACCATCAAACAGGAAGCTGAAAAT
GCAGGATTACGAGCATAGTAACCCGACGAGGAAGAATGTCCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATTGATCCAGTTCCAAGCTCAAAGAGATCCATAA
AACATGGACCAATAGAGCATGGCTCTCCTCTTATACCTCATATGCCAAATCCTTCCCCTCCTGATCAACCTCAGCCTGGTGGTTTTGTGTAGAGAGCAGATACCTTTCTC
TCTACTACTTGCTATAAATAAACTGAAATTTGTTTATTATATATAAAACCAGCTATGTTAACTGTCATCGTCTCTACGTAAATACTTGCGACTCGTATTATCTACCGTAC
TAAAAAAGAAGTGCTGGAATGATGTATTAGGAAATGAATGTATTTGTAGTAGATCTTGTCTATTTATACCACATATAGTTTGGTTGAAGAGTTGTTTTACTTGTTTTATG
AATCTATATGGGTTAGCCATTTTTGTTGGAA
Protein sequenceShow/hide protein sequence
MKSFRFPVMPFLLHTSLLLLFFTSNINASLTSAMAPNHLHGESNECLFAKPSNRKLKMQDYEHSNPTRKNVRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMP
NPSPPDQPQPGGFV