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Lsi04G015770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G015770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIntraflagellar transport protein
Genome locationchr04:23343778..23344465
RNA-Seq ExpressionLsi04G015770
SyntenyLsi04G015770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]2.7e-6284.31Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S AS  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_008452533.1 PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo]5.8e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_011654103.1 uncharacterized protein LOC101212714 [Cucumis sativus]9.6e-6083.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQR+ HK+ +ERE++NS GGIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA+LESPIS  +PED   SA+ R+ YDVRMADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]2.3e-6183.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S  S  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]3.4e-6589.54Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKNLKE ENMNSG GIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTA L+SPIS  D ED  SSASLRT Y VRMADG+YKAGCAA T
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS QLQIRSSN  EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein4.6e-6083.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQR+ HK+ +ERE++NS GGIAAWNVFD+VKTTTKTPEALM EI AAISN EYARTTA+LESPIS  +PED   SA+ R+ YDVRMADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQLQIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A1S3BU07 uncharacterized protein LOC1034935312.8e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A5A7VF87 Uncharacterized protein2.8e-5779.74Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        M QR+WHK+ + RE++NS GGI  WNVFDNVKTTTKTPEALMAEINAAISN EY RT A+LESPIS   PED   SA+ R+ YDVR+ADGAYKAGC ALT
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        +GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTSQQ+QIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1BP49 uncharacterized protein LOC1110261683.6e-5276.58Show/hide
Query:  KVFVKMPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAG
        KVFV MP RD  KN KEREN+ S GGI AWN FDNV  TTKTPEALMAEINAAIS  EYARTTA LES    A  +D GS ASL   YD RMAD AYKAG
Subjt:  KVFVKMPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAG

Query:  CAALTVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        CAAL VGKLD+ALHSLNVSLSKCPPEK+SAVAKL SLI+LTSQQL  RSSNC EISED
Subjt:  CAALTVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

A0A6J1FLM9 uncharacterized protein LOC1114463521.1e-6183.01Show/hide
Query:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT
        MPQRDWHKN K +ENM+SGGGIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA+LESPIS   P+D  S  S  T YD R+AD AYKAGCAAL 
Subjt:  MPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTHYDVRMADGAYKAGCAALT

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCGGCGCAATAGATTTCTTACAAGAAATCGATCGGCCAATTTGGTATCAGTTTGAGGACGGCAAGGTGTTTGTGAAAATGCCTCAACGAGATTGGCACAAGAA
TTTGAAAGAAAGGGAGAATATGAATTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACTACAACGAAGACTCCTGAAGCTCTAATGGCGGAGATCA
ATGCAGCAATTTCAAATTTCGAATATGCTCGAACCACGGCTTGGTTAGAATCTCCAATTTCTCTCGCTGATCCAGAGGATGTGGGATCTAGTGCGAGTTTAAGAACTCAT
TATGATGTTCGAATGGCGGATGGAGCATACAAGGCAGGTTGTGCAGCATTGACTGTTGGTAAGCTTGATGAGGCTCTTCATTCGTTGAATGTTTCACTTTCGAAATGCCC
GCCTGAGAAGTCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCGCTCACGTCTCAGCAACTCCAAATCAGATCTTCTAATTGCCATGAAATTTCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTCGGCGCAATAGATTTCTTACAAGAAATCGATCGGCCAATTTGGTATCAGTTTGAGGACGGCAAGGTGTTTGTGAAAATGCCTCAACGAGATTGGCACAAGAA
TTTGAAAGAAAGGGAGAATATGAATTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACTACAACGAAGACTCCTGAAGCTCTAATGGCGGAGATCA
ATGCAGCAATTTCAAATTTCGAATATGCTCGAACCACGGCTTGGTTAGAATCTCCAATTTCTCTCGCTGATCCAGAGGATGTGGGATCTAGTGCGAGTTTAAGAACTCAT
TATGATGTTCGAATGGCGGATGGAGCATACAAGGCAGGTTGTGCAGCATTGACTGTTGGTAAGCTTGATGAGGCTCTTCATTCGTTGAATGTTTCACTTTCGAAATGCCC
GCCTGAGAAGTCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCGCTCACGTCTCAGCAACTCCAAATCAGATCTTCTAATTGCCATGAAATTTCAGAAGATTGA
Protein sequenceShow/hide protein sequence
MAFGAIDFLQEIDRPIWYQFEDGKVFVKMPQRDWHKNLKERENMNSGGGIAAWNVFDNVKTTTKTPEALMAEINAAISNFEYARTTAWLESPISLADPEDVGSSASLRTH
YDVRMADGAYKAGCAALTVGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSQQLQIRSSNCHEISED