; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G015240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G015240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFormin-like protein 20
Genome locationchr04:22857837..22859033
RNA-Seq ExpressionLsi04G015240
SyntenyLsi04G015240
Gene Ontology termsNA
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK20174.1 formin-like protein 20 [Cucumis melo var. makuwa]5.1e-8873.59Show/hide
Query:  NGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLL
        NGK D CLRSQA     +DRCYNLEDTEP  TEYSCVLIYGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRND+VIGSLR+QLQ L
Subjt:  NGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLL

Query:  LSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP
        LS+G+VDSTWTL KTD RPAGY+RLT+Q P+SS RL+RQDSYYTAP        E + TQRPILHQLLPY   PPP PTQPN +  AALWSQFLPYGSPP
Subjt:  LSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP

Query:  PAASA-SAFTAPPAGYPLPEYPIYPPPPPGT
        P ASA +  TAPPAG     YPI+PPPPPG+
Subjt:  PAASA-SAFTAPPAGYPLPEYPIYPPPPPGT

XP_008452599.1 PREDICTED: formin-like protein 20 [Cucumis melo]5.8e-8475.23Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG
        VDRCYNLEDTEP  TEYSCVLIYGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRND+VIGSLR+QLQ LLS+G+VDSTWTL KTD 
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG

Query:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP
        RPAGY+RLT+Q P+SS RL+RQDSYYTAP        E + TQRPILHQLLPY   PPP PTQPN +  AALWSQFLPYGSPPP ASA +  TAPPAG  
Subjt:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP

Query:  LPEYPIYPPPPPGT
           YPI+PPPPPG+
Subjt:  LPEYPIYPPPPPGT

XP_011654133.2 actin cytoskeleton-regulatory complex protein PAN1 isoform X2 [Cucumis sativus]2.9e-8372.27Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG
        VDRCYNLEDTEP  T+YSCVL+YGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRN++VIGSLRVQLQ L+ +G+VDSTWTL KTDG
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG

Query:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP
        RPAGY+RLT+Q P+SS RL+RQDSYYTAP        E D TQRPIL+ LLPY A PPP PTQPN +  AALWSQFLPYGSPPP  SA +  TAPPAGYP
Subjt:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP

Query:  LPE----YPIYPPPPPGTFF
        +      YPI+ PPPPG+ F
Subjt:  LPE----YPIYPPPPPGTFF

XP_038897490.1 formin-like protein 7 isoform X1 [Benincasa hispida]1.3e-8063.16Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPC-----------------------------------SGRGTHPVFEERFVFEFTERVVEFNIWVLANK
        VDRCYNLEDTEP  TEYSCVL YG S RRTRPC                                    GRGTHPVFEE+FVFEFTERV+E NIWVLANK
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPC-----------------------------------SGRGTHPVFEERFVFEFTERVVEFNIWVLANK

Query:  PTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYY-------TAPLEVDATQRPILHQLLPYDALPPPRPTQPN
        P RND+VIGSLRVQLQ L S+GYV+STWTL KTDGRPAGYIRLTLQFP+SS RL+RQDSYY       TAPLE  ATQRPIL+QLLPYDA PPPRP QPN
Subjt:  PTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYY-------TAPLEVDATQRPILHQLLPYDALPPPRPTQPN

Query:  GTGLAALWSQFLPYGSPP-----------PAASASAF-------TAPPAGYPLPEYPIYPPPPPGT
        GTG   LWSQ LPYG+ P           PAA  S F       +APPAGYPL +YPI+PPPPPG+
Subjt:  GTGLAALWSQFLPYGSPP-----------PAASASAF-------TAPPAGYPLPEYPIYPPPPPGT

XP_038897491.1 leucine-rich repeat extensin-like protein 6 isoform X2 [Benincasa hispida]6.2e-8672.73Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG
        VDRCYNLEDTEP  TEYSCVL YG S RRTRPC GRGTHPVFEE+FVFEFTERV+E NIWVLANKP RND+VIGSLRVQLQ L S+GYV+STWTL KTDG
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG

Query:  RPAGYIRLTLQFPSSSFRLQRQDSYY-------TAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP-----------PAASAS
        RPAGYIRLTLQFP+SS RL+RQDSYY       TAPLE  ATQRPIL+QLLPYDA PPPRP QPNGTG   LWSQ LPYG+ P           PAA  S
Subjt:  RPAGYIRLTLQFPSSSFRLQRQDSYY-------TAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP-----------PAASAS

Query:  AF-------TAPPAGYPLPEYPIYPPPPPGT
         F       +APPAGYPL +YPI+PPPPPG+
Subjt:  AF-------TAPPAGYPLPEYPIYPPPPPGT

TrEMBL top hitse value%identityAlignment
A0A1S3BVD9 formin-like protein 202.8e-8475.23Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG
        VDRCYNLEDTEP  TEYSCVLIYGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRND+VIGSLR+QLQ LLS+G+VDSTWTL KTD 
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG

Query:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP
        RPAGY+RLT+Q P+SS RL+RQDSYYTAP        E + TQRPILHQLLPY   PPP PTQPN +  AALWSQFLPYGSPPP ASA +  TAPPAG  
Subjt:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYP

Query:  LPEYPIYPPPPPGT
           YPI+PPPPPG+
Subjt:  LPEYPIYPPPPPGT

A0A5A7V8F4 Formin-like protein 205.5e-8074.52Show/hide
Query:  LEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYI
        LEDTEP  TEYSCVLIYGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRND+VIGSLR+QLQ LLS+G+VDSTWTL KTD RPAGY+
Subjt:  LEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYI

Query:  RLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYPLPEYPI
        RLT+Q P+SS RL+RQDSYYTAP        E + TQRPILHQLLPY   PPP PTQPN +  AALWSQFLPYGSPPP ASA +  TAPPAG     YPI
Subjt:  RLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASA-SAFTAPPAGYPLPEYPI

Query:  YPPPPPGT
        +PPPPPG+
Subjt:  YPPPPPGT

A0A5B7BH20 Putative extensin-like (Fragment)7.5e-2135.8Show/hide
Query:  WNSGMERNGKPDSCLRS------QARYFRL-VDRCYNLEDTEPVETE--YSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPT
        W S +  +  P S   S      Q R   + V  C+ L+DTE +  +  Y C L YGG+  RTR C+  G +P F+E+FVF   E + E N+ V  +   
Subjt:  WNSGMERNGKPDSCLRS------QARYFRL-VDRCYNLEDTEPVETE--YSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPT

Query:  RNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWS
          D  IGS +VQLQ +LS GY DSTW L    GR AG ++L L +  ++   +   SY  AP        P + Q+  Y ALPP   + P+    A  + 
Subjt:  RNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWS

Query:  QFLPYGSPPPAASASAFTAPPAGYPLPEYPIYPP---PPPGTF
           PY S PP ++A     PP+ YP P+   YPP   PPP  +
Subjt:  QFLPYGSPPPAASASAFTAPPAGYPLPEYPIYPP---PPPGTF

A0A5D3D9I0 Formin-like protein 202.5e-8873.59Show/hide
Query:  NGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLL
        NGK D CLRSQA     +DRCYNLEDTEP  TEYSCVLIYGGSMRRTRPC G+G HPVFEE+FVFEFTE+ VE NIWVLANKPTRND+VIGSLR+QLQ L
Subjt:  NGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLL

Query:  LSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP
        LS+G+VDSTWTL KTD RPAGY+RLT+Q P+SS RL+RQDSYYTAP        E + TQRPILHQLLPY   PPP PTQPN +  AALWSQFLPYGSPP
Subjt:  LSNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPL-------EVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPP

Query:  PAASA-SAFTAPPAGYPLPEYPIYPPPPPGT
        P ASA +  TAPPAG     YPI+PPPPPG+
Subjt:  PAASA-SAFTAPPAGYPLPEYPIYPPPPPGT

A0A6J1FKR0 ribonucleoprotein RB97D-like2.4e-6760.85Show/hide
Query:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG
        VDRCYNLED  P  TEY+C+L+YGGS +RTRPC G G+HP+FEE+FVFEF E VVE NIWVL N+ + N + +G LRV+LQ +L NGYVDSTWTL  TDG
Subjt:  VDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDG

Query:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAP-----LEVDATQRPILHQLLPYDALPPPRPT-----------------QPNGTGLAALWSQFLPYGSPPPA
        RPAG IRLTLQFP SS R Q Q S Y AP       V   Q PIL+QLLPYDA PPPRP                  QPNGTG AA WSQFLPYGSP PA
Subjt:  RPAGYIRLTLQFPSSSFRLQRQDSYYTAP-----LEVDATQRPILHQLLPYDALPPPRPT-----------------QPNGTGLAALWSQFLPYGSPPPA

Query:  ASASAF---TAPPAGYPLPEYP-------IYPPPP
        A A A+   T PP GYPLP+YP       IYPP P
Subjt:  ASASAF---TAPPAGYPLPEYP-------IYPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34150.1 Calcium-dependent lipid-binding (CaLB domain) family protein6.3e-2032.56Show/hide
Query:  CYNLEDTEPVETEYSCVLI-YGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRP
        C  L+DTE    +   V++ YGG   RTR C+  G + VF+E+F+F   E + +  + V  +     D  IG+  +QLQ +LS  Y D TWTL    GR 
Subjt:  CYNLEDTEPVETEYSCVLI-YGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLLSNGYVDSTWTLLKTDGRP

Query:  AGYIRLTLQFPSSSFRLQRQDSYYTAPLEVDATQRPILHQLLPYDALPPPRP--TQPNGTGLAALWSQFLPYGSPPPAASASAFTAPPAGYPLPE---YP
        AG ++L L +  +     ++ +Y +AP        P    +  Y A P   P  T P  +G  +L+ Q   Y  P     AS +   P+ YP P    YP
Subjt:  AGYIRLTLQFPSSSFRLQRQDSYYTAPLEVDATQRPILHQLLPYDALPPPRP--TQPNGTGLAALWSQFLPYGSPPPAASASAFTAPPAGYPLPE---YP

Query:  ----IYPPPPPGTFF
             YPPPPP + +
Subjt:  ----IYPPPPPGTFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCATGGAATTCTGGGATGGAACGCAACGGCAAACCAGACAGCTGCTTGAGGTCACAGGCACGTTACTTTAGGCTAGTTGATCGATGCTACAACTTGGAGGACACAGA
GCCAGTTGAGACCGAATACTCATGCGTCCTTATATATGGTGGTTCCATGAGGAGGACCCGACCATGCTCTGGTAGAGGCACACACCCAGTGTTCGAGGAGAGATTCGTTT
TCGAATTCACTGAAAGAGTTGTAGAATTTAACATTTGGGTATTAGCCAATAAGCCCACAAGAAACGATCAAGTTATTGGCTCCCTAAGAGTTCAGCTCCAACTACTACTT
TCCAATGGTTATGTTGATTCCACCTGGACTCTCCTAAAGACAGATGGCAGGCCTGCGGGGTATATACGGCTCACATTGCAATTTCCCTCTTCCAGTTTTAGATTGCAGCG
CCAAGACTCATATTACACAGCTCCTCTGGAAGTAGATGCAACCCAACGGCCGATTTTGCACCAACTCCTACCGTATGATGCCCTTCCACCGCCGAGGCCAACGCAGCCAA
ATGGCACAGGACTCGCCGCTCTTTGGTCCCAATTCCTGCCGTATGGCTCACCACCACCGGCTGCCTCTGCTTCTGCCTTCACTGCTCCCCCTGCAGGCTACCCTCTGCCA
GAGTACCCAATTTATCCTCCCCCTCCACCAGGTACATTTTTCTTATCATGCATGGGTCAAATTATTCAAACCACAACTTAA
mRNA sequenceShow/hide mRNA sequence
AGATCATGGAATTCTGGGATGGAACGCAACGGCAAACCAGACAGCTGCTTGAGGTCACAGGCACGTTACTTTAGGCTAGTTGATCGATGCTACAACTTGGAGGACACAGA
GCCAGTTGAGACCGAATACTCATGCGTCCTTATATATGGTGGTTCCATGAGGAGGACCCGACCATGCTCTGGTAGAGGCACACACCCAGTGTTCGAGGAGAGATTCGTTT
TCGAATTCACTGAAAGAGTTGTAGAATTTAACATTTGGGTATTAGCCAATAAGCCCACAAGAAACGATCAAGTTATTGGCTCCCTAAGAGTTCAGCTCCAACTACTACTT
TCCAATGGTTATGTTGATTCCACCTGGACTCTCCTAAAGACAGATGGCAGGCCTGCGGGGTATATACGGCTCACATTGCAATTTCCCTCTTCCAGTTTTAGATTGCAGCG
CCAAGACTCATATTACACAGCTCCTCTGGAAGTAGATGCAACCCAACGGCCGATTTTGCACCAACTCCTACCGTATGATGCCCTTCCACCGCCGAGGCCAACGCAGCCAA
ATGGCACAGGACTCGCCGCTCTTTGGTCCCAATTCCTGCCGTATGGCTCACCACCACCGGCTGCCTCTGCTTCTGCCTTCACTGCTCCCCCTGCAGGCTACCCTCTGCCA
GAGTACCCAATTTATCCTCCCCCTCCACCAGGTACATTTTTCTTATCATGCATGGGTCAAATTATTCAAACCACAACTTAA
Protein sequenceShow/hide protein sequence
RSWNSGMERNGKPDSCLRSQARYFRLVDRCYNLEDTEPVETEYSCVLIYGGSMRRTRPCSGRGTHPVFEERFVFEFTERVVEFNIWVLANKPTRNDQVIGSLRVQLQLLL
SNGYVDSTWTLLKTDGRPAGYIRLTLQFPSSSFRLQRQDSYYTAPLEVDATQRPILHQLLPYDALPPPRPTQPNGTGLAALWSQFLPYGSPPPAASASAFTAPPAGYPLP
EYPIYPPPPPGTFFLSCMGQIIQTTT