; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G016740 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G016740
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionjacalin-related lectin 19-like
Genome locationchr04:24166603..24167481
RNA-Seq ExpressionLsi04G016740
SyntenyLsi04G016740
Gene Ontology termsGO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR033734 - Jacalin-like lectin domain, plant
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041597.1 jacalin-related lectin 19-like [Cucumis melo var. makuwa]6.9e-2950Show/hide
Query:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL
        TLSF P+G++   + WDDGV+  I+   I + G  I AI+ +YEDK GNS+    HG      +I+V LN PDEYLISIHG               I+SL
Subjt:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL

Query:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
        TFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFH++ ISI K
Subjt:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

KAG6607646.1 Jacalin-related lectin 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2350.32Show/hide
Query:  STTLSFIPQGANWWDTKWDDG-VFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT------GLVPGI
        S TL+F  +G+      W+DG VF  ++A +I++ G  I AIQI YEDKDG SIW + HG  N     ++TL   DEYLIS+HG   +           I
Subjt:  STTLSFIPQGANWWDTKWDDG-VFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT------GLVPGI

Query:  QSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISI
        +SLTFETNQRTLGP+GIE   KFSFPT G +KIVGF+G      L  IGFHFV IS+
Subjt:  QSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISI

XP_008466552.1 PREDICTED: jacalin-related lectin 19-like [Cucumis melo]6.9e-2950Show/hide
Query:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL
        TLSF P+G++   + WDDGV+  I+   I + G  I AI+ +YEDK GNS+    HG      +I+V LN PDEYLISIHG               I+SL
Subjt:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL

Query:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
        TFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFH++ ISI K
Subjt:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

XP_031738576.1 jacalin-related lectin 19-like [Cucumis sativus]1.5e-2847.31Show/hide
Query:  KKTEAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----
        K+ + ++  + TLSF P+G++     WDDGV+  I+   I + G  I AI+ +YEDK GNSI    HG      +I++ LN PDEYLIS+HG        
Subjt:  KKTEAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----

Query:  --GLVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
               I+SLTFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFHF+ ISI K
Subjt:  --GLVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

XP_038898662.1 jacalin-related lectin 19-like [Benincasa hispida]1.9e-2647.56Show/hide
Query:  EAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTG
        E K+E   TLSF  +G++     WDDGV+  I+   I + G  I AI+ EYE KDGN+I    HG      +I++ LN P EYLIS+HG           
Subjt:  EAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTG

Query:  LVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
            I+SL+FETN+R+LGP+GIE   KFSFPT G +KIVGF+G  S   L  IGFHF+ ISI K
Subjt:  LVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

TrEMBL top hitse value%identityAlignment
A0A059BP54 Uncharacterized protein4.9e-2047.93Show/hide
Query:  KWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG-----IQSLTFETNQRTLGPYGIE
        +WDDGV+ST+R   I + G  I +IQIEY D  GNSIW + HG    C +  V L+ PDE+LIS+HG    G +       ++SLTFE+N++T GPYG++
Subjt:  KWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG-----IQSLTFETNQRTLGPYGIE

Query:  NVYKFSFPTKGVKIVGFYGDA
            FSFP+   KIVGF+G A
Subjt:  NVYKFSFPTKGVKIVGFYGDA

A0A0A0LG45 Jacalin-type lectin domain-containing protein7.5e-2947.31Show/hide
Query:  KKTEAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----
        K+ + ++  + TLSF P+G++     WDDGV+  I+   I + G  I AI+ +YEDK GNSI    HG      +I++ LN PDEYLIS+HG        
Subjt:  KKTEAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----

Query:  --GLVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
               I+SLTFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFHF+ ISI K
Subjt:  --GLVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

A0A0A0LGM3 Uncharacterized protein7.5e-2147.41Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----GLVPG-IQSLTFETNQRTLGPYGIEN
        W+D +F TIR F + + G  I +IQI+YED +GN +W + HG  +  +  EV L  PDEYL+SIHG        GL    I SLT ETN+++ GP+G+E+
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICT----GLVPG-IQSLTFETNQRTLGPYGIEN

Query:  VYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKI
         +KFSFPT G+K+VG YG  S + L  IG H V I
Subjt:  VYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKI

A0A1S3CRJ0 jacalin-related lectin 19-like3.4e-2950Show/hide
Query:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL
        TLSF P+G++   + WDDGV+  I+   I + G  I AI+ +YEDK GNS+    HG      +I+V LN PDEYLISIHG               I+SL
Subjt:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL

Query:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
        TFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFH++ ISI K
Subjt:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

A0A5A7TIX2 Jacalin-related lectin 19-like3.4e-2950Show/hide
Query:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL
        TLSF P+G++   + WDDGV+  I+   I + G  I AI+ +YEDK GNS+    HG      +I+V LN PDEYLISIHG               I+SL
Subjt:  TLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC------ICTGLVPGIQSL

Query:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK
        TFETN+++LGPYGIE   KFSFPT G +KIVGF+G  S   L  IGFH++ ISI K
Subjt:  TFETNQRTLGPYGIENVYKFSFPTKG-VKIVGFYGDASNVALYKIGFHFVKISIPK

SwissProt top hitse value%identityAlignment
F4HQX1 Jacalin-related lectin 32.0e-1840.68Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY
        WDDG+++T++   I + G  I +IQIEY DK+G+S+W +  G        +V  ++P EYLIS++G   +  V G   ++SLTFE+N+R  GP+G+++  
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY

Query:  KFSFPTKGVKIVGFYGDA
         F+ P  G KI+GF+G A
Subjt:  KFSFPTKGVKIVGFYGDA

F4I837 Jacalin-related lectin 143.3e-1332.87Show/hide
Query:  QGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC---ICTGLVPGIQSLTFETNQRTL
        QG N  D+ WDDGVF  +R   +    + +  +++ Y+      I +D HG      + E  L +P EY+ ++ GC   +    V  I  L  +TN+RT 
Subjt:  QGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC---ICTGLVPGIQSLTFETNQRTL

Query:  GPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS
         P G E+   F    +G KIVGF+G ASN+ + ++G H V ++
Subjt:  GPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS

O65187 Myrosinase-binding protein 11.9e-1332.67Show/hide
Query:  STTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC---ICTGLVPGIQSLT
        STT     +G N     WDDGVF  +R   +      +  +  EY +K   +I  D HG           L++P EY+ S+ G    I       + SLT
Subjt:  STTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGC---ICTGLVPGIQSLT

Query:  FETNQRTLGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKI
        F+TN+RT  P+G+     F     G K+VGF+G A ++ +++IG H V I
Subjt:  FETNQRTLGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKI

O80736 Jacalin-related lectin 172.5e-1336.76Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG-----IQSLTFETNQRTLGPYGIEN
        WDDG F  IR   I +    I  ++  Y DKD   +  D HG      + E  L HPDEYLIS+ G     +V G     I+ L F+TN RT   +G E 
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG-----IQSLTFETNQRTLGPYGIEN

Query:  VYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS
           F+   +  KIVGF+G    + L++IG H + I+
Subjt:  VYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS

Q9SSM3 Jacalin-related lectin 195.2e-1938.78Show/hide
Query:  PQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGL---VPGIQSLTFETNQRT
        P G N   T WDDG++  +R  R+ YD H I +I + Y DK+G     + HG V      E+ L +P+EYL  + G  C  +    P I+S+TF++N++ 
Subjt:  PQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGL---VPGIQSLTFETNQRT

Query:  LGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKISIPK
         GPYG+E    F+F   G +IVG  G  S   L  IGFH   +S PK
Subjt:  LGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKISIPK

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein1.4e-1940.68Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY
        WDDG+++T++   I + G  I +IQIEY DK+G+S+W +  G        +V  ++P EYLIS++G   +  V G   ++SLTFE+N+R  GP+G+++  
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY

Query:  KFSFPTKGVKIVGFYGDA
         F+ P  G KI+GF+G A
Subjt:  KFSFPTKGVKIVGFYGDA

AT1G19715.2 Mannose-binding lectin superfamily protein3.2e-1638.6Show/hide
Query:  VFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVYKFSF
        +++T++   I + G  I +IQIEY DK+G+S+W +  G        +V  ++P EYLIS++G   +  V G   ++SLTFE+N+R  GP+G+++   F+ 
Subjt:  VFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVYKFSF

Query:  PTKGVKIVGFYGDA
        P  G KI+GF+G A
Subjt:  PTKGVKIVGFYGDA

AT1G19715.3 Mannose-binding lectin superfamily protein1.4e-1940.68Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY
        WDDG+++T++   I + G  I +IQIEY DK+G+S+W +  G        +V  ++P EYLIS++G   +  V G   ++SLTFE+N+R  GP+G+++  
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPG---IQSLTFETNQRTLGPYGIENVY

Query:  KFSFPTKGVKIVGFYGDA
         F+ P  G KI+GF+G A
Subjt:  KFSFPTKGVKIVGFYGDA

AT1G61230.1 Mannose-binding lectin superfamily protein2.2e-1733.58Show/hide
Query:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPGIQSLT---FETNQRTLGPYGIENVY
        WDDGV+  +R   +    + I  ++  Y DKD   +  D HG      + E+ L +P EY+ ++ GC   G+   ++S+T   F+TN+RT   +G E+  
Subjt:  WDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGLVPGIQSLT---FETNQRTLGPYGIENVY

Query:  KFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS
         F    +G KIVGF+G ASN+ ++++G H + I+
Subjt:  KFSFPTKGVKIVGFYGDASNVALYKIGFHFVKIS

AT1G73040.1 Mannose-binding lectin superfamily protein3.7e-2038.78Show/hide
Query:  PQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGL---VPGIQSLTFETNQRT
        P G N   T WDDG++  +R  R+ YD H I +I + Y DK+G     + HG V      E+ L +P+EYL  + G  C  +    P I+S+TF++N++ 
Subjt:  PQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNHPDEYLISIHGCICTGL---VPGIQSLTFETNQRT

Query:  LGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKISIPK
         GPYG+E    F+F   G +IVG  G  S   L  IGFH   +S PK
Subjt:  LGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKISIPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCCTTCGCTATCGTTCAATTCCCCTCCACCTAGACCCAGATGAAATAATGTGGTACAAGCTCATTTCGTTGAACCACAAGAAGACAGAGGCCAAAGATGAGTT
GTCGACAACATTGTCGTTTATACCGCAAGGAGCTAATTGGTGGGACACTAAATGGGACGACGGAGTTTTTTCTACAATTAGAGCGTTTCGAATTTACTACGATGGACACT
CTATTACGGCCATTCAGATCGAATATGAGGACAAAGATGGGAACTCAATTTGGAAAGACATACATGGTTATGTAAATAAATGCACACTTATTGAGGTTACTTTAAACCAT
CCTGATGAGTATCTTATTTCAATTCATGGCTGCATTTGCACTGGTTTGGTTCCTGGCATTCAGTCACTAACTTTTGAAACCAACCAAAGAACTTTGGGTCCATATGGAAT
TGAAAATGTATACAAGTTTTCATTCCCAACTAAGGGGGTAAAGATCGTGGGATTCTATGGGGATGCTAGTAATGTTGCGCTTTATAAAATTGGATTCCATTTCGTTAAGA
TTTCAATCCCAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCCCTTCGCTATCGTTCAATTCCCCTCCACCTAGACCCAGATGAAATAATGTGGTACAAGCTCATTTCGTTGAACCACAAGAAGACAGAGGCCAAAGATGAGTT
GTCGACAACATTGTCGTTTATACCGCAAGGAGCTAATTGGTGGGACACTAAATGGGACGACGGAGTTTTTTCTACAATTAGAGCGTTTCGAATTTACTACGATGGACACT
CTATTACGGCCATTCAGATCGAATATGAGGACAAAGATGGGAACTCAATTTGGAAAGACATACATGGTTATGTAAATAAATGCACACTTATTGAGGTTACTTTAAACCAT
CCTGATGAGTATCTTATTTCAATTCATGGCTGCATTTGCACTGGTTTGGTTCCTGGCATTCAGTCACTAACTTTTGAAACCAACCAAAGAACTTTGGGTCCATATGGAAT
TGAAAATGTATACAAGTTTTCATTCCCAACTAAGGGGGTAAAGATCGTGGGATTCTATGGGGATGCTAGTAATGTTGCGCTTTATAAAATTGGATTCCATTTCGTTAAGA
TTTCAATCCCAAAGTAG
Protein sequenceShow/hide protein sequence
MPSLRYRSIPLHLDPDEIMWYKLISLNHKKTEAKDELSTTLSFIPQGANWWDTKWDDGVFSTIRAFRIYYDGHSITAIQIEYEDKDGNSIWKDIHGYVNKCTLIEVTLNH
PDEYLISIHGCICTGLVPGIQSLTFETNQRTLGPYGIENVYKFSFPTKGVKIVGFYGDASNVALYKIGFHFVKISIPK