CuGenDBv2

Gene ID	Lsi04G015900
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	chr04:23417640..23420653
RNA-Seq Expression	Lsi04G015900
Synteny	Lsi04G015900
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009447450.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima]

2.5e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009447535.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata]

2.5e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009751738.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum]

2.5e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009752243.1 photosystem I P700 apoprotein A1 [Trichosanthes baviensis]

2.5e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009753174.1 photosystem I P700 apoprotein A1 [Trichosanthes truncata]

2.5e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LDX9 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

100

Show/hide

Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A2Z2CGB0 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A410HF85 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A6M3RWM8 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

X2F5B1 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-41

100

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

SwissProt top hits

e value

%identity

Alignment

P58310 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-43

97.62

Show/hide

Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP+FAQWIQNTHALAP ITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q06FW5 Photosystem I P700 chlorophyll a apoprotein A1

4.7e-43

97.62

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP  TAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q0G9W2 Photosystem I P700 chlorophyll a apoprotein A1

1.8e-42

96.43

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNW CIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPS TAPGATT TSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

1.2e-43

98.81

Show/hide

Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP ITAPGATTGTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q6EW48 Photosystem I P700 chlorophyll a apoprotein A1

6.1e-43

96.43

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQP+FAQWIQNTHALAPS TAPGAT GTSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.1e-15

44.32

Show/hide

Query:  RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL
        R+L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I ++P+FAQWIQ+ H         L  S + P    G S+
Subjt:  RVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

6.3e-43

94.05

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Query:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
        DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAP +TAPG T  TSLTWG
Subjt:  DRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Sequences

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CDS sequence

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ATGAGTTGGAATGCCACAATAGTAAAAGAGGCTGGAGTCTGTGATTTGATACCAGTCATTCGAAAAGACAACAATGTCAGCGTCGTATTACTGTGTTGTCATGTTGTGTT
TCGCAATGGAAGCTCCTTCGGGTCGCCCGGGCTTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAG
AGAGTTGTCTCGCGCCCCTAAGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATG
GGTTACTTCAGCGCCGTAGCGCCTGGTACTCAAACATTGGCTCGAGATCGTGTACTTAGGCATCGTGATGCAATCATATCACATCTGAACTGGGTGTGTATATTTTTAGG
CTTTCACAGTTTTGGTTTGTATATTCATAATGATACCATGAGTGCTTTAGGGCGTCCCCAAGATATGTTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAAT
GGATACAAAACACCCATGCTTTAGCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGCGGCATCCTGGACTTAATCACTACAAATTGTTT
AGCAAACCCTAA

mRNA sequence

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Protein sequence

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MSWNATIVKEAGVCDLIPVIRKDNNVSVVLLCCHVVFRNGSSFGSPGLGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLSILYLPTCVGFGYRYPFVEGRSSFSWEYGM
GYFSAVAPGTQTLARDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWGRHPGLNHYKLF
SKP

Lsi04G015900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome