; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G015610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G015610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein DCL, chloroplastic
Genome locationchr04:23155704..23158724
RNA-Seq ExpressionLsi04G015610
SyntenyLsi04G015610
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]3.4e-11591.11Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE D
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]2.9e-11489.33Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASILKPPPF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN+DEEE +
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]3.4e-11591.11Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE D
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]2.5e-11390.62Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMAS+ KPPPF PFHSLNP+F NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEEED
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPE EKKIGCGIDYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFR
        RK YPLHAESFILRHFRRRR N+R
Subjt:  RKKYPLHAESFILRHFRRRRGNFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]1.6e-12095.15Show/hide
Query:  MVMAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE
        M+MAMASILKPPPF P HSLNPNFFNSSPVILCFPT PMTSFH STRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA+DLA  SEDDDSSEESGNDDEEE
Subjt:  MVMAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE

Query:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRL+PEHEKTILDRLLPYHPESEKKIGCGIDYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
Subjt:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKKYPLHAESFILRHFRRRRGNFRR
        LIRKKYPLHAESFILRHFRRRR NFRR
Subjt:  LIRKKYPLHAESFILRHFRRRRGNFRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein1.4e-11489.33Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASILKPPPF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN+DEEE +
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY +GDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

A0A1S3BVA4 protein DCL, chloroplastic1.7e-11591.11Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE D
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

A0A5A7VDC9 Protein DCL1.7e-11591.11Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE D
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFRR
        RK YPL+AESFILRHFRRRR N RR
Subjt:  RKKYPLHAESFILRHFRRRRGNFRR

A0A6J1BTU2 protein DCL homolog, chloroplastic1.2e-11390.62Show/hide
Query:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED
        MAMAS+ KPPPF PFHSLNP+F NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEEED
Subjt:  MAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEED

Query:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLS EHEKTILDRLLPYHPE EKKIGCGIDYIT GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKKYPLHAESFILRHFRRRRGNFR
        RK YPLHAESFILRHFRRRR N+R
Subjt:  RKKYPLHAESFILRHFRRRRGNFR

A0A6J1IM57 protein DCL homolog, chloroplastic-like8.0e-11086.78Show/hide
Query:  MVMAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE
        MV+AMASILKPPP  P HSLNPN  N+SPVI+CF THPMTSFHPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPA DLA PSED +SSEESGN DEEE
Subjt:  MVMAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE

Query:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        E+WVDWED+ILE+TVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLL YHPE EKKIGCGIDYIT GYHP+FE SRCLFIVRKDGELVDFSYWKC++G
Subjt:  EDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKKYPLHAESFILRHFRRRRGNFRR
        LIRK YPLHAESFILRHF+RRR +F R
Subjt:  LIRKKYPLHAESFILRHFRRRRGNFRR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)7.4e-0481.82Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMV
        WVDWED+IL+DTVPLV FVRM+
Subjt:  WVDWEDKILEDTVPLVGFVRMV

Q42463 Protein DCL, chloroplastic5.2e-6668.33Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTI
        A+KTG EG  IRS    +++LLRKPV+    +    SE+   ++S +E G    + E WVDWED+ILEDTVPLVGFVRM+LHSGKY  GDRLSP+H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTI

Query:  LDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGN
        L RLLPYHPE +KKIG G+DYIT GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRK YPL+A+SFILRHFR+RR N
Subjt:  LDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGN

Q5D869 DNA-directed RNA polymerase V subunit 14.8e-1933.1Show/hide
Query:  PSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFI
        P  +D+ +       +  + +   E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT   H  F  SRC F+
Subjt:  PSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFI

Query:  VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGNFRR
        V  DG   DFSY K +   + KKYP  AE FI ++F + R +  R
Subjt:  VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGNFRR

Q8L557 Protein EMBRYO DEFECTIVE 5141.8e-0542.37Show/hide
Query:  ILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI       HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic3.5e-7060Show/hide
Query:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE
        M++ASI    P A P+         F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E
Subjt:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
         +++VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI  G+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKKYPLHAESFILRHFRRRRGN
        GLI+KKYPL+A+SFILRHFR+RR N
Subjt:  GLIRKKYPLHAESFILRHFRRRRGN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)2.5e-7160Show/hide
Query:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE
        M++ASI    P A P+         F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E
Subjt:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
         +++VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI  G+HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKKYPLHAESFILRHFRRRRGN
        GLI+KKYPL+A+SFILRHFR+RR N
Subjt:  GLIRKKYPLHAESFILRHFRRRRGN

AT1G45230.2 Protein of unknown function (DUF3223)2.1e-7059.56Show/hide
Query:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE
        M++ASI    P A P+         F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E
Subjt:  MAMASILKPPPFA-PFHSLNPNF--FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEE

Query:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
         +++VDWEDKILE TVPLVGFVRM+LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI   +HPDFESSRC+FIVRKDGE+VDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKKYPLHAESFILRHFRRRRGN
        GLI+KKYPL+A+SFILRHFR+RR N
Subjt:  GLIRKKYPLHAESFILRHFRRRRGN

AT2G40030.1 nuclear RNA polymerase D1B3.4e-2033.1Show/hide
Query:  PSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFI
        P  +D+ +       +  + +   E ++L D  P++  +R ++H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+IT   H  F  SRC F+
Subjt:  PSEDDDSSEESGNDDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFI

Query:  VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGNFRR
        V  DG   DFSY K +   + KKYP  AE FI ++F + R +  R
Subjt:  VRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRGNFRR

AT3G46630.1 Protein of unknown function (DUF3223)7.8e-3348.8Show/hide
Query:  DDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYW
        +D +   W + E +IL D  P+    + +LHS +Y  G+RL  E EK ++++LLPYHP S+ KIGCG+D+I    HP F  SRCLF+VR DG  +DFSY 
Subjt:  DDEEEEDWVDWEDKILEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYW

Query:  KCIKGLIRKKYPLHAESFILRHFRR
        KC++  +R KYP HAE FI  HF+R
Subjt:  KCIKGLIRKKYPLHAESFILRHFRR

AT5G62440.1 Protein of unknown function (DUF3223)1.3e-0642.37Show/hide
Query:  ILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI       HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCCATGGCGTCCATTTTGAAGCCACCGCCATTTGCGCCCTTTCACTCCCTAAATCCAAACTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACACA
CCCAATGACGTCGTTTCACCCATCTACTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGTTCTGATTTGCTGCGAAAACCGGTTG
TTCCCCCGGCGAAGGACCTGGCTGGACCATCGGAGGATGACGATAGCAGTGAGGAGAGTGGAAATGACGACGAGGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATT
TTGGAGGATACCGTTCCTCTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGATAG
GTTGCTTCCATATCATCCCGAGAGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGACTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCA
GAAAAGATGGAGAGTTGGTTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAAGTATCCTCTTCACGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGA
CGTAGAGGCAATTTTCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
AGGCCAGAGAATGCGGATTGAAGAGAAATCTCGTAGAATCTCTAAATCCATGAGATTGATGATAATGTGAGTGACCGTTAACAGTTCTTCTTCCTCCGTTTTCTCAGAGA
ATTGGGTGAAAAACCATGCTCCGCAATCGCAGACTACCATCTCAATCTCAATAGTTGCAAATTTAAGCTCCTTGTTTCAATTGAACAAGGGCATGGTCATGGCCATGGCG
TCCATTTTGAAGCCACCGCCATTTGCGCCCTTTCACTCCCTAAATCCAAACTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACACACCCAATGACGTCGTTTCA
CCCATCTACTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGTTCTGATTTGCTGCGAAAACCGGTTGTTCCCCCGGCGAAGGACC
TGGCTGGACCATCGGAGGATGACGATAGCAGTGAGGAGAGTGGAAATGACGACGAGGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACCGTTCCT
CTAGTTGGCTTTGTTAGGATGGTTCTTCACTCTGGAAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGATAGGTTGCTTCCATATCATCC
CGAGAGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGACTGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAGTTGG
TTGACTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAAGTATCCTCTTCACGCAGAAAGCTTCATTCTTAGGCATTTTCGGCGACGTAGAGGCAATTTTCGT
CGGTAACACATGTAAGATCTGTTAACCATACTATTGTATCATTCAATTTCAGGAATTCTTTGAATATCAAAGCTTGAAATTGACCAACCACGCTTGTGTGGTTCTCTTGT
GTTTAATGATTTGAAATGCGCGAATCAAGATGGATATAGGGCATTTTTTGATATGGAATCTTTATTGAATTCATATCATATTAGGTTGTTCAAGTCAGAAAAAAAAATCC
GCTTGTATTTGATCGTGGCTAAAGCAAAATAGTATACTGCAACTAAACTACTTCACTCGACTTCAGCATTAGAGTGCCTTTGGCCATATGGGGATGTAAATTTTGTTTTG
ATCTTTCCATCCTCGACAATTTTAGGTTGAATAACGAACACTGTTGGGCTAGCCGCCTGTGGGATCAATCAGATTTAGTTGTTTTTATGCACTGATATATATGACTTGTG
AGTGGGAGGTGGACAGTTACAATTTTGCCATAATGGGCTATCGAAGCAAGTAGATT
Protein sequenceShow/hide protein sequence
MVMAMASILKPPPFAPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEDWVDWEDKI
LEDTVPLVGFVRMVLHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITTGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRR
RRGNFRR