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Lsi04G015090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G015090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:22720693..22720947
RNA-Seq ExpressionLsi04G015090
SyntenyLsi04G015090
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064426.1 hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa]5.9e-2083.33Show/hide
Query:  MEARVLLLMAVITLLVSGDNKATMG--VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPN
        MEAR+LLLMAVITLLVSG+NKATMG  VALVD+HPLSNMQEKHRKHL  LSSPP  SH FNALFASKRK  N
Subjt:  MEARVLLLMAVITLLVSGDNKATMG--VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPN

KAE8649873.1 hypothetical protein Csa_012848, partial [Cucumis sativus]5.1e-2484.29Show/hide
Query:  ITLLVSGDNKATMG---VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR
        ITLLVSGDNKATMG   VA +D+HPLSNMQEKHRKHL  LSSPPP SH FNALFASKRKVPNTWDP+HNR
Subjt:  ITLLVSGDNKATMG---VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR

KDP41663.1 hypothetical protein JCGZ_16070 [Jatropha curcas]7.7e-0439.29Show/hide
Query:  MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR
        M F    + ++++L+ + +LLVSG+ + TM V   D+      QEKH++             SF+ LF+SKRKVPN  DPLHNR
Subjt:  MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR

TrEMBL top hitse value%identityAlignment
A0A067L375 Uncharacterized protein3.7e-0439.29Show/hide
Query:  MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR
        M F    + ++++L+ + +LLVSG+ + TM V   D+      QEKH++             SF+ LF+SKRKVPN  DPLHNR
Subjt:  MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR

A0A0A0KZW1 Uncharacterized protein5.7e-2985.19Show/hide
Query:  MEARVLLLMAVITLLVSGDNKATMG---VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR
        MEAR+LLLMAVITLLVSGDNKATMG   VA +D+HPLSNMQEKHRKHL  LSSPPP SH FNALFASKRKVPNTWDP+HNR
Subjt:  MEARVLLLMAVITLLVSGDNKATMG---VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR

A0A5D3D9C5 Uncharacterized protein2.8e-2083.33Show/hide
Query:  MEARVLLLMAVITLLVSGDNKATMG--VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPN
        MEAR+LLLMAVITLLVSG+NKATMG  VALVD+HPLSNMQEKHRKHL  LSSPP  SH FNALFASKRK  N
Subjt:  MEARVLLLMAVITLLVSGDNKATMG--VALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPN

A0A5N5GV11 Uncharacterized protein8.3e-0439.02Show/hide
Query:  VLLLMAVITLLVSGDNKATMGVALVDEHPLS--------NMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR
        VL+++  + +LVSGD + TM + L ++H  S          QE +++    L+S     HS  A F+SKR+VPN  DPLHNR
Subjt:  VLLLMAVITLLVSGDNKATMGVALVDEHPLS--------NMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTCCACTCTCCATGGAAGCTCGGGTGCTTCTGTTAATGGCGGTTATCACTCTTCTGGTCTCCGGTGATAACAAAGCGACAATGGGGGTTGCCCTCGTCGATGA
ACATCCACTGTCAAACATGCAGGAGAAGCACCGGAAGCATCTGCCGTCCCTGTCGTCGCCCCCGCCGTGGAGTCACTCGTTCAATGCTCTCTTTGCAAGCAAGAGGAAGG
TTCCAAACACTTGGGATCCGCTCCACAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTCCACTCTCCATGGAAGCTCGGGTGCTTCTGTTAATGGCGGTTATCACTCTTCTGGTCTCCGGTGATAACAAAGCGACAATGGGGGTTGCCCTCGTCGATGA
ACATCCACTGTCAAACATGCAGGAGAAGCACCGGAAGCATCTGCCGTCCCTGTCGTCGCCCCCGCCGTGGAGTCACTCGTTCAATGCTCTCTTTGCAAGCAAGAGGAAGG
TTCCAAACACTTGGGATCCGCTCCACAATCGTTGA
Protein sequenceShow/hide protein sequence
MPFPLSMEARVLLLMAVITLLVSGDNKATMGVALVDEHPLSNMQEKHRKHLPSLSSPPPWSHSFNALFASKRKVPNTWDPLHNR