; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G015300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G015300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:22906391..22909472
RNA-Seq ExpressionLsi04G015300
SyntenyLsi04G015300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591394.1 hypothetical protein SDJN03_13740, partial [Cucurbita argyrosperma subsp. sororia]4.0e-7687.5Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
        MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAVFQSLHRARELYRTR QETADVDQLASLFAECAIAEAQPLN
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN

Query:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        PEPT+ N++IS S VVDAHGNSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Subjt:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
XP_004141268.2 uncharacterized protein LOC101216881 isoform X1 [Cucumis sativus]6.5e-7992.31Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL
        MDCSNSD+MEAEF SI AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYR+RLQETADVDQLASLFAECAIAEA QPL
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL

Query:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        NPEPTE N+N+SSSSVVD H NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
Subjt:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
XP_008452582.1 PREDICTED: uncharacterized protein LOC103493565 [Cucumis melo]8.5e-7991.72Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL
        MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPL
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL

Query:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        N EPTEIN+N+SSSSVV+ H NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Subjt:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
XP_022937284.1 uncharacterized protein LOC111443615 [Cucurbita moschata]6.8e-7686.9Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
        MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAVFQSLHRARE+YRTR QETADVDQLASLFAECAIAEAQPLN
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN

Query:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        PEPT+ N++IS S VVDAHGNSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Subjt:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
XP_038896970.1 uncharacterized protein LOC120085161 [Benincasa hispida]5.9e-8092.86Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
        MDCSNS++MEAEF S +AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN

Query:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        PEPTE N+NISSSSVVD HGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSN RKDEHYAYWCAQI
Subjt:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
TrEMBL top hitse value%identityAlignment
A0A0A0KZU1 Uncharacterized protein3.2e-7992.31Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL
        MDCSNSD+MEAEF SI AGE DSV HLL LARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYR+RLQETADVDQLASLFAECAIAEA QPL
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL

Query:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        NPEPTE N+N+SSSSVVD H NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
Subjt:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
A0A1S3BU73 uncharacterized protein LOC1034935654.1e-7991.72Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL
        MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPL
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL

Query:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        N EPTEIN+N+SSSSVV+ H NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Subjt:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
A0A5D3D9E7 Uncharacterized protein4.1e-7991.72Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL
        MDCSNSD+MEAEF SI+AGEGDSV HLL LARQFINQRKPSQALQAVVMAM+TQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA QPL
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEA-QPL

Query:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        N EPTEIN+N+SSSSVV+ H NSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA I
Subjt:  NPEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
A0A6J1FAR2 uncharacterized protein LOC1114436153.3e-7686.9Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
        MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAVFQSLHRARE+YRTR QETADVDQLASLFAECAIAEAQPLN
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN

Query:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        PEPT+ N++IS S VVDAHGNSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Subjt:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
A0A6J1ILE4 uncharacterized protein LOC1114772889.5e-7686.9Show/hide
Query:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN
        MDCS SD+ME EF+S +AGEGDSV  LL LARQFI+QR P+QALQAVVMAMRTQGGDAAV QSLHRARELYRTR QETADVDQLASLFAECAIAEAQPLN
Subjt:  MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN

Query:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
        PEPT+ N++IS S VVDAHGNSILAETGRMQ+VMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCA+I
Subjt:  PEPTEINSNISSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G47830.1 unknown protein3.5e-4664.58Show/hide
Query:  LALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN-PEPTEINSNISSSSVV--DAHGNSIL
        L+ AR+ ++Q +PSQALQAVVMAMR QGGD AV Q L+R RELY+ R+QETA +DQLAS+FAECAI EAQPL   EPT       +   V  DAHG SIL
Subjt:  LALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN-PEPTEINSNISSSSVV--DAHGNSIL

Query:  AETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
         ++GR Q+++DAF+DGSSFICLQCGGLVS HR+DEHYAYWC+ +
Subjt:  AETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI
AT5G47830.2 unknown protein4.1e-3965.04Show/hide
Query:  MAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN-PEPTEINSNISSSSVV--DAHGNSILAETGRMQVVMDAFSDGSSFIC
        MAMR QGGD AV Q L+R RELY+ R+QETA +DQLAS+FAECAI EAQPL   EPT       +   V  DAHG SIL ++GR Q+++DAF+DGSSFIC
Subjt:  MAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLN-PEPTEINSNISSSSVV--DAHGNSILAETGRMQVVMDAFSDGSSFIC

Query:  LQCGGLVSNHRKDEHYAYWCAQI
        LQCGGLVS HR+DEHYAYWC+ +
Subjt:  LQCGGLVSNHRKDEHYAYWCAQI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGTTCGAACTCGGACATCATGGAGGCTGAATTTTCGTCAATCAAAGCCGGGGAAGGCGATTCTGTCCACCACTTACTTGCATTGGCTCGTCAATTCATCAATCA
ACGAAAGCCTTCCCAAGCCCTCCAAGCGGTTGTAATGGCAATGAGAACCCAAGGTGGGGATGCAGCAGTCTTTCAATCTTTGCACCGTGCCCGTGAGCTGTACAGAACTC
GATTACAGGAGACTGCTGATGTTGATCAACTAGCTTCTTTATTTGCAGAGTGTGCTATAGCTGAAGCCCAGCCTCTGAACCCTGAACCTACTGAAATTAACAGTAACATA
TCTAGCTCATCAGTTGTCGATGCTCACGGTAATTCAATACTGGCAGAAACTGGTAGGATGCAAGTTGTTATGGATGCATTCTCAGATGGGAGCAGTTTTATTTGTTTGCA
ATGTGGGGGTCTTGTTAGTAACCATCGCAAAGATGAGCATTATGCATATTGGTGTGCCCAGATCTAA
mRNA sequenceShow/hide mRNA sequence
GGGTGGGGATGCTTATCAGAAGTTGCTAGAACCATCTGGCGATGCTGTAATTTGGGAGCATATTTCAATTATAAAATCGATAATCAAATAGGACGCCAAAAGCCAAAACA
AACTGTGCCCTCGATTTCTCATGTATAAAAGCAACACCTCAAGGTAAATAAATTTCCCGATGATACCATGGACTGTTCGAACTCGGACATCATGGAGGCTGAATTTTCGT
CAATCAAAGCCGGGGAAGGCGATTCTGTCCACCACTTACTTGCATTGGCTCGTCAATTCATCAATCAACGAAAGCCTTCCCAAGCCCTCCAAGCGGTTGTAATGGCAATG
AGAACCCAAGGTGGGGATGCAGCAGTCTTTCAATCTTTGCACCGTGCCCGTGAGCTGTACAGAACTCGATTACAGGAGACTGCTGATGTTGATCAACTAGCTTCTTTATT
TGCAGAGTGTGCTATAGCTGAAGCCCAGCCTCTGAACCCTGAACCTACTGAAATTAACAGTAACATATCTAGCTCATCAGTTGTCGATGCTCACGGTAATTCAATACTGG
CAGAAACTGGTAGGATGCAAGTTGTTATGGATGCATTCTCAGATGGGAGCAGTTTTATTTGTTTGCAATGTGGGGGTCTTGTTAGTAACCATCGCAAAGATGAGCATTAT
GCATATTGGTGTGCCCAGATCTAACTTGTATTCGTGTATCAATCCTCATTCTTGTCTTACCTGGCGAAAAAAATCCTCCAGAACTTGTATTTGTGTCTTTCGATTTGTAC
ATGGCATAGCTGCTTTTATGTTGGCGCGCCTCAGTTGATGATGCTAGCAAGCTAAGGTTTTAAACGGGTGTCGCCAATTGTTGTAAGTGGGTTCTCCCTTGAGTAGCTTG
CAACATCTTCCTCTGTACAAGAGAGATATAAGAAAAGTATAAACATGATCAATTTGGTTTGCCAAGATCATTATGATACATAACTTTTCATTTTAGAAGAAAGTGACCAG
CCCCATATCTGGGCAGAAAATTACTGTGTGGAGGTAACACCTATTTTTCCTTTCCAATCGTATTGCAAGGCCTACCTAGTTTTGCAGATAACATCGACTGGTGATCAATA
CTTGCTATATTTTAAATATTTAATTCTCATGTGGATACTTTTGGGTTTATATTCAATATAGTAAGTCACAGAAGTATTGCTAGC
Protein sequenceShow/hide protein sequence
MDCSNSDIMEAEFSSIKAGEGDSVHHLLALARQFINQRKPSQALQAVVMAMRTQGGDAAVFQSLHRARELYRTRLQETADVDQLASLFAECAIAEAQPLNPEPTEINSNI
SSSSVVDAHGNSILAETGRMQVVMDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCAQI