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Lsi04G014990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G014990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description4F5 domain-containing protein
Genome locationchr04:22670161..22671304
RNA-Seq ExpressionLsi04G014990
SyntenyLsi04G014990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK34204.1 unknown [Medicago truncatula]1.5e-0750.65Show/hide
Query:  MGGGNGQKAKMARERNLEKQK-SSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC
        MGGGNGQKAKMARERNLEKQK + +G+Q                     ++S+ N+VQG+HA+IY+++IR EVQG C
Subjt:  MGGGNGQKAKMARERNLEKQK-SSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC

KAF9687510.1 hypothetical protein SADUNF_Sadunf02G0101100 [Salix dunnii]1.6e-0646.34Show/hide
Query:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTCRSKAPK
        MGGGNGQKAKMARE+NLEKQK                       AG+K       VQG++ADI+++N   E+QG CRS+AP+
Subjt:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTCRSKAPK

QHO10435.1 uncharacterized protein DS421_15g489730 [Arachis hypogaea]6.6e-0850Show/hide
Query:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQE-SHDNTVQGMHADIYMYNIRGEVQGTCRSKAP
        MGGGNGQKAKMARE+NLEKQK+++G+Q  +           L   G+    +    +QGMHADIY+++IR EVQG  RS+ P
Subjt:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQE-SHDNTVQGMHADIYMYNIRGEVQGTCRSKAP

TYI75713.1 hypothetical protein E1A91_D06G026200v1 [Gossypium mustelinum]1.6e-0646.05Show/hide
Query:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC
        MGGGNGQK++MARE+++EK K ++G+Q           E++ ++   + +   + VQG+HADI+M++IRGEVQGTC
Subjt:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC

XP_038700180.1 uncharacterized protein At2g23090-like isoform X3 [Tripterygium wilfordii]1.1e-0548.68Show/hide
Query:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC
        MGGGNGQKAKMARE+NLEK K ++G+Q  T  ++   S   ++ A          VQG++ADI+++  RGEVQG C
Subjt:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC

TrEMBL top hitse value%identityAlignment
A0A5D2UGC5 4F5 domain-containing protein7.9e-0746.05Show/hide
Query:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC
        MGGGNGQK++MARE+++EK K ++G+Q           E++ ++   + +   + VQG+HADI+M++IRGEVQGTC
Subjt:  MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC

I3S1R2 4F5 domain-containing protein7.2e-0850.65Show/hide
Query:  MGGGNGQKAKMARERNLEKQK-SSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC
        MGGGNGQKAKMARERNLEKQK + +G+Q                     ++S+ N+VQG+HA+IY+++IR EVQG C
Subjt:  MGGGNGQKAKMARERNLEKQK-SSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCATCCAGAGGTAATCAACCTGCCACTCAATTTTCTCAGTTTGGCTC
CTCAGAAAATGATTTGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACATCAGAGGTGAAGTGCAGG
GAACATGCAGAAGCAAGGCACCCAAAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGGCAATGGCCAGAAGGCTAAAATGGCTCGGGAGAGAAACCTGGAGAAACAAAAGTCATCCAGAGGTAATCAACCTGCCACTCAATTTTCTCAGTTTGGCTC
CTCAGAAAATGATTTGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACATTTATATGTACAACATCAGAGGTGAAGTGCAGG
GAACATGCAGAAGCAAGGCACCCAAAATCTGATGTATATGCTTGTTTTCCTCATCTTAAGAAATGATTCCAAACTCTTAACCCCCACATATGAATTATTACCTATCAATC
AACTCATAGCTTTATCCTTTCCTTCTCTTTTGCAATATTAAAGCCTTCCCAAATGCTCTAGAGGCTACACGCCTTTCAATGTAATAATAACATATGCTTGTGCTCAAAAA
ATATATTTTGATAAAGATCCAACATTTATTTCTTATTTTTCTTTACTTGAACAACTAGAACTGTAGATCAACTTGCAAATGTTTGGCGAATGTTTCTAATAATTAATCGC
CTAACACTTGTAGAAAATATGTTTTGCAAATTTTCCAATAGTATTGGTCAATGATTTCAAAATCTGATCGGATTGAACATAATTGAGTTATTGTCTTTAGAGATTAATAG
TTTGGTATTTTGGCTGCCTAATTTTG
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMARERNLEKQKSSRGNQPATQFSQFGSSENDLKSAGNKQESHDNTVQGMHADIYMYNIRGEVQGTCRSKAPKI